Xuechun Li's research while affiliated with China Academy of Chinese Medical Sciences and other places

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Publications (5)


A newly identified NLR-like gene participates in bacteria and virus infection possibly through regulating hemocytes apoptosis in shrimp
  • Article

March 2022

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47 Reads

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5 Citations

Developmental & Comparative Immunology

Xuechun Li

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The nucleotide-binding oligomerization domain (NOD)-like receptors (NLRs) play important roles in innate immunity. Previously, we identified an NLR-like gene, LvNLRPL1, and found that it participated in Vibrio infection and regulated hemocytes apoptosis in the Pacific whiteleg shrimp Litopenaeus vannamei. However, it is still unclear whether other NLR-like genes exist in shrimp and how they function during virus infection. In the present study, a novel NLR-like gene (LvNLRPL2) was identified and functionally characterized in L. vannamei. LvNLRPL2 was highly expressed in hemocytes and responsive to both Vibrio parahaemolyticus and white spot syndrome virus (WSSV) infection. Knockdown of LvNLRPL2 could markedly increase the proliferation of Vibrio and the mortality of shrimp infected with V. parahaemolyticus, whereas inhibit in vivo WSSV propagation in shrimp, indicating its distinct roles during Vibrio and WSSV infection. After LvNLRPL2 knockdown, the apoptotic rate of hemocytes increased, and the expression levels of LvCaspase 2, 3 and 5 were significantly up-regulated. In addition, LvNLRPL2 could form a hetero-dimer with LvNLRPL1 through their NACHT domains. These results suggest that LvNLRPL2 might resist bacterial infection while promote WSSV propagation by forming hetero-dimer with LvNLRPL1 and then inhibiting apoptosis of hemocytes. These data will be helpful for understanding the function of NLR-like genes and their regulation mechanisms in crustaceans.

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Sequence information and tissue expression pattern of LvTRIM9-1. (A) Deduced amino acid sequence of LvTRIM9-1. The RING domain was marked in gray. B-Box domains were bolded underlined. Coiled-coil and COS domains were marked in box. The FN3 domain was waved underlined. The SPRY domain was dotted underlined. (B) Schematic diagrams of LvTRIM9-1 and LvTRIM9. The RING, B-box, Coiled-coil, COS, FN3, and SPRY domains are illustrated. (C) Phylogenetic analysis of Class I TRIM proteins across animal phyla based on protein sequences. Different TRIM proteins were classified into seven branches shown with different colors (green, Chordata TRIM18; red, Chordata and Hemichordata TRIM1; yellow, Chordata TRIM46; purple, Chordata TRIM36; blue, Chordata TRIM67; pink, Chordata TRIM9; black, TRIM9 in non-vertebrate animal phyla). LvTRIM9 was marked with a red triangle, and LvTRIM9-1 was marked with a blue five-pointed star. The TRIMs were shown with UniprotKB/Swiss-Prot or GenBank accession numbers listed in Table S2 . The neighbor-joining phylogenetic tree was built by MEGA 6, with bootstrap of 1000. (D) Expression patterns of LvTRIM9-1 in different tissues of L. vannamei. The 18S rRNA gene was used as the internal reference. Hc, hemocytes; Oka, lymphoid organ; Hp, hepatopancreas; Gi, gill; In, intestine; Epi, epidermis; Ms, muscle; St, stomach; Ht, heart. (E) Localization of LvTRIM9-1 transcripts in lymphoid organ of L. vannamei. Hematoxylin–eosin (H&E) staining (HE) and sense probe (sense) were used as control of the antisense probe hybridization (antisense).
LvTRIM9-1 is beneficial for WSSV infection in lymphoid organ. (A) Expression levels of LvTRIM9-1 in the lymphoid organ of shrimp at different time post-WSSV challenge. PBS stands for PBS injection group, and WSSV stands for WSSV injection group. (B) Inhibition efficiency of LvTRIM9-1 dsRNA. Expression levels of LvTRIM9-1 in the lymphoid organ of LvTRIM9-1 silencing and control shrimp after 0, 24, and 48 h post WSSV infection. (C, D) Amount of WSSV particles in lymphoid organs and epidermis of shrimp at different hours after silencing of LvTRIM9-1 and WSSV infection. dsEGFP, injected with EGFP dsRNA and WSSV; dsTRIM9-1, injected with LvTRIM9-1 dsRNA and WSSV. Stars (*) indicate significant difference (p < 0.05) and (**) indicate extremely significant difference (p < 0.01) of the gene expression levels between the two treatments. All assays described above were biologically repeated for three times.
LvTRIM9-1 enhanced WSSV transcription through activation of the NF-κB pathway. (A–C) The relative expression level of LvRelish, wsv069, and wsv303 in lymphoid organ at different hours after silencing of LvTRIM9-1 and WSSV infection. (D) LvTRIM9-1 activated the NF-κB promoter activity in a concentration-dependent manner. Activation was detected using dual luciferase reporter assays in human HEK293T cells. Results are displayed as the fold change from the control group. Numbers (a, b) indicate extremely significant difference (p < 0.01) of relative luciferase activities among different groups. The expression of LvTRIM9-1 was detected by Western blotting using the anti-His antibody and RT-PCR. Blots were stained with Coomassie brilliant blue (CBB) to verify equal loading. (E–G) The relative expression level of LvRelish, wsv069, and wsv303 in epidermis at different hours after silencing of LvTRIM9-1 and WSSV infection. dsEGFP, injected with EGFP dsRNA and WSSV; dsTRIM9-1, injected with LvTRIM9-1 dsRNA and WSSV. Stars (**) indicate extremely significant differences (p < 0.01) of the gene expression levels between dsEGFP- and dsLvTRIM9-1-treated groups. All assays described above were biologically repeated for three times.
LvTRIM9-1 interacted with LvIMD through its SPRY domain. (A, B) Determination of the interaction between LvTRIM9-1 and LvIMD or Lvβ-TrCP by a Y2H assay. Y2H assay results showed that LvTRIM9-1 directly interacts with LvIMD but not with Lvβ-TrCP. The colonies were cultured on QDO/X/A plates (-Ade/-His/-Leu/-Trp quadruple dropout media with X-a-Gal and aureobasidin A). pGADT7-T and pGBKT7-p53 were used for the positive control (+); pGADT7-T and pGBKT7-Lam were used for the negative control (-). IMD(AD)+BD, β-TrCP(AD)+BD, and AD+TRIM9-1(BD) were used for the auto-activation detection. IMD(AD), pGADT7-LvIMD; β-TrCP(AD), pGADT7-Lvβ-TrCP; TRIM9-1(BD), pGBKT7-LvTRIM9-1; AD, pGADT7 vector; BD, pGBKT7 vector. (C, D) Determination of the interaction between LvTRIM9-1 and LvIMD by a Co-IP assay. Co-IP results showed that LvTRIM9-1 directly interacts with LvIMD. (C) Anti-V5 Western blot bands show the expression of LvTRIM9-1-V5, and anti-Flag Western blot bands show the expression of LvIMD-Flag. (D) Anti-Flag Western blot bands show the expression of LvTRIM9-1-Flag, and anti-V5 Western blot bands show the expression of LvIMD-V5. (E) Determination of the key region of LvTRIM9-1 involved in LvTRIM9-1 and LvIMD interaction by a Co-IP assay. The sites for mutation of LvTRIM9-1 are also labeled under the domain.
Model for the regulation of NF-κB signaling pathway during WSSV infection by LvTRIM9 and LvTRIM9-1. In the intestine, infection of host cells by WSSV leads to the activation of LvTRIM9, then the upregulated LvTRIM9 interacts with Lvβ-TrCP and inhibits the NF-κB pathway to decrease the production of downstream antimicrobial peptides including LvCrustinA, LvPEN3-1, Lvpenaeidin2b, and Lvpenaeidin4a, which results in WSSV propagation in shrimp. Although WSSV infection also results in the upregulation of LvTRIM9-1, LvTRIM9-1 modulates the NF-κB pathway-mediated responses in a different manner. Instead of interaction with Lvβ-TrCP, LvTRIM9-1 interacts with LvIMD via its SPRY domain and activates the NF-κB pathway, which leads to the activation of viral transcriptions including wsv069 and wsv303 for WSSV propagation.
A Novel TRIM9 Protein Promotes NF-κB Activation Through Interacting With LvIMD in Shrimp During WSSV Infection
  • Article
  • Full-text available

February 2022

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116 Reads

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8 Citations

Frontiers in Immunology

Frontiers in Immunology

The TRIpartite Motif (TRIM) proteins play key roles in cell differentiation, apoptosis, development, autophagy, and innate immunity in vertebrates. In the present study, a novel TRIM9 homolog (designated as LvTRIM9-1) specifically expressed in the lymphoid organ of shrimp was identified from the Pacific whiteleg shrimp Litopenaeus vannamei. Its deduced amino acid sequence possesses the typical features of TRIM proteins, including a RING domain, two B-boxes, a coiled-coil domain, a FN3 domain, and a SPRY domain. The transcripts of LvTRIM9-1 were mainly located in the lymphoid tubules of the lymphoid organ. Knockdown of LvTRIM9-1 could apparently inhibit the transcriptions of some genes from white spot syndrome virus (WSSV) and reduce the viral propagation in the lymphoid organ. Overexpression of LvTRIM9-1 in mammalian cells could activate the promoter activity of NF-κB, and an in vivo experiment in shrimp showed that knockdown of LvTRIM9-1 reduced the expression of LvRelish in the lymphoid organ. Yeast two-hybridization and co-immunoprecipitation (Co-IP) assays confirmed that LvTRIM9-1 could directly interact with LvIMD, a key component of the IMD pathway, through its SPRY domain. These data suggest that LvTRIM9-1 could activate the IMD pathway in shrimp via interaction with LvIMD. This is the first evidence to show the regulation of a TRIM9 protein on the IMD pathway through its direct interaction with IMD, which will enrich our knowledge on the role of TRIM proteins in innate immunity of invertebrates.

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Figure 2. SDS-PAGE analysis of rLvCrustinVII. (A) Recombinant expression of rLvCrustinVII at each time point after IPTG induction. Lane M, protein Marker; Lane 1, total protein of E. coli before IPTG induction; Lane 2, 3 and 4, total protein after IPTG induction for 2 h, 4 h and 6 h. (B) Analysis of the expression form of rLvCrustinVII. Lane M, the protein Marker; Lane 1, the supernatant of E. coli lysis after IPTG induction for 4 h; Lane 2, the inclusion body of E. coli lysis after IPTG induction
Characterization of the Dual Functions of LvCrustinVII from Litopenaeus vannamei as Antimicrobial Peptide and Opsonin

February 2022

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81 Reads

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4 Citations

Marine Drugs

Crustin are a family of antimicrobial peptides that play an important role in protecting against pathogens infection in the innate immune system of crustaceans. Previously, we identified several novel types of crustins, including type VI and type VII crustins. However, their immune functions were still unclear. In the present study, the immune function of type VII crustin LvCrustinVII were investigated in Litopenaeus vannamei. LvCrustinVII was wildly expressed in all tested tissues, with relatively high expression levels in hepatopancreas, epidermis and lymphoid organ. Upon Vibrio parahaemolyticus infection, LvCrustinVII was significantly upregulated in hepatopancreas. Recombinant LvCrustinVII (rLvCrustinVII) showed strong inhibitory activities against Gram-negative bacteria Vibrio harveyi and V. parahaemolyticus, while weak activities against the Gram-positive bacteria Staphylococcus aureus. Binding assay showed that rLvCrustinVII could bind strongly to V. harveyi and V. parahaemolyticus, as well as the cell wall components Glu, LPS and PGN. In the presence of Ca2+, rLvCrustinVII could agglutinate V. parahaemolyticus and enhance hemocyte phagocytosis. The present data partially illustrate the immune function of LvCrustinVII, which enrich our understanding on the functional mechanisms of crustins and provide useful information for application of this kind of antimicrobial peptides.


The immune function of a NLR like gene, LvNLRPL1, in the Pacific whiteleg shrimp Litopenaeus vannamei

November 2021

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46 Reads

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5 Citations

Developmental & Comparative Immunology

NOD-like receptors (NLRs) are a kind of pattern recognition receptors, which are vital for detection on pathogen-associated molecular patterns (PAMPs) or damage-associated molecular patterns (DAMPs) and then trigger downstream immune responses in vertebrates. Although many NLR like genes have been identified in invertebrates in recent years, knowledge about their immune functions is still very limited. In the present study, a NLR like gene, designated as LvNLRPL1, was identified in Litopenaeus vannamei. It was widely expressed in multiple tissues and responsive to the infection of Vibrio parahaemolyticus. Knockdown of LvNLRPL1 could accelerate the proliferation of Vibrio in the target tissue hepatopancreas and increase the mortality rate of shrimp after Vibrio infection. Meanwhile, knockdown of LvNLRPL1 also up-regulated the expression of Caspase 2, 3 and 5 in hemocytes, which caused apoptosis of more hemocytes. These results indicated that LvNLRPL1 played important immune functions in shrimp during Vibrio infection through regulating the apoptosis of hemocytes in shrimp. To our knowledge, this is the first time to reveal the immune function of a NLR like gene in crustaceans.


A novel cuticle protein involved in WSSV infection to the Pacific white shrimp Litopenaeus vannamei

September 2019

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97 Reads

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24 Citations

Developmental & Comparative Immunology

As the most productive crustacean species in aquaculture, Litopenaeus vannamei is seriously threatened by white spot syndrome virus (WSSV), which has caused huge economic damage in the past decades. Shrimp cuticle proteins are the important components in the frontier target tissues, including cuticle and the chitinous lining of the digestive tract. In present study, a novel cuticle protein gene, named LvCPAP1, was isolated and demonstrated to play an important role in WSSV infection. The deduced amino acid sequence of LvCPAP1 contained a signal peptide and a conserved chitin-binding domain type 2 (ChBD2). Tissue distribution analysis revealed that LvCPAP1 was predominantly expressed in epidermis and stomach. The transcription levels of LvCPAP1 in epidermis and stomach were significantly regulated upon WSSV challenge. DsRNA silencing of LvCPAP1 decreased the in vivo WSSV copy numbers and the death rate of shrimp after WSSV infection, indicating that LvCPAP1 might facilitate WSSV invasion. In addition, the interaction between LvCPAP1 and the major envelop protein VP24 of WSSV was revealed by yeast two-hybrid system and further confirmed by dot blot and pull-down assays. The present study implied that cuticle protein LvCPAP1 might favor the entry process of WSSV, which provided new clues for understanding the role of cuticle proteins during virus infection.

Citations (4)


... The total number of hemocytes in shrimps was detected as previously described [27]. Briefly, 100 µL hemolymph was extracted from the sinus of each shrimp from different groups (dsEGFP group, dsHSSP group, dsHSSP + rMBP-His group, and dsHSSP + rMBP-HSSP-His group), and mixed with the same amount of sterile anticoagulant after 6, 12, and 24 h post-dsRNA injection. ...

Reference:

A Novel Hemocyte-Specific Small Protein Participates in White Spot Syndrome Virus Infection via Binding to Viral Envelope Protein
A newly identified NLR-like gene participates in bacteria and virus infection possibly through regulating hemocytes apoptosis in shrimp
  • Citing Article
  • March 2022

Developmental & Comparative Immunology

... A type I crustin accumulates in damaged tissues in C. maenas, indicating a probable role in wound healing and tissue regeneration [22]. One type VII crustin from L. vannamei not only has antimicrobial activities against both Gram-positive and Gramnegative bacteria but also enhances hemocyte phagocytosis [23]. The expression of a type II crustin in Rimicaris exoculata spatiotemporally correlates with the establishment of ectosymbiotic microbiota [24]. ...

Characterization of the Dual Functions of LvCrustinVII from Litopenaeus vannamei as Antimicrobial Peptide and Opsonin

Marine Drugs

... Some members of the C-I subfamily have both PRY-SPRY domains, while the more ancient members have only SPRY domains. TRIM9 is present in animals, including invertebrates, and has a C-terminal SPRY domain but not PRY domain in shrimp (96,97), human (98), and ducks (Supplementary Table S1). The C-IV TRIM proteins, which expanded in vertebrates (8,9) and have both PRY and SPRY C-terminal domains, split into two distinct subclades (clades E and F), clade E containing the MHC-linked TRIM proteins and clade F containing genes which cluster with members of the TRIM25 locus, to be referred to as the "TRIM25 cluster". ...

A Novel TRIM9 Protein Promotes NF-κB Activation Through Interacting With LvIMD in Shrimp During WSSV Infection
Frontiers in Immunology

Frontiers in Immunology

... As part of core meta-DEGs, Cuticle protein highlights its role in various physiological conditions under stress. A previous study confirmed a significant up-regulation of novel cuticle protein (LvCPAP1) expression in P. vannamei at 12 h after WSSV challenge (Yang et al. 2020). Beta-N-acetylhexosaminidase is important for chitin degradation and carbohydrate synthesis Muschiol et al. 2020). ...

A novel cuticle protein involved in WSSV infection to the Pacific white shrimp Litopenaeus vannamei
  • Citing Article
  • September 2019

Developmental & Comparative Immunology