Weiyi Liu's research while affiliated with Purdue University and other places

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Publications (8)


Supplementary Material
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January 2017

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12 Reads

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Weiyi Liu

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Figure 2. Muscle growth and motor-function defects of MLC-N1ICD mice. (A) Cartoon illustration of Notch activation by Cre in MLC-N1ICD mice. (B,C) Relative gene expression levels in fast (B, gastrocnemius, n = 3) and slow muscles (C, soleus, n = 4). (D) Growth curve of MLC-N1ICD mice (n = 3). (E) TA muscle weight (n = 4). (F) Image of MLC-N1ICD-Td mouse with kyphosis (arrow), note muscles are in red color as labeled by RFP (Td). (G,H) Immunofluorescence images of EDL fiber (G) and quantification of myonucleus numbers (H, n = 3). (I) Survive curve of MLC-N1ICD mice. (J) Exhaustive treadmill exercise test results (n = 4). (K) Gripping strength measurement result of limbs (n = 3). *p<0.05, **p<0.01. Bar graphs indicate mean SEM. DOI: 10.7554/eLife.17355.005 
Figure 5. N1ICD-mdx muscle transcriptomes gained gene signatures enriched in healthy versus DMD human muscles. (A) Cartoon illustration of experiment design for (B-D). (B,C) Gene set enrichment plots from GSEA analysis of the normal human and DMD muscle gene expression database (GDS3027), interrogated with the down-regulated (B) and up-regulated (C) gene sets in N1ICD-mdx versus mdx muscles. FC, fold change. (D) Heatmap results of top 10 commonly up-regulated and down-regulated gene expression in N1ICD-mdx muscles and normal human muscles (GDS3027). (E) Ingenuity analysis of 51 genes that are commonly up-regulated in N1ICD-mdx muscles and normal human muscles (GDS3027). (F) Heatmap results of gene expression in the indicated pathways. FC, fold change in N1ICD-mdx relative to mdx muscles. DOI: 10.7554/eLife.17355.012 The following source data and figure supplement are available for figure 5: Source data 1. Agilent microarray results showing genes up-regulated and down-regulated in N1ICD-mdx versus mdx muscles. DOI: 10.7554/eLife.17355.013 Figure supplement 1. Activation of Notch1 signaling upregulates Gdf11 expression in muscles. DOI: 10.7554/eLife.17355.014 
Figure 8. Summary of stage-dependent effects of Notch1 activation on muscle cell fate choice and myogenesis. Quiescent satellite cells (SCs) are marked as Pax7 +. Expression of MyoD activates SCs, which enter into cell cycle. A subpopulation of the replicated SCs downregulate Pax7 to differentiate. After differentiation, MLC starts to express in myocytes and nascent myotubes, while MCK only starts to express in the multi-nucleated myofibers. Activation of Notch1 in MyoD Cre lineage (Timing 1, T1) blocks differentiation, promotes self-renewal of SCs, which causes absence of skeletal musculature and embryonic lethality; Activation of Notch1 in MLC Cre lineage (T2) induces dedifferentiation of myocytes, and generates Pax7 quiescent SCs. As a consequence, MLC-N1ICD mice show pronounced defects of muscle growth, motor-function and regeneration; Activation of Notch1 in MCK Cre lineage (T3) upregulates expression of Notch ligands on myofiber, which physiological promotes Notch activation in neighboring cells, inducing self-renewal of satellite cells. Thus, it improves muscle regeneration and exercise performance of old and mdx mice. DOI: 10.7554/eLife.17355.020 
Stage-specific effects of Notch activation during skeletal myogenesis

September 2016

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402 Reads

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87 Citations

eLife

ELife digest Muscles do much more than enable the body to move; they are also important organs involved in the metabolism. Conditions ranging from muscular dystrophy to insulin resistance result from problems that affect muscle tissue. Hence, understanding the signaling mechanisms that regulate how muscles develop and work will be critical to improving muscle-related health conditions. To form and repair muscles, muscle progenitor cells develop (or differentiate) into new muscle cells, which then fuse to form muscle fibers. A signaling pathway involving a protein known as Notch regulates how cells communicate during development, and has been shown to play a key role in muscle progenitor cells. However, it was not known what role Notch signaling plays in the differentiated muscle cells. Bi, Yue et al. have now studied genetically modified mice in which Notch signaling could be manipulated in certain types of cells. In mice with increased Notch signaling in both their newly differentiated muscle cells and muscle fibers, any unfused muscle cells were forced to return to an undifferentiated state, a process called dedifferentiation. This led to the muscles wasting away and resulted in the mice dying young. By contrast, in mice that only experienced activated Notch signaling in their muscle fibers, no dedifferentiation was seen. However, aged and dystrophic muscles in these mice regained the ability to contract and regenerate. Bi, Yue et al. hope that these findings will transform into new strategies to activate or inactivate Notch signaling at different stages of muscle development or regeneration. This could help to repair muscles under various disease conditions. DOI: http://dx.doi.org/10.7554/eLife.17355.002



Figure S2

July 2013

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15 Reads

miR-133a inhibits adipocyte browning in SAT. SAT SVFs were transfected with synthetic miRNA133a by electroporation and cultured to confluence, followed by adipogenic induction and differentiation for 4 days each. (A–C) qPCR analysis of miR-133a and the brown markers after cells were differentiated. N = 3, *P<0.05, **P<0.01. (TIF)



Figure S3

July 2013

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21 Reads

Knockdown of miR-133a upregulates UCP1 expression. Depots of asWAT and ingWAT were harvested from widltype (WT) and miR-133a knockdown (KO; miR-133a1−/−a2+/−) mice that were housed at room temperature or at 4°C for 5 days. Pictured are representative Western Blot images showing the relative expression levels of UCP1. Beta-Actin is used as internal control for protein input. (TIF)


Distinct populations of adipogenic and myogenic Myf5-lineage progenitors in white adipose tissues

June 2013

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399 Reads

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91 Citations

Journal of Lipid Research

Brown adipose tissues (BAT) are derived from a Myf5-expressing cell lineage and white adipose tissues (WAT) predominantly arise from non-Myf5 lineages, though a subpopulation of adipocytes in some WAT depots can be derived from the Myf5-lineage. However, the functional implication of the Myf5 and non-Myf5 lineage cells in WAT is unclear. We found that the Myf5-lineage constitution in subcutaneous WAT depots is negatively correlated to the expression of classical BAT and newly defined beige/brite adipocyte-specific genes. Consistently, FACS-purified Myf5-lineage adipo-progenitors give rise to adipocytes expressing lower levels of BAT-specific Ucp1, Prdm16, Cidea and Ppargc1a genes and beige adipocyte-specific CD137, Tmem26 and Tbx1 genes compared to the non-Myf5-lineage adipocytes from the same depots. Ablation of the Myf5-lineage progenitors in WAT stromal vascular cell cultures leads to increased expression of BAT and beige cell signature genes. Strikingly, the Myf5-lineage cells in WAT are heterogeneous and contain distinct adipogenic (Sca1+) and myogenic (Sca1-) progenitors. The latter differentiate robustly into myofibers in vitro and in vivo, and restore dystrophin expression after transplantation into mdx mouse, a model for Duchenne muscular dystrophy. These results demonstrate the heterogeneity and functional differences of the Myf5- and non-Myf5-lineage cells in the white adipose tissue.

Citations (3)


... Myogenesis comprises sequential activation, proliferation, self-renewal of myoblasts (and satellite cells), their subsequent differentiation and fusion to form myofibers, the basic unit of muscle tissue (Bi et al. 2016). Thus, myogenesis is the orchestration of local cell specification and differentiation in multipotent embryonic progenitors stemming from integrating time-sensitive gene expression with local cell-to-cell communications. ...

Reference:

Review: myogenic and muscle toxicity targets of environmental methylmercury exposure
Stage-specific effects of Notch activation during skeletal myogenesis

eLife

... For example, beige adipocytes emerging during postnatal development in inguinal WAT of mice are derived from Myf5-negative precursors 10 . In addition, cells with a unique gene expression signature -expressing Acta2 (encoding smooth muscle actin (αSMA)), Sm22, Pax3, Cd81 and Pdgfra -were identified in the stromal vascular fraction of WAT as precursors of beige adipocytes following cold exposure 12,[17][18][19][20] . Chronic cold exposure up to 2 weeks also stimulates beige adipogenesis from progenitors expressing Myh11 (reF. ...

A heterogeneous lineage origin underlies the phenotypic and molecular differences of white and beige adipocytes
  • Citing Article
  • September 2013

Development

... BAT and skeletal muscle have shared metabolic features and embryonic origins. Genetic fate mapping experiments in mice demonstrate that the dermomyotome regions of the somites, marked by the expression of transcription factors including Pax3, Pax7, Meox1, and Myf5, gives rises to most fat cells within the interscapular and retroperitoneal adipose depots [15][16][17][18][19][20]. The fact that these lineages trace to dorsal-anterior-located muscle, brown and white adipocytes suggests that they are location markers, rather than identity markers. ...

Distinct populations of adipogenic and myogenic Myf5-lineage progenitors in white adipose tissues

Journal of Lipid Research