S. T. Koike's research while affiliated with United Diagnostics and other places

What is this page?


This page lists the scientific contributions of an author, who either does not have a ResearchGate profile, or has not yet added these contributions to their profile.

It was automatically created by ResearchGate to create a record of this author's body of work. We create such pages to advance our goal of creating and maintaining the most comprehensive scientific repository possible. In doing so, we process publicly available (personal) data relating to the author as a member of the scientific community.

If you're a ResearchGate member, you can follow this page to keep up with this author's work.

If you are this author, and you don't want us to display this page anymore, please let us know.

Publications (170)


First Report of Globisporangium uncinulatum (syn. Pythium uncinulatum ) Causing Pythium Wilt of Artichoke in California
  • Article

March 2024

Plant Disease

S. T. Koike

·

H. Stanghellini

·

C. Tsuchida

·

J. Guerrero
Share


Integrating broccoli rotation, mustard meal, and anaerobic soil disinfestation to manage verticillium wilt in strawberry

August 2021

·

83 Reads

·

11 Citations

Crop Protection

·

·

Elizabeth Milazzo

·

[...]

·

Verticillium wilt, a disease caused by the fungus Verticillium dahliae, affects a vast range of crops, including strawberries. A field trial was established to evaluate the effect of broccoli in rotation prior to strawberries, anaerobic soil disinfestation (ASD), and mustard cake (MC) alone and in combination at suppressing V. dahliae. Broccoli, cauliflower and fallow plots were established in year 1, followed by strawberry, winter cover crop, and lettuce across all plots over the next two years. ASD and ASD + MC improved strawberry yields compared to the untreated control (UTC). At the end of the harvest season, V. dahliae infection rates in strawberry crowns were lower in the ASD and ASD + MC treatments compared to the UTC. After harvest of the lettuce crop, the number of V. dahliae microsclerotia in soil treated previously with ASD was lower than in the UTC. Broccoli residue incorporation had no effect and MC alone a limited effect on strawberry yields, V. dahliae in strawberry crowns, and soil microsclerotia levels at lettuce harvest. All rotations treated with ASD showed higher total net returns despite the higher cost of treatments. The ability of ASD to control V. dahliae and its persistent suppressive effect on soil microsclerotia levels have important economic implications for growers.







Development of Molecular Methods to Detect Macrophomina phaseolina from Strawberry Plants and Soil

June 2018

·

48 Reads

·

33 Citations

Phytopathology

Macrophomina phaseolina is a broad-host range fungus that shows some degree of host preference on strawberry, and causes symptoms including crown rot and root rot. Recently, this pathogen has impacted strawberry production as fumigation practices have changed, leaving many growers in California and around the world in need of accurate, rapid diagnostic tools for M. phaseolina in soil and infected plants. This study uses next-generation sequencing and comparative genomics to identify a locus that is unique to isolates within a main genotype shared by a majority of isolates that infect strawberry. This locus was used to develop a quantitative single-tube nested TaqMan qPCR assay which is able to quantify as little as 2-3 microsclerotia/g of soil with 100% genotype specificity. An isothermal assay using recombinase polymerase amplification (RPA) was developed from the same locus and has been validated on over 200 infected strawberry plants with a diagnostic sensitivity of 93% and a diagnostic specificity of 99%, respectively. Together, this work demonstrates the value of using new approaches to identify loci for detection and provides valuable diagnostic tools that can be used to monitor soil and strawberry plant samples for M. phaseolina.



Citations (73)


... The cultivation of NUPs that are tree species inevitably falls into the principles of orchard management. According to these principles, organic management mainly considers diversification in terms of lower inputs or inputs with a lesser environmental impact for fertilization, crop protection and/or water management, as opposed to conventional management, where traditionally no such limitations apply [39,40]. A large body of evidence from the literature supports the environmental sustainability of organic tree crop management compared to conventional systems as part of an integrated or diversified management system [41][42][43][44]. ...

Reference:

Enhancing the Propagation and Cultivation Framework of Greek Rosa canina L. Germplasm via Sustainable Management Techniques
Soil Fertility Management for Organic Crops
  • Citing Book
  • April 2007

... In particular, Bremia lactucae, responsible for downy mildew, and Botrytis cinerea, responsible for grey mold, are two of the most destructive aerial pathogens of lettuce plants worldwide [2]. Other important phytopathogens are those that are soilborne, causing general symptoms such as: basal rot disease, which is associated with several species of Pythium and Phytophthora cryptogea; basal leaf decay, which is associated with Rhizoctonia solani, Sclerotinia sclerotiorum, and S. minor [3][4][5][6][7]; southern blight disease, caused by Athelia rolfsii; and vascular diseases (wilt), associated mainly with Fusarium oxysporum f.sp. lactucae [8]. ...

First Report of Phytophthora Root Rot Caused by Phytophthora cryptogea on Field-Grown Lettuce in California
  • Citing Article
  • September 2021

Plant Disease

... Anaerobic Soil Disinfestation (ASD) is an alternative to fumigation used in a variety of crops and to manage a wide range of pests, weeds and diseases (Blok et al. 2000;Shennan et al. 2014b;Lopes et al. 2022;Mazzola, Muramoto, and Shennan 2018;Shennan et al. 2016;Zavatta et al. 2021), gaining global popularity (Khadka et al. 2020;Shennan et al. 2014b;Priyashantha and Attanayake 2021;Rosskopf et al. 2020;Shennan et al. 2018;Vecchia et al. 2020). The method creates an anaerobic soil environment before planting, by adding a carbon source to the soil such as wheat bran, molasses, rice straw, or rice bran to promote microbial growth and respiration, followed by plastic tarping and irrigation (Momma 2008;Shennan et al. 2018). ...

Integrating broccoli rotation, mustard meal, and anaerobic soil disinfestation to manage verticillium wilt in strawberry
  • Citing Article
  • August 2021

Crop Protection

... Botryosphaeriaceae is a fungal family comprising almost 500 species of plant pathogens [19], including M. phaseolina, the causal agents of charcoal rot in common bean [20] and other legumes, as well as root rot [8,9]. Nevertheless, this pathogen has been isolated from different plant species, such as: strawberry, peanut and basil [14,21,22]. The wide range of infected hosts and the ubiquitous geographic distribution of M. phaseolina make it one of the most studied emerging pathogens all over the globe. ...

First Report of Macrophomina Crown Rot Caused by Macrophomina phaseolina on Basil in the United States
  • Citing Article
  • February 2021

Plant Disease

... As a result of these limitations, plants treated with SoS chemicals, including more recent materials such as isoxazolines (e.g., oxathiapiprolin = Segovis ® , Zorvec ® ), can still become infected by Phytophthora (Benson 1987, Hamm et al. 1984, Ji et al. 2014, Matheron and Porchas 2015, Rupp et al. 2016, Tjosvold et al. 2008). If levels of SoS chemicals are high enough in the host tissue, subsequent pathogen growth and reproduction will be suppressed. ...

Evaluation of Fungicides for the Control of Phytophthora ramorum Infecting Rhododendron, Camellia, Pieris , and Viburnum
  • Citing Article
  • January 2008

Plant Health Progress

... Síntomas como amarillamiento y marchitamiento de hojas maduras, marchitamiento de hojas jóvenes y necrosis marrón en la corona se reportaron en Brassica rapa L. subsp. rapa, afectada por R. solani ag 2-1 [31]. En el tomate (Solanum lycopersicum L.), R. solani causa lesiones irregulares y húmedas, de color marrón y de aspecto hundido, en los tallos de las plantas jóvenes y, en plantas maduras, marchitamiento y daño del tallo con cancro marrón en la corona de este [4]. ...

First Report of Crown Rot Caused by Rhizoctonia solani AG 2-1 on Broccoli Rabe in Arizona
  • Citing Article
  • August 2020

Plant Disease

... For example, Fusarium oxysporum f. sp. fragariae was suppressed by ASD only when the cumulative hours at temperatures >30°C at 20-cm soil depth exceeded 467 h, which was accomplished under mean air temperature of 15°C in coastal California (Muramoto et al. 2020). A meta-analysis of ASD efficacy against Fusarium oxysporum suggested that ASD was effective in suppressing this pathogen when the soil temperature was >25°C (Shrestha et al. 2021). ...

Use of a summer cover crop as a partial carbon source for anaerobic soil disinfestation in coastal California
  • Citing Article
  • February 2020

Acta Horticulturae

... Sclerotinia sclerotiorum has been detected in air samples from an outdoor cannabis field (Green et al. 2018). Sclerotinia stem canker was previously reported on hemp in Alberta (Bains et al. 2000) and New Brunswick (Gauthier et al. 2020) and Sclerotinia crown rot has been reported from California on hemp grown after a lettuce crop (Koike et al. 2019) but this is the first report of Sclerotinia bud rot on cannabis. ...

First Report of Sclerotinia Crown Rot Caused by Sclerotinia minor on Hemp
  • Citing Article
  • May 2019

Plant Disease

... Thus, a selective medium with high selectivity for the target pathogenic bacterium is required. KBC medium (Mohan and Schaad 1987) is widely used for the isolation of bacteria in the P. syringae group (Asaad et al. 2017;Bull and Koike 2017;Randhawa et al. 2017;Shepherd and Block 2017). However, KBC has been developed to isolate P. syringae pv. ...

CHAPTER 24: Detection of Pseudomonas Pathogens from Crucifer Seeds
  • Citing Chapter
  • March 2017

... [61] Mycosphaerella spp [62] and Alternaria spp. [63][64][65], which can be associated with seeds and grains cached in burrows of rodents living in arid environments [66][67][68]. Removing abundant species made little difference in the relationship between Coccidioides and the fungal community when compared to the full dataset. ...

Association of the Carrot Pathogen Alternaria dauci With New Diseases, Alternaria Leaf Speck, of Lettuce and Celery in California
  • Citing Article
  • January 2017

Plant Health Progress