Science topic

Urinary Tract - Science topic

Urinary Tract is a continuous anatomical tract, including the kidneys, ureters, and urethra, involved in the formation and excretion of urine.
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This is an important step for isolation of hospital pathogens.
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Nosocomial infections, also known as healthcare-associated infections (HAIs), are infections acquired in hospitals or other healthcare facilities. These infections are typically not present or incubating at the time of a patient's admission. Here are the criteria for identifying nosocomial infection
Timing: The infection must occur at least 48-72 hours after admission. Alternatively, the infection could manifest within 10-30 days after discharge, particularly if it is related to a surgical procedure
Location:The infection occurs in a hospital, nursing home, rehabilitation center, outpatient clinic, or other healthcare facility.
  • Microbiological Evidence:The infection is confirmed by laboratory tests such as cultures, serological tests, or other microbiological evidence.
  • Clinical Symptoms:The patient presents symptoms and signs consistent with an infection (e.g., fever, redness, swelling, pain, discharge, etc.).
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What should be the approach in a 6 year old female (Presentation UTI) with left Duplex kidneys and double ureter with HDUN and dilated ureter of upper moiety till lower end ending in an Ureterocele? The Ureterocele is the sphincetric type with the mouth stenotic and opening just at the bladder neck. No reflux into either of the 3 ureteric openings. No back pressure changes in the bladder. DMSA shows L VS R 49/51% and Upper vs Lower moiety 33/67%.
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I'll go with cystoscopic incision, and follow up after 1 month
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Urinary Tract Infection is more likely to occur in young women especially those who are sexually active or pregnant, which puts them at a higher risk for the infection. It can be a single-episode of Urinary Tract Infection or a recurrent UTI. The incidences of Enterococcus faecalis and Escherichia coli shows to be significantly higher in patients with infection than those who had single-episode urinary tract infection. E. faecalis is known to be the most common and make structural changes. Adherent E. coli is also more likely to have an important role in the etiology of young women who have recurrent UTI. Both of these bacteria are known to cause mild to serious diseases. So the question is, what clinical signs and symptoms will distinguish recurrent UTI from a single-episode UTI?
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I agree with the excellent and comprehensive answers from Mary CR Wilson.
Just to add recurrent UTI's occurring in the context of an incomplete course of antibiotics, and /or resistance to the prescribed antibiotic, anatomical bladder abnormalities (diverticulae, calculus), functional -vesico-urethral reflux, renal calyx- pyelonephrosis, calculi, underlying co-morbidities (diabetes) and perimenopausal changes in estrogen levels.
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The gold standard for diagnosing urinary tract infection is through urine culture. However, several studies shows that urine culture is inaccurate wherein the patient may experience symptoms but shows no microorganism in urine culture. The next thing they would do is to obtain sample using catheter collection. However, one of the most common microorganism that causes UTI is Klebsiella pneumoniae which can get through medical equipment such as catheter. If urine culture shows no microorganism with patient who experienced UTI symptoms, is catheter urine collection where Klebsiella pneumoniae can be transferred still recommended?
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If the urine was properly collected, I don't think it is important to get a catheter sample.
Besides klebsiellas are gram negative bacteria which presence causes nitrites in urine plus leucocytes.
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Because there are variety of microorganisms that caused urinary tract infections, there are some myths or statements that common people quickly believed especially those who are not well-informed. Most people who are not studying microbiology only search questions on google or other social media platforms. We all know that not all sources are trustworthy and reliable. With that, some people believe on what they have read and do things that which may be ineffective or might cause more complications to their health. What are the things that common people need to know for them to be well-aware about the bacteria causing urinary tract infections?
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Very good question! It is true nowadays Google has been used to get any informations and sometimes people without scrutinizing results of their search use anything that pops up.
I personally never came across any misconception about E. Coli.
I am very much interested to know!
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Otitis media (OM) and respiratory tract infections are the common infections diagnosed in pediatric emergency and outpatient settings, and occasionally occur in association with urinary tract infection; however, the significance of combined infections in the pathogenesis of urinary tract infection remains unproved. Upper respiratory tract infection and OM occurs in 13–30 % of patients with UTIs . OM
is common worldwide and consists of inflammation of the middle ear drum and the inner ear
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pathogenic bacteria isolated from pregnant women with
urinary tract infection have ability to resist different types of antibiotics
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see above
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Pelvic floor muscle exercise would be an evidence based first line treatment methods for women with urinary incontinence.
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how do we define the quality of life which was measured in the specific-QoL questionnaire? e.g. the Qualiveen Questionnaire.
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Hi,
There is a recent review answering the exact question
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Working on a CAT on recurrent urinary tract infections for my Master NP study
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Hello Lennert,
I hope they are able to send the article that you need.
Again, very best wishes,
Mary
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I am having problem obtaining the desired confluency. They are not growing out well even after 24-72 h incubation. Confluency remains less than 60%
Note: - Media is RMPI 1640 (As recommended by ATCC)
- Cells are new (just ordered from ATTC)
- Seeding rate is 1-2 x10^4 cells/cm^2
- Media color after incubation is orange
Looking forward towards kind replies :)
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Dear Zara,
I worked with these cell lines for several years. These two cells grow very well, Initially it is slow, but later it grow very well if not contaminated with mycoplasma. So far I remember, I used RPMI 1640 for 5736 and DMEM for T24 cells. 10% serum is fine and you don't need anything else. 5736 cells is very sticky to culture plate, very careful for passaging!!! If you need any further help, please mail me: provash2000@gmail.com
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We are doing a urinary tract infection project using mouse as an experimental model. We will be doing fluorescent staining (DAPI, DTAF, mCherry). I have several questions:
1) Do I need to infuse the bladder with NBF, or just immerse it? If immersed, will enough formalin get into the bladder to fix the urothelium?
2) If I use Carnoy's solution (which is supposed to preserve mucins), will it interfere with fluorescence?
3) Will formalin harden up enough (if infused and the bladder urethra tied off to prevent leakage) to view the bladder in a distended condition?
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Hello,
Hope I can help you with your questions.
1) Depends on how long you incubate in formalin the mouse bladder is rather small so eventually the formalin will reach the inner layers and urothelium and fix it. However I think you will have the best results if you perfuse the whole animal with formalin.
2) Depends on your fluorescent dyes. I think Carnoys is acidic and different dyes are more or less sensitive to pH.
3) I do not think formalin will harden (though the tissue will, a little bit), maybe you mean paraffin? We used to infuse the bladder with cryosectioning media before freezing them for sectioning when we wanted to have sections with distended bladders and it worked fine. I think you could try to do the same thing with paraffin.
Have a look at the methods section in our papers it might be helpful :-)
Best regards
Karl Svennersten
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Nocturnal poliuria (more 33% of 24-urine volume)
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 Thank you for your answer!!!
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Can UWIN Score for assessment of lower urinary tract symptoms replace AUASI Score. UWIN is a four-domain new scoring tool 'UWIN' (urgency, weak stream, incomplete emptying and nocturia) and quality of life questionnaire
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Validation of the Urgency, Weak stream, Incomplete emptying, and Nocturia (UWIN) score compared with the American Urological Association Symptoms Score in assessing lower urinary tract symptoms in the clinical setting.
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Which drug can be used as monotherapy in BPH/LUTS . Tadalafil vs Tamsulosin.
Tadalafil was shown to be significantly effective for improving LUTS/BPH. Significant improvements in IPSS and the IIEF score were also observed in patients with comorbid BPH and ED.
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Well in my 40years of work in urology i had the impression that the efficiency of my medication was always so good as the patient believed in it. That' s why i remained in uro-surgery Your Hainz
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Can we use fosfomicyn to treat the especially urinary tract infection with Pseudomonas spp?, some sources is said that there is intrinsic antibiotic resistance against fofomycin in pseudomonas spp.  Besides, fosfomycin is an anbiotic class to determine pseudomonas MDRO and there is not any information about intrinsic resistance on ECDC guidelines (about MDRO 2011). So which one is right? Can we use fosfomycin to pseudomonas in urinary tract?
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The antibacterial spectrum of fosfomycin includes staphylococci, Haemophilus sp. and most of the enteric gram-negative bacteria, but with a considerably higher MIC for Klebsiella sp., Enterobacter sp. and Serratia sp. Fosfomycin is moderately active against Pseudomonas aeruginosa with variable MICs ranging from 4 to >512 mg/L.
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Could you please tell me that what the normal role nanobacteria has in the genesis of renal stones?
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yes i agree particularly in stones
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My main concern is that crystals are not formed or more amount of crystals is formed in this assay.
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The supersaturation of urine with CaOX, the most common component of kidney stones is an important factor in crystallization, with later factors being nucleation, growth and aggregation. Thus if supersaturation or later steps in crystallization can be prevented, then lithiasis should be avoided. Indeed, several measures are usually taken to reduce supersaturation, e.g. increasing fluid intake and medical therapy. Although treatments have improved considerably, it is generally accepted that better strategies for preventing kidney stones have developed.
REFERENCE:
S V Krishna Reddy ,Ahammad Basha Shaik, Suneel Bokkisam. Effect of Potassium Magnesium Citrate and Vitamin B-6 Prophylaxis for Recurrent and Multiple Calcium Oxalate and Phosphate Urolithiasis.
  Korean journal of urology 06/2014; 55(6):411-6. DOI: 10.4111/kju.2014.55.6.411
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Maximum gall stones by cholecystectomy?
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Don't think the  number of stones  have any real clinical relevance. More important is the clinical indications for cholecystectomy.
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Recurrent subcoronal urethrocutaneous fistula after hypospadias repair, how I can treat it?
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According to its size,condition of the surrounding tissues and exprience. You have
1- simple closure after proper dissection of the fistulous tract and excision with a supporting dartos covering
2- a trap door closure.
3- a Matheui likeinverted skin flap.
4-if complex fistula with multiple openings you can use the previous or revert to re construct the urethra
If you like i have photos of all the  abovr of my own work I can show them to you
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medical management of urolithiasis in recurrent stone formation requires estimation of promoters and inhibitors of stone formation in 24 hours urinary and blood evaluation. Can any one give us the best method in collection of 24 hours urinary sample.
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24 hour urine should be kept in refrigerator or long preservation and sodium azide is generally used to prevent any bacterial and fungal growth in it
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I am having difficulty in locating best practice guidelines on the practice of pre-filling urinary bladders prior to the removal of IDCs.
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What is the full term for IDCs ?
If it corresponds to indwelling urinary catheter, we don't use pre-filling urinary bladders but a supervised catheter's ablation protocol. It consists in attention on miction return, and if not, an in-out catheter by nurse all 4 hours until miction recovery.
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Application of estrogen locally per vagina in elderly females suffering of lower urinary tract symptoms showed some improvement of their symptoms with an unknown mechanism of action, and most of studies done in that subject showed only the histological evidence of improved vaginal mucosal layer, but the question is there any evidence of bladder functional and  histological changes. And consequently is there any research about effects of intravesical instillation of oestrogen?
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I was wondering whether the systemic uptake of oestrogen would be, following bladder installation, as the low systemic uptake from vaginal application is one of the benefits of local use.
You are probably aware of the following publications but I have included the references: 
In a Cochrane Review, the work of Kurz et al. 1993 (RCT) is discussed when intravesical estrogen was used 'Intravesical application of estriol in sensory urge incontinence - a prospective study'. (Ref for the Cochrane Review: Cody, June D., et al. "Oestrogen therapy for urinary incontinence in post-menopausal women." Cochrane Database Syst Rev 4 (2009).) The work of Kurz et al. was also included in the 2012 update (ref: Cody, June D., et al. "Oestrogen therapy for urinary incontinence in post-menopausal women." Cochrane Database Syst Rev 10 (2012).) The concept of intravesical estrogen is also mentioned in "Legendre, Guillaume, et al. "Menopause, hormone treatment and urinary incontinence at midlife." Maturitas 74.1 (2013): 26-30" but no detail is given. 
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1 year old boy with parents complaining of ballooning of prepuce. No UTI episodes. What examinations does he need ? What will be the management ?
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The natural history of the prepuce is one thing we do know about, thanks to a number of (much cited) papers. The one most often used is Gairdner's 1949 paper - the fate of the foreskin. He used a probe to separate adhesions around the age of three - thus his figures are not a true reflection of the natural history. This is perhaps where the expectation of a fully retractable foreskin at age 3 comes from.
The studies below show gradual and variable figures. We must also remember that full retractability is a function of two things - a preputial opening large enough for the glans, and a lack of glanular adhesions to the inner prepuce. Thorvaldsen has a mean age of 10.4 years, Oster's cohort had a 48% chance of some preputial adhesions at this age.
Perhaps more accurate are the figures of authors such as Oster (1969 - Danish schoolboys), Thorvaldsen (2005 - Danish again, this article in Danish), Ko (2007 - Taiwanese boys), Kayaba (1996 - Japanese boys), Agarwal (2005 - Indian boys), and Morales Concepcion (2002 Spanish article).
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I wish to use this for my research .
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There are a few tools that might help you. The first is an app for IOS:
There is also a video tutorial available at http://www.youtube.com/watch?v=LplpznnhDmU.
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Research on UTI treatment
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The definition of "new" is questionnable. There are some relatively newer drugs used in some parts of the world, not available in other parts. For example, most of the former USSR countries enjoy the benefits (much better bioavailability and lesser toxicity and side-effects) of soluble Nitrofuran derivate Furazidin (trade name Furamag), first synthesized in Latvia in late 1970's, but those are not available in the Western Europe. I am not aware of the new classes of drugs for treating UTI, sorry
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I need to examine the urinary tract in mice for UTIs and need to extract the kidneys and bladder for histological examination. I planned to fix the tissue samples in 10% NBF for 24 hours, but I have conflicting reports on procedures for storage post-fixation. I've been told to store them in 0.1M PBS, while another colleague has said that she's stored samples in NBF up to 5 days. I've found online resources that say to store in 70% EtOH after washing the tissues well with PBS. What's the best/proper procedure?
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There really is no universal "best or proper" procedure for fixation. Every fixation procedure does lead to some change in the tissue being fixed. As can be seen from all the replies above the fixation procedure will depend on what you need to do with the tissue later. From your question you have mentioned histological examination. For most histological procedures fixation in 10% buffered formalin give adequate morphological preservation for routine H&E as well as most commonly used histochemical staining procedures. But if you are planning Immuohistochemistry / immunofluorescence or any other immunological procedure then it really depends on the antigenic epitope that is being studied and the available antibodies. You may then have to look at the best fixation procedure and if any antigen retrieval etc would be required later. I do not think storing in PBS is a good idea esp since you plan to study UTI. The bacterial growth that is invariably likely esp if your tissue are already infected may vitiate the results.
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Our CT Urogram protocol is made up of three phases, which includes the control, the arterial phase, and the 10Min Delayed phase with the "chaser" (which is an infusion connected immediately after the arterial phase). We have two opinions from two CT clinical specialists in my department. And how does it impact the quality of the study? Any suggestions or references?
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I do not use any protocol in my daily practice. I judge by individual because the indications for CT are not the same. If I suspect renal mass , arterial phase + venous phase is essential and may be 3-5 minute delayed phase. If I suspect obstructive uropathy , venous phase and 10 minute delayed phase is enough.