Takeshi Shigenaga's research while affiliated with Honda Research Institute Japan Co., Ltd. and other places

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Publications (10)


Biochemical and pharmacological profile of darexaban, an oral direct factor Xa inhibitor
  • Article

December 2011

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71 Reads

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54 Citations

European Journal of Pharmacology

Yoshiyuki Iwatsuki

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Takayuki Sato

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Yumiko Moritani

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[...]

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Seiji Kaku

Darexaban (YM150) is an oral factor Xa inhibitor developed for the prophylaxis of venous and arterial thromboembolic disease. This study was conducted to investigate the biochemical and pharmacological profiles of darexaban and its active metabolite darexaban glucuronide (YM-222714), which predominantly determines the antithrombotic effect after oral administration of darexaban. In vitro activity was evaluated by enzyme and coagulation assays, and a prothrombin activation assay using reconstituted prothrombinase or whole blood clot. In vivo effects were examined in venous thrombosis, arterio-venous (A-V) shunt thrombosis, and bleeding models in rats. Both darexaban and darexaban glucuronide competitively and selectively inhibited human factor Xa with Ki values of 0.031 and 0.020 μM, respectively. They showed anticoagulant activity in human plasma, with doubling concentrations of darexaban and darexaban glucuronide for prothrombin time of 1.2 and 0.95 μM, respectively. Anticoagulant activity was independent of antithrombin. Darexaban and darexaban glucuronide inhibited the prothrombin activation induced by prothrombinase complex or whole blood clot with similar potency to free factor Xa. In contrast, prothrombinase- and clot-induced prothrombin activation were resistant to inhibition by enoxaparin. In venous and A-V shunt thrombosis models in rats, darexaban strongly suppressed thrombus formation without affecting bleeding time, with ID₅₀ values of 0.97 and 16.7 mg/kg, respectively. Warfarin also suppressed thrombus formation in these models, but caused a marked prolongation of bleeding time at antithrombotic dose. In conclusion, darexaban is a selective and direct factor Xa inhibitor and a promising oral anticoagulant for the prophylaxis and treatment of thromboembolic diseases.

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Discovery of N-[2-Hydroxy-6-(4-methoxybenzamido)phenyl]-4-(4-methyl-1,4-diazepan-1-yl )benzamide (Darexaban, YM150) as a Potent and Orally Available Factor Xa Inhibitor

December 2011

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95 Reads

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34 Citations

Journal of Medicinal Chemistry

Inhibitors of factor Xa (FXa), a crucial serine protease in the coagulation cascade, have attracted a great deal of attention as a target for developing antithrombotic agents. We previously reported findings from our optimization study of a high-throughput screening (HTS) derived lead compound 1a that resulted in the discovery of potent amidine-containing FXa inhibitors represented by compound 2. We also conducted an alternative optimization study of 1a without incorporating a strong basic amidine group, which generally has an adverse effect on the pharmacokinetic profile after oral administration. Replacement of 4-methoxybenzene with a 1,4-benzodiazepine structure and introduction of a hydroxy group at the central benzene led to the discovery of the potent and orally effective factor Xa inhibitor 14i (darexaban, YM150). Subsequent extensive study revealed a unique aspect to the pharmacokinetic profile of this compound, wherein the hydroxy moiety of 14i is rapidly transformed into its glucuronide conjugate 16 (YM-222714) as an active metabolite after oral administration and it plays a major role in expression of potent anticoagulant activity in plasma. The distinctive, potent activity of inhibitor 14i after oral dosing was explained by this unique pharmacokinetic profile and its favorable membrane permeability. Compound 14i is currently undergoing clinical development for prevention and treatment of thromboembolic diseases.


Design, synthesis and biological activity of selective and orally available TF/FVIIa complex inhibitors containing non-amidine P1 ligands

February 2007

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15 Reads

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23 Citations

Bioorganic & Medicinal Chemistry

We found the novel selective and orally available non-amidine TF/FVIIa complex inhibitor 21e, 4-({[(1S)-(aminocarbonyl)-3-methylbutyl]amino}carbonyl)-2'-({[4- (aminomethyl)phenyl]amino}carbonyl)-4'-(methylamino)biphenyl-2- carboxylic acid. The derivatives were synthesized by conversions of the isobutyl moiety and the introduction of alkylamino groups to 4'-position of the central phenyl ring of compounds 2a and 2b reported previously. Some compounds show increased in vitro anti-TF/FVIIa and PT prolongation activities. Among them, compound 21e reached and sustained micromolar plasma concentration levels of up to 2h after oral administration in mice. Moreover, compound 21e did not prolong the bleeding time even at the highest dose level in cynomolgus monkeys, while PT was prolonged 3.7-fold increases at this dose.


Potent and selective TF/FVIIa inhibitors containing a neutral P1 ligand

January 2007

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14 Reads

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18 Citations

Bioorganic & Medicinal Chemistry

Inhibition of tissue factor/factor VIIa complex (TF/FVIIa) is an attractive strategy for antithrombotic therapies. We began with an investigation of a non-amidine TF/FVIIa inhibitor based on a modification of amidine compound 1. Optimization of the substituents on the P1 phenyl portion of the compound 1 led to a neutral or less basic alternative for the 4-amidinophenyl moiety. By further optimization of the substituents on the central phenyl ring, a highly potent and selective TF/FVIIa inhibitor 17d was discovered.


Biochemical and Pharmacological Profiles of YM150, an Oral Direct Factor Xa Inhibitor.

November 2006

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7 Reads

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21 Citations

Blood

YM150 is an oral direct FXa inhibitor used as prophylaxis for venous thromboembolism in patients undergoing elective primary hip replacement surgery (Blood106: 530a (abstract#1865), 2005). No preclinical data has been reported for this compound so far. The biochemical and pharmacological properties of YM150 were evaluated in this study. In addition, the anticoagulation activity of orally administered YM150 was compared with that of YM466, a 1st generation FXa inhibitor, in fed cynomolgus monkeys and in bile duct-cannulated rats. The Ki values for YM150 and YM-222714, its major metabolite, against human FXa were 0.031 and 0.020 μM, respectively (n=4). Those for other serine proteases, such as trypsin, plasmin, and thrombin, were greater than 10 μM. YM150 and YM-222714 doubled the FXa clotting time and PT at 2.0 and 1.8 μM, and 1.2 and 0.95 μM, respectively (n=4). They also strongly inhibited prothrombin activation induced by free Xa, prothrombinase, and whole-blood clots with similar IC50 values (0.025–0.082 μM, n=5). In contrast, enoxaparin was much less effective at inhibiting prothrombin activation induced by prothrombinase or clots than prothrombin activation induced by free Xa (IC50 values: 330, 120, and 3.5 mU/mL, respectively, n=5). In the thromboplastin-induced venous thrombosis model in rats, YM150 (0.3–10 mg/kg i.d.) exerted its antithrombotic effects dose-dependently, with significance at 1 mg/kg (ED50: 0.97 mg/kg, n=6). YM150 prolonged the PT slightly at 10 and 30 mg/kg (1.2 and 1.4 times that of the control group), but the template bleeding time was not affected at 30 mg/kg. Although warfarin also exerted antithrombotic effects dose-dependently and with significance at 0.2 mg/kg (ED50: 0.12 mg/kg, n=6), this dose level markedly prolonged PT and bleeding time (4.4 and 2.2 times that of the control group). In an arterio-venous shunt thrombosis model in rabbits, YM150 (1–10 mg/kg p.o.) exerted antithrombotic effects dose-dependently and with significance at 10 mg/kg (ED50: 4.8 mg/kg, n=6), but did not prolong bleeding time at any dose level. Warfarin also exerted antithrombotic effects dose-dependently and with significance at 0.1 mg/kg/day (ED50: 0.29 mg/kg, n=6). Bleeding time was prolonged significantly at this dose level (control: 3.5 min warfarin: 5.8 min). The plasma concentrations of YM-222714 were 129+/−73.7, 396+/−224, and 3,641+/−902 ng/mL after dosing 1, 3, and 10 mg/kg, respectively, while those of YM150 was substantially lower (less than 125+/−265 ng/mL at 10 mg/kg). In fasted cynomolgus monkeys, oral administration of either YM150 (3–30 mg/kg) or YM466 (1–10 mg/kg) dose-dependently prolonged PT. The anticoagulation activity of YM466 was 3 times that of YM150, but this activity decreased significantly in the presence of food, while that of YM150 did not. The peak plasma anti-FXa activity after oral administration of 3 mg/kg YM150 to bile duct-cannulated rats and sham-operated rats were 67.7% and 68.5%, respectively. In contrast, those of 3 mg/kg YM466 were 57.4% and 26.2%, respectively. These data suggest that food or bile interferes with YM150 less than it does with YM466. In conclusion, YM150 is a promising oral FXa inhibitor that carries a bleeding risk that is less than that of warfarin. It also seems be well-absorbed without interference by food or bile. The in vivo antithrombotic activity of YM150 after oral administration was also determined to be produced by its active metabolite, YM-222714.


Pharmacological properties of YM-254890, a specific Gáq/11 inhibitor, on thrombosis and neointima formation in mice

August 2005

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133 Reads

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42 Citations

Thrombosis and Haemostasis

The pharmacological properties of YM-254890, a specific G(alpha)q/11 inhibitor, on acute thrombosis and chronic neointima formation after vascular injury have been investigated. FeCl3 was used to induce vascular injury in the carotid artery of mice. For the thrombosis studies, the test drug was either intravenously or orally administered before vascular injury. For the neointima studies, the test drug was orally administered 1 h before and twice daily for 1 week after vascular injury. Histological analysis was then performed 3 weeks later. YM-254890 significantly inhibited ex vivo platelet aggregation 5 min after intravenous bolus injection at 0.03 mg/kg or more, and 1 h after oral administration at 1 mg/kg. YM-254890 significantly inhibited thrombus formation after intravenous bolus injection at 0.03 mg/kg as well as after oral administration at 1 mg/kg, but tail transection bleeding time was significantly prolonged at 0.1 mg/kg for intravenous injection and 3 mg/kg for oral administration. Furthermore, oral administration of YM-254890 dose-dependently inhibited neointima formation 3 weeks after vascular injury with significant effects at 1 mg/kg twice daily for 1 week. Clopidogrel also significantly inhibited neointima formation at its antithrombotic dose, but its inhibitory potency was less than that of YM-254890. However, YM-254890 significantly reduced systemic blood pressure at doses 3 times higher than those that produced significant inhibitory effects on thrombosis and neointima formation. Though the systemic use of YM-254890 may be limited, owing to its narrow therapeutic window, this unique compound is a useful research tool for investigating the physiological roles of G(alpha)q/11 .


Synthesis and biological activity of novel 1,2-disubstituted benzene derivatives as factor Xa inhibitors

March 2005

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16 Reads

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27 Citations

Bioorganic & Medicinal Chemistry

Factor Xa (fXa) is a serine protease that plays a pivotal role in the coagulation cascade. High-throughput screening of the Yamanouchi compound library yielded lead compound 1 with the ability to inhibit fXa at micromolar concentrations. To improve its fXa inhibitory activity and its oral anticoagulant activity, the linker between benzamidine and the central benzene ring was modified and a carboxyl group was introduced at the central benzene ring. The resulting compounds 40b (YM-203552), 41a (YM-202054), and 41c (YM-203558) exhibited potent fXa inhibitory activity and oral anticoagulant activity. In particular, YM-203558 exhibited the most potent oral anticoagulant activity, prolonging PT more than 3-fold at 0.5 and 2.0 h. Additionally, these compounds showed a high degree of selectivity for other serine proteases.


Orally active factor Xa inhibitor: Synthesis and biological activity of masked amidines as prodrugs of novel 1,4-diazepane derivatives

November 2004

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19 Reads

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17 Citations

Bioorganic & Medicinal Chemistry

To improve their anticoagulant activity after oral administration, prodrug strategy was applied to fXa inhibitors based on a 1,4-diazepane template by conversion of the amidine group into amidoxime and alkoxycarbonyloxyamidine groups. This study revealed that amidoxime prodrugs bearing an ester moiety are efficient for the expression of oral anticoagulant activity. Factor Xa (fXa) is a serine protease, which plays a pivotal role in the coagulation cascade. To improve the oral anticoagulant activity of fXa inhibitors containing a 1,4-diazepane moiety as the P4 part, a prodrug strategy was examined. Among the compounds evaluated in this study, amidoxime prodrugs bearing an ester moiety, such as compounds 21 and 30, showed effective oral anticoagulant activity in mice.


Pharmacological properties of YM-57029, a novel platelet glycoprotein IIb/IIIa antagonist

April 2002

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68 Reads

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7 Citations

European Journal of Pharmacology

The pharmacological properties of YM-57029 [4-[4-(4-carbamimidoylphenyl)-3-oxopiperazin-1-yl]piperidino]acetic acid monohydrochloride trihydrate), a novel glycoprotein IIb/IIIa antagonist were examined in this study. YM-57029 inhibited fibrinogen binding to purified glycoprotein IIb/IIIa, 1000-fold more potently than the tetrapeptide arginine-glycine-aspartic acid-serine (RGDS). YM-57029 concentration-dependently inhibited ADP-, collagen- and high shear stress-induced platelet aggregation, strongly inhibited ATP release from platelets activated by ADP, and enhanced deaggregation of ADP-induced platelet aggregates. In a pro-aggregatory activity study, RGDS or SC-54701A ((S)-3-[3-[(4-amidinophenyl)carbamoyl]propionamido]-4-pentynoic acid monohydrochloride) caused prominent small aggregate formation. At a higher concentration, RGDS induced medium and large size aggregates, and SC-54701A induced medium aggregates. In contrast, YM-57029 produced only a few small and no larger size aggregates. Ex vivo ADP-induced platelet aggregation and platelet retention to collagen-coated plastic beads were dose-dependently inhibited by YM-57029 after intravenous bolus injection in guinea pigs. YM-57029 produced dose-dependent antithrombotic effects in carotid artery thrombosis and arterio-venous shunt thrombosis models in guinea pigs at 10 and 30 microg/kg, respectively. At these doses, YM-57029 prolonged template bleeding time. These results suggest that YM-57029 is a potent glycoprotein IIb/IIIa antagonist which has less pro-aggregatory effect. It may be a promising antiplatelet agent for thromboembolic diseases, and a good prototype for developing an orally active compound.


Pharmacodynamics and pharmacokinetics of YM128, GPIIb/IIIa antagonist prodrug

March 2002

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15 Reads

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5 Citations

Drug Development Research

We examined the biochemical properties of YM-57029 ({4-[4-(4-Carbamimidoylphenyl)-3-oxopiperazin-1-yl]piperidino}acetic acid monohydrochloride trihydrate) and the pharmacodynamics and pharmacokinetics of its prodrug, YM128 (Ethyl (Z)-(4-{4-[4-(N2-hydroxycarbamimidoyl)phenyl]-3-oxopiperazin-1-yl}piperidino)acetate), an orally-active glycoprotein IIb/IIIa (GPIIb/IIIa) antagonist. YM-57029 strongly inhibited aggregation of human platelets induced by various agonists, with IC50 values ranging from 3.6 to 51 nM. YM-57029 specifically inhibited fibrinogen binding to purified GPIIb/IIIa about 1,000-fold more potently than Arg-Gly-Asp-Ser (RGDS). Moreover, YM-57029 effectively inhibited an Arg-Gly-Asp (RGD) peptide binding to platelets, suggesting that YM-57029 competed with the RGD sequence of ligand. YM-57029 or YM128 dose-dependently inhibited ex vivo platelet aggregation after iv bolus injection or oral administration to beagle dogs and cynomolgus monkeys. However, YM128 exerted more potent and prolonged inhibitory effects on platelet aggregation than YM-57029 after oral administration to cynomolgus monkeys. Furthermore, YM-57029 prolonged template bleeding time at a dose that inhibited ex vivo platelet aggregation during cumulative iv infusion to cynomolgus monkeys. Metabolic and pharmacokinetic studies showed that YM128 effectively converted into YM-57029 in liver microsomes from humans as well as dogs and monkeys, and that bioavailabilities of YM128 in dogs and monkeys were 32.3 and 22.2%, respectively. These results suggest that YM128, a prodrug of YM-57029, may be a valuable GPIIb/IIIa antagonist with good bioavailability in humans. Drug Dev. Res. 55:149–161, 2002. © 2002 Wiley-Liss, Inc.

Citations (10)


... Administration of YM150 results in dose-dependent increases in PT and APTT and a dose-dependent decrease in Xa activity [69]. YM150 and its metabolite are highly specific for Xa; the Ki values for YM150 and YM-222714 for Xa are 0.031 and 0.020μM, respectively; by contrast their K i values for thrombin exceed 10μM [70]. ...

Reference:

Emerging Anticoagulants
Biochemical and Pharmacological Profiles of YM150, an Oral Direct Factor Xa Inhibitor.
  • Citing Article
  • November 2006

Blood

... The Ki values of YM466 for human factor Xa and thrombin were 1.3 nM and over 100 µM, respectively. Furthermore, we also discovered a potent GPIIb/IIIa antagonist, YM-57029 (20), and its prodrug YM128 (21). YM-57029 inhibited fibrinogen binding to GPIIb/IIIa about 1,000-fold more potently than RGDS, but had no effect on vitronectin binding to α v β 3 and α v β 5 , or fibronectin binding to α 5 β 1 (21). ...

Pharmacodynamics and pharmacokinetics of YM128, GPIIb/IIIa antagonist prodrug
  • Citing Article
  • March 2002

Drug Development Research

... Because the 1,2-phenylenediamine framework has many advantages such as less chirality, high affinity for FXa (Franciskovich et al., 2005;Koshio et al., 2005), and ease to get, meanwhile, FXa inhibitors with this structure also possess predictable pharmacokinetics (Kadokura et al., 2013a), small interactions with food (Kadokura et al., 2013b) and no inter drug interactions (Kadokura et al., 2014). Yang et al. (2015b) reported on the structural characteristics of Darexaban (Iwatsuki et al., 2011) with its glucuronic acid conjugate YM-222714 (Ishihara et al., 2014), Designed a series of FXa inhibitors with 3,4-diaminobenzidine backbone. They observed that when the volume of the aromatic ring of the P1 portion of the ligand was increased, the inhibitory activity of the compound would also increase and the increase in activity from the phenyl cycle would be due to other aromatic cycles. ...

Biochemical and pharmacological profile of darexaban, an oral direct factor Xa inhibitor
  • Citing Article
  • December 2011

European Journal of Pharmacology

... FXa is a vitamin K-dependent serine protease (Patel et al., 2016) composed of two amino acid chains (Hirayama et al., 2011) with different molecular weights. The active site of FXa is localized within the amino acid chain with greater molecular weight. ...

Discovery of N-[2-Hydroxy-6-(4-methoxybenzamido)phenyl]-4-(4-methyl-1,4-diazepan-1-yl )benzamide (Darexaban, YM150) as a Potent and Orally Available Factor Xa Inhibitor
  • Citing Article
  • December 2011

Journal of Medicinal Chemistry

... 103 Antiplatelet agents including D-003, YM-57029, YS-49, LCB 2853, and YS-51-l-naphthylmethyl analogs of higenamine have been shown to inhibit platelet aggregation in venous thrombosis in mice, rats, and guinea pig models. [104][105][106][107] Treatment of mice with ticlopidine and Ginkgo biloba extract (EGb 761) found that there was a marked decrease in thrombus weight 108 ...

Pharmacological properties of YM-57029, a novel platelet glycoprotein IIb/IIIa antagonist
  • Citing Article
  • April 2002

European Journal of Pharmacology

... Entry A is a collection of YM466 derivatives [19]. Entry B is a set of analogous naphtoanilide derivatives [20], and entry C contains relative 1,4-diazepan derivatives [21]. In the YM466 series, the SARs of fXa inhibitory activities around the central groups were as follows: 4-carboxyphenyl > carboxymethyl > methyl (entry A). ...

Orally active factor Xa inhibitor: Synthesis and biological activity of masked amidines as prodrugs of novel 1,4-diazepane derivatives
  • Citing Article
  • November 2004

Bioorganic & Medicinal Chemistry

... The predicted order of inhibitory activities of the two amidine derivatives recommended by our workflow was identical to the measured order. We previously reported that a darexaban analogue with a 3-amidinophenyl moiety as an S1 binder exhibited more potent fXa inhibitory activity than darexaban (measured pIC50 = 8.24), although an analogous 4-amidino isomer was a poor fXa inhibitor with a measured pIC50 value = 4.62 [40]. However, these data are not registered in ChEMBL version 20, and therefore it is not possible to confirm the applicability of the fragments to the darexaban-chemotype nor to search their fXa inhibitory activities. ...

Synthesis and biological activity of novel 1,2-disubstituted benzene derivatives as factor Xa inhibitors
  • Citing Article
  • March 2005

Bioorganic & Medicinal Chemistry

... GPCR inhibitors have also been describe to inhibit YAP/TAZ-TEAD indirectly (Cunningham and Hansen, 2022). For instance, YM-254890, a specific G(α)q/11 inhibitor that indirectly inhibits YAP/TAZ (Zindel et al., 2021), inhibited IH in a mouse model of vascular injury (Kawasaki et al., 2005). However, YM-254890 also reduced systemic blood pressure and no further investigations were made in the context of IH (Kawasaki et al., 2005). ...

Pharmacological properties of YM-254890, a specific Gáq/11 inhibitor, on thrombosis and neointima formation in mice
  • Citing Article
  • August 2005

Thrombosis and Haemostasis

... One of the successful neutral P1 groups is the meta-benzamide. 15,18 In addition to forming a hydrogen bond with Asp189, the primary amide makes two interactions with the backbone carbonyl of Gly219: A benzamide N−H hydrogen bonds with the oxygen of the Gly219 carbonyl, while the carbonyl of the amide forms a dipolar interaction 19 with the carbon in the Gly219 carbonyl. In our phenylglycine series, 16 we synthesized a library of substituted phenyl P1 groups and discovered that the only active compound was meta-benzamide 1, which provides a compound with modest potency, but good permeability and selectivity. ...

Potent and selective TF/FVIIa inhibitors containing a neutral P1 ligand
  • Citing Article
  • January 2007

Bioorganic & Medicinal Chemistry

... Miura et al. report the discovery of more neutral fVIIa inhibitors starting from a benzamidine-containing biphenyl lead compound (inhibitor 5-1) [48]. Initially, the 4-position amidine moiety was replaced with a 3-aminocarbonyl group and subsequent structures contained a benzylamine group (inhibitor 5-2) [48,49]. Several electron withdrawing and donating substituents were investigated on the core biphenyl scaffold to develop a potent, yet selective inhibitor with oral bioavailability. ...

Design, synthesis and biological activity of selective and orally available TF/FVIIa complex inhibitors containing non-amidine P1 ligands
  • Citing Article
  • February 2007

Bioorganic & Medicinal Chemistry