Martyn K. Robinson's research while affiliated with WWF United Kingdom and other places

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Publications (48)


Figure 2. 
Figure 3. Structural Homologues of Dkk4 CRD1. (A)-(D) show equivalent views of ribbon representations of the backbone structures of Dkk4 CRD1, Dkk1 CRD2, IGFBP4N and the ICK domain of Jingzhaotoxin XI respectively. The locations of the disulphides are shown in yellow. 
Figure 4. Dkk4 Binds with High Affinity to LRP6 E1E2 (A) Schematic representations of the human His-tagged Dkk4FL and Dkk4N, and LRP6 E1E2-Fc expression constructs. (B) Western blot analysis of pull-down assays, illustrating the binding of His-tagged Dkk proteins to LRP6 E1E2-Fc captured on protein A beads. (C) Representative biolayer interferometry sensorgrams for His-tagged Dkk4FL binding to immobilised LRP6 E1E2-Fc. Association and dissociation phases of sensorgrams are shown for a range of indicated concentrations of His-tagged Dkk4FL, together with the steady state binding curve derived from the maximum response (Rmax) observed. The KD reported was obtained by fitting to a one-site binding model using Prism 6.0. (D) A summary of biolayer interferometry KD measurements from two individual experiments and representative of a minimum of three or more independent measurements. Errors shown are the standard error calculated for individual fitted curves using Prism 6.0. (ND-No data obtained). 
Figure 5. Mapping of the LRP6 E1E2 Interaction Site on Dkk4 (A) Overlay of selected regions from the 15 N/ 1 H TROSY spectra of uniformly 15 N/ 13 C/ 2 H-labelled Dkk4FL acquired in the absence (blue) and presence (red) of a 10 % molar excess of unlabelled LRP6 E1E2. A selection of the well resolved signals from Dkk4 CRD2 that are lost on binding to LRP6 E1E2 are labelled by residue type and number. (B) Minimum chemical shift perturbation observed for backbone amide groups of His-tagged Dkk4FL induced by the addition of LRP6 E1E2. The positions of CRD1 and CRD2 are shown above the histogram as blue and yellow boxes, respectively. 
Figure 6 

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Structural and functional analysis of Dickkopf 4 (Dkk4): New insights into Dkk evolution and regulation of Wnt signaling by Dkk and Kremen proteins
  • Article
  • Full-text available

June 2018

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311 Reads

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21 Citations

Journal of Biological Chemistry

Saleha Patel

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Alice M Barkell

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Deepti Gupta

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[...]

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Mark David Carr

Dickkopf (Dkk) family proteins are important regulators of Wnt signalling pathways, which play key roles in many essential biological processes. Here we report the first detailed structural and dynamics study of a full-length mature Dkk protein (Dkk4, residues 19-224), including determination of the first atomic resolution structure for the N-terminal cysteine-rich domain (CRD1) conserved among Dkk proteins. We discovered that CRD1 has significant structural homology to the Dkk C-terminal cysteine-rich domain (CRD2), pointing to multiple gene duplication events during Dkk family evolution. We also show that Dkk4 consists of two independent folded domains (CRD1 and CRD2) joined by a highly flexible, non-structured linker. Similarly, the N-terminal region preceding CRD1 and containing a highly conserved NXIR/K sequence motif was shown to be dynamic and highly flexible.We demonstrate that Dkk4 CRD2 mediates high-affinity binding to both the E1E2 region of LDL receptor-related protein 6 (LRP6 E1E2) and the Kremen1 (Krm1) extracellular domain. In contrast, the N-terminal region alone bound with only moderate affinity to LRP6 E1E2, consistent with binding via the conserved NXIR/K motif, but did not interact with Krm proteins. We also confirmed that Dkk and Krm family proteins function synergistically to inhibit Wnt signalling. Insights provided by our integrated structural, dynamics, interaction and functional studies have allowed us to refine the model of synergistic regulation of Wnt signalling by Dkk proteins. Our results indicate the potential for the formation of a diverse range of ternary complexes comprising Dkk, Krm and LRP5/6 proteins, allowing fine-tuning of Wnt-dependent signalling.

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Fig. 1. Treatment with Scl-AbI increases whole body BMD in mice. Female Balb/c mice (8-10 weeks old) were treated with 10 mg/kg Scl-AbI s.c. weekly and whole body BMD measured by DXA. Scl-AbI solid line; vehicle dotted line. The % BMD increase over the vehicle group at 2, 4, 6 and 8 weeks was 13 ± 9; 11 ± 6; 18 ± 2 and 17 ± 5 whilst the total whole body BMD increase over the duration of the study was 25% ± 5 for the SclAbI treated group compared with 8% ± 4 for the vehicle control group. ****P b 0.0001 compared with the age-matched vehicle group (two-way ANOVA); N = 10/group.
Fig. 5. Transcripts encoding secreted antagonists of Wnt signalling are up-regulated following one, or multiple, doses of Scl-AbI. Female Balb/c mice (8-10 weeks old) were treated with one or six doses of Scl-AbI (10 mg/kg s.c.), or vehicle control. The abundance of transcripts encoding various secreted antagonists of Wnt signalling in the femur was compared by qRT-PCR. Rpl38 is an unrelated transcript which is reported to show stable expression. A. The effect of a single dose (striped bars) or six doses (filled bars) of Scl-AbI on the abundance of transcripts encoding secreted antagonists that bind Wnt co-receptors LRP5/6. B. The effect of a single dose (striped bars) or six doses (filled bars) of Scl-AbI on the abundance transcripts encoding secreted antagonists that bind Wnt ligands. ****P b 0.0001; ***P b 0.001, **P b 0.01, *P b 0.05; compared with age matched vehicle control ++P b 0.001, +P b 0.05; comparison of multiple doses with a single dose (two-way ANOVA); N = 4/group.
Fig. 6. A second phase of dosing with Scl-AbI following a treatment-free period is an effective strategy to elicit an additional increase in BMD. Longitudinal areal BMD was measured in female Balb/c mice (8-10 weeks old) dosed with vehicle (dotted line) or 10 mg/kg s.c. Scl-AbI (solid line). The arrows show the two phases of weekly dosing with Scl-AbI. ****P b 0.0001; *P b 0.05; comparison with age matched vehicle control (two-way ANOVA); N = 5-10/group.
of probes used for quantitative real-time PCR experiments.
Dampening of the bone formation response following repeat dosing with sclerostin antibody in mice is associated with up-regulation of Wnt antagonists

November 2017

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88 Reads

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43 Citations

Bone

Administration of antibodies to sclerostin (Scl-Ab) has been shown to increase bone mass, bone mineral density (BMD) and bone strength by increasing bone formation and decreasing bone resorption in both animal studies and human clinical trials. In these studies, the magnitude and rate of increase in bone formation markers is attenuated upon repeat dosing with Scl-Ab despite a continuous and progressive increase in BMD. Here, we investigated whether the attenuation in the bone formation response following repeated administration of Scl-Ab was associated with increased expression of secreted antagonists of Wnt signalling and determined how the circulating marker of bone formation, P1NP, responded to single, or multiple doses, of Scl-Ab four days post-dosing. Female Balb/c mice were treated with Scl-Ab and we demonstrated that the large increase in serum P1NP observed following the first dose was reduced following administration of multiple doses of Scl-Ab. This dampening of the P1NP response was not due to a change in the kinetics of the bone formation marker response, or differences in exposure to the drug. The abundance of transcripts encoding several secreted Wnt antagonists was determined in femurs collected from mice following one or six doses of Scl-Ab, or vehicle treatment. Compared with vehicle controls, expression of SOST, SOST-DC1, DKK1, DKK2, SFRP1, SFRP2, FRZB, SFRP4 and WIF1 transcripts was significantly increased (approximately 1.5–4.2 fold) following a single dose of Scl-Ab. With the exception of SFRP1, these changes were maintained or further increased following six doses of Scl-Ab and the abundance of SFRP5 was also increased. Up-regulation of these Wnt antagonists may exert a negative feedback to increased Wnt signalling induced by repeated administration of Scl-Ab and could contribute to self-regulation of the bone formation response over time. After an antibody-free period of four weeks or more, the P1NP response was comparable to the naïve response, and a second phase of treatment with Scl-Ab following an antibody-free period elicited additional gains in BMD. Together, these data demonstrate that the rapid dampening of the bone formation response in the immediate post-dose period which occurs after repeat dosing of Scl-Ab is associated with increased expression of Wnt antagonists, and a treatment-free period can restore the full bone formation response to Scl-Ab.


Up-regulation of Wnt antagonists contributes to the attenuated response of bone formation to repeat doses of sclerostin antibody in a mouse model

April 2016

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18 Reads

Bone Abstracts

Loss of the gene encoding the secreted Wnt antagonist sclerostin results in increased bone mass in humans and mice. Administration of antibodies to sclerostin (Scl-Ab) has been shown to increase bone mineral density (BMD) by increasing bone formation and decreasing bone resorption, in both animal studies and human clinical trials. In these studies, the magnitude and rate of increase in bone formation markers, and the rate of increase of BMD, diminishes upon repeat dosing with Scl-Ab despite a continuous and progressive increase in BMD. In this study, we investigated whether increased expression of secreted antagonists of Wnt signalling could be a contributory factor to the apparent attenuated response in markers of bone formation following repeat dosing of Scl-Ab. Treatment of female Balb/c mice (8–10 weeks old) with Scl-Ab for five weeks (10 mg/kg weekly, s.c.) increased DXA whole body BMD by 9.4%±2.0% compared with vehicle control. Serum P1NP, a bone formation marker, was measured 4 days after one, three or five doses of Scl-Ab. After the first dose of Scl-Ab, serum P1NP significantly increased versus vehicle control (165%±9%) whilst the increase was less pronounced after the third or fifth dose of Scl-Ab (56%±11% or 21%±6%, respectively). In order to investigate the mechanism of this attenuated response, mRNA expression of several secreted Wnt antagonists was determined in femurs collected from mice following five weeks of Scl-Ab or vehicle treatment. Expression of SOST, SOST-DC1, DKK1, DKK2, SFRP2, FRZB, SFRP4, SFRP5 and WIF1 transcripts was significantly increased (approximately 2–3.5 fold) upon Scl-Ab treatment compared with vehicle controls. Continuous administration of Scl-Ab is associated with up-regulation of several Wnt antagonists. This could represent a negative feedback to increased Wnt signalling induced by Scl-Ab and may help explain the attenuation in the bone formation response and in bone density increase over time.


Movies S1 & S2

February 2016

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17 Reads

3D reconstruction of multi-photon luminescence imaging of MWNT-Fab′-DTPA in brain slices. Mice were i.v. injected with MWNT-Fab′-DTPA (200 μg) and brains were isolated at 1 h after injection. Mice were perfused with DiI and 4% PFA at sacrifice. Brains were sectioned into 1 mm thick slices (z-step: 1 μm, number of optical sections: 150; λexcitation = 950 nm). Blood vessels appear in red (Dil stained) while f-MWNT appears in white.








Citations (35)


... Dickkopf-related protein 4 (DKK4) is a member of the Dickkopf family and is a soluble extracellular LRP5/6 antagonist that prevents the formation of the FRIZZLED (FZD)-LRP6 complex [1]. The FZD-LRP6 complex with Wnt ligands forms a ternary complex to promote the stabilization of β-catenin to activate the Wnt pathway [2]. ...

Reference:

Colorectal cancer cells secreting DKK4 transform fibroblasts to promote tumour metastasis
Structural and functional analysis of Dickkopf 4 (Dkk4): New insights into Dkk evolution and regulation of Wnt signaling by Dkk and Kremen proteins

Journal of Biological Chemistry

... which is known to act as a sponge for this microRNA. SFRP1 serves as an antagonist of the Wnt/b-catenin signaling pathway, which is responsible for inhibiting the downstream transduction of Wnt and its associated transduction proteins (117). Conversely, the overexpression of miR-181c-5p can activate the Wnt pathway by negatively regulating the expression of SFRP1 and promoting bcatenin signal transduction. ...

Dampening of the bone formation response following repeat dosing with sclerostin antibody in mice is associated with up-regulation of Wnt antagonists

Bone

... Typically, two strategies are applied for carrying out this process, namely the indirect surface labeling and the direct surface labeling. In the first strategy, certain chelators such as diethylenetriaminepentaacetic acid (DTPA), 1,4,7,10-tetraazacyclododecane-1,4,7,10-tetraacetic acid (DOTA), 1,4,7-triazacyclononane-1,4,7-triacetic acid (NOTA), and deferoxamine (DFO) are anchored on the top layer of NMs for linking with metallic radionuclides (e.g., 99 mTc, 177 Lu, 64 Cu, 68 Ga), while prosthetic groups are used rather than covalently binding the NMs with nonmetallic radionuclides (e.g., 11/14 C, 18 F, 76 Br, 123 I, 124 I, 125 I, [112][113][114][115][116][117][118][119][120][121][122][123][124][125][126][127]. In the second strategy, radioisotopes are directly attached onto NMs by forming chemical bonds with nanomaterials. ...

Kinetics of functionalised carbon nanotube distribution in mouse brain after systemic injection: Spatial to ultra-structural analyses

Journal of Controlled Release

... There is evidence indicating that at least for certain CD40 antibodies FcγR binding may contribute to these adverse events [8,21]. Interestingly, the association between FcγR binding and adverse events is not restricted to CD40 antibodies but has also been observed in antibodies targeting other TNFR family members or CD40L [9,[22][23][24]. ...

CDP7657, an anti-CD40L antibody lacking an Fc domain, inhibits CD40L-dependent immune responses without thrombotic complications: An in vivo study

Arthritis Research & Therapy

... Mucosal addressin cell adhesion molecule-1 (MAd-CAM-1) is an endothelial CAM of the immunoglobulin superfamily (along with ICAM-1 and VCAM-1) that has been implicated in the selective recruitment of lymphocytes to sites of inflammation in the gut (3,6,27,38). MAdCAM-1 is expressed on the specialized microvascular endothelial cells lining venules (high endothelial venules) of Peyer's patches, and it is found on endothelial cells in the lamina propria of small and large intestine (2,28,36). Increased MAdCAM-1 expression has been described in the colonic microvasculature of different animal models of colitis (15,21). Similarly, immunohistochemical methods have revealed that MAdCAM-1 is upregulated in the inflamed colonic mucosa of humans with ulcerative colitis or Crohn's disease (3,32). ...

Vascular addressins: Tissue selective endothelial adhesion molecules for lymphocyte homing
  • Citing Article
  • December 1991

... Over the last decades, VHHs have progressively raised greater interest because of their specific properties. Indeed, they combine the high affinity and selectivity of conventional antibodies with the advantages of small proteins: in particular, they diffuse more readily into tissues owing to their small size and are able to reach intracellular antigens (16)(17)(18)(19)(20)(21), which allows them to be widely used for imaging. ...

Functional inhibition of β-catenin-mediatedWnt signaling by intracellular VHHantibodies
mAbs

mAbs

... 99 Similarly, doublefunctionalized MWCNTs served as probes of an aspect-ratio-governed affinity to tissues higher found for 10-nm-thin MWCNTs. 100 Amidation was also employed to functionalize MWCNT-COOH with 2,2':6'2"-terpyridine- Under MW-irradiation, ester-functionalized SWCNTs underwent a (3+2)-cycloaddition reaction with nitrile imine, yielding a double-ester-terminated SWCNT cycloadduct. 106 In an attempt to develop thiol-terminated SWCNT templates, the ester terminals were further altered with 4-aminothiophenol. ...

The relationship between the diameter of chemically-functionalized multi-walled carbon nanotubes and their organ biodistribution, profiles in vivo
  • Citing Article
  • August 2014

Biomaterials

... We have previously reported comprehensive sequence-specific backbone resonance assignments for Dkk4FL at pH 5.5 (17), however, to allow NMR studies of Dkk4 binding to several functional partners (LRP6 and Krm1) backbone assignments were required to be extended to pH 6.5. 2D and 3D NMR spectra acquired for Dkk4FL at pH 6.5 and 5.5 showed relatively few changes, which is reflected in very similar backbone resonance assignments obtained under both conditions. ...

Resonance assignment and secondary structure determination of full length human Dickkopf 4 (hDkk4), a secreted, disulphide-rich Wnt inhibitor protein
  • Citing Article
  • May 2014

Biomolecular NMR Assignments

... Then, the bone volume (BV) and bone surface (BS) of the tarsal bones were calculated to assess changes in structure. The bone surface to bone volume ratio (BS/BV) was used to evaluate the periarticular bone surface density, which can indicate focal bone erosion [41]. ...

Effect of sclerostin-neutralising antibody on periarticular and systemic bone in a murine model of rheumatoid arthritis: A microCT study

Arthritis Research & Therapy

... Support for this model for both KIM185 and Mg 2 /EGTA-mediated activation of LFA-1 can be found with the study of the mAb KIM127. The epitope of the mAb KIM127 has been mapped to the IEGF-2 and IEGF-3 of the integrin 2 subunit (16,38). Superposition of the NMR structure of these two domains on the V 3 template (11) showed that the residues forming the epitope are buried (37). ...

Defining the repeating elements in the cysteine-rich region (CRR) of the CD18 integrin β2 subunit
  • Citing Article
  • September 2001