Luisa Nanni's research while affiliated with The Children's Hospital of Philadelphia and other places

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Publications (7)


SHH Mutation is associated with solitary median maxillary central incisor: A study of 13 patients and review of the literature
  • Literature Review

July 2001

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116 Reads

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170 Citations

American Journal of Medical Genetics

Luisa Nanni

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Jeffrey E. Ming

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Yangzhu Du

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[...]

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Maximilian Muenke

Solitary median maxillary central incisor (SMMCI) or single central incisor is a rare dental anomaly. It has been reported in holoprosencephaly (HPE) cases with severe facial anomalies or as a microform in autosomal dominant HPE (ADHPE). In our review of the literature, we note that SMMCI may also occur as an isolated finding or in association with other systemic abnormalities. These anomalies include short stature, pituitary insufficiency, microcephaly, choanal atresia, midnasal stenosis, and congenital nasal pyriform aperture stenosis. SMMCI can also be a feature of recognized syndromes or associations or a finding in patients with specific chromosomal abnormalities. We performed a molecular study on a cohort of 13 SMMCI patients who did not have HPE. We studied two genes, Sonic Hedgehog (SHH) and SIX3, in which mutations have been reported in patients showing SMMCI as part of the HPE spectrum. A new missense mutation in SHH (I111F), segregating in one SMMCI family, was identified. Our results suggest that this mutation may be specific for the SMMCI phenotype since it has not been found in the HPE population or in normal controls. Published 2001 Wiley-Liss, Inc.

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Molecular Genetics of Holoprosencephaly

April 2000

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48 Reads

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38 Citations

Frontiers in Bioscience

Holoprosencephaly (HPE) is a common developmental defect of the human forebrain and midface. Pathological studies have identified different categories of severity of the brain and craniofacial malformations observed in HPE, although the variable clinical spectrum of HPE extends in unbroken sequence from alobar HPE and cyclopia to clinically unaffected carriers in familial HPE. The etiology of HPE is extremely heterogeneous including both environmental and genetic causes. Here we focus on molecular aspects of HPE in light of the recent identification of some of the genes causing human HPE and other candidate genes involved in forebrain development, through different approaches, such as positional cloning and functional cloning, based on animal models. These approaches will aid in the identification of additional genes involved in HPE and in a better understanding of the molecular genetics of brain development.


Holoprosencephaly: Molecular study of a California Population

February 2000

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11 Reads

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49 Citations

American Journal of Medical Genetics

Holoprosencephaly (HPE) is a common developmental anomaly of the forebrain and midface in which the cerebral hemispheres fail to separate into distinct left and right halves. HPE is extremely heterogeneous. In addition to teratogenic agents, several genes are implicated in the cause of HPE. Using samples from a population-based birth defects registry in California, we performed a mutational analysis of the known HPE genes Sonic Hedgehog (SHH), ZIC2, and SIX3, in addition to two HPE candidate genes, TG-interacting factor (TGIF), and Patched (PTC), on a group of sporadic HPE patients. This is the first molecular study of HPE in a population-based sample of patients. Among these patients, a deletion in the homeodomain of SIX3 and several polymorphisms in SIX3 and TGIF were identified. No sequence changes were detected in SHH, ZIC2, and PTC. Our results suggest that mutations in the currently recognized HPE genes may explain <5% of all sporadic HPE cases.


Table 1. Summary of sequence variations in the SHH gene 
Figure 2. (A) Location of mutations in SHH in individuals with HPE. The mutations are distributed evenly between the coding regions. SHH-N, signaling domain; SHH-C, autocatalytic cleavage and cholesterol transferase domain; #, insertion; star, frameshift deletion; solid circle, missense mutations; solid diamond, nonsense mutations; *, deletions; SP, signal peptide, removed after translation; ↓, cleavage/cholesterol addition. (B) Amino acid sequence alignment for human Sonic (hSHH), mouse Sonic (mShh), chicken Sonic (cShh), zebrafish Sonic (zShh), and Drosophila hedgehog (dhh). The locations of the predicted amino acid changes in HPE patients are shown in blue (8,23,24; present study). Amino acids conserved between species are shown in red. The positions of the splice sites of exons 1, 2 and 3 are indicated by arrows and a gap is introduced in the protein sequence to mark the position of the autocatalytic cleavage between Gly197 and Cys198 of the human protein. The residues essential for hedgehog autoprocessing activity in Drosophila are in green (see text).  
Figure 1. Pedigrees for the nine families carrying SHH mutations. Solid symbols, HPE phenotype; half-solid symbols, MC, OH, CLP, DD or SCI; symbols enclosing a dot, clinically unaffected mutation carriers; *, tested individuals with normal SHH sequence. The following individuals were not available for the study: III.7 in pedigree A; II.2 and III.4 in pedigree C; II.1 in pedigree 0; II.2, II.6 and II.7 in pedigree I. For clinical details and abbreviations, see Table 2.  
The Mutational Spectrum of the Sonic Hedgehog Gene in Holoprosencephaly: SHH Mutations Cause a Significant Proportion of Autosomal Dominant Holoprosencephaly
  • Article
  • Full-text available

January 2000

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387 Reads

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351 Citations

Human Molecular Genetics

Holoprosencephaly (HPE) is a common developmental anomaly of the human forebrain and midface where the cerebral hemispheres fail to separate into distinct left and right halves. We have previously reported haploinsufficiency for Sonic Hedgehog ( SHH ) as a cause for HPE. We have now performed mutational analysis of the complete coding region and intron-exon junctions of the SHH gene in 344 unrelated affected individuals. Herein, we describe 13 additional unrelated affected individuals with SHH mutations, including nonsense and missense mutations, deletions and an insertion. These mutations occur throughout the extent of the gene. No specific genotype-phenotype association is evident based on the correlation of the type or position of the mutations. In conjunction with our previous studies, we have identified a total of 23 mutations in 344 unrelated cases of HPE. They account for 14 cases of familial HPE and nine cases of sporadic HPE. Mutations in SHH were detected in 10 of 27 (37%) families showing autosomal dominant transmission of the HPE spectrum, based on structural anomalies. Interestingly, three of the patients with an SHH mutation also had abnormalities in another gene that is expressed during forebrain development. We suggest that the interactions of multiple gene products and/or environmental elements may determine the final phenotypic outcome for a given individual and that variations among these factors may cause the wide variability in the clinical features seen in HPE.

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Mutations in the homeodomain of the human SIX3 gene cause holoprosencephaly

July 1999

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306 Reads

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391 Citations

Nature Genetics

Holoprosencephaly (HPE) is a common, severe malformation of the brain that involves separation of the central nervous system into left and right halves. Mild HPE can consist of signs such as a single central incisor, hypotelorism, microcephaly, or other craniofacial findings that can be present with or without associated brain malformations. The aetiology of HPE is extremely heterogeneous, with the proposed participation of a minimum of 12 HPE-associated genetic loci as well as the causal involvement of specific teratogens acting at the earliest stages of neurulation. The HPE2 locus was recently characterized as a 1-Mb interval on human chromosome 2p21 that contained a gene associated with HPE. A minimal critical region was defined by a set of six overlapping deletions and three clustered translocations in HPE patients. We describe here the isolation and characterization of the human homeobox-containing SIX3 gene from the HPE2 minimal critical region (MCR). We show that at least 2 of the HPE-associated translocation breakpoints in 2p21 are less than 200 kb from the 5' end of SIX3. Mutational analysis has identified four different mutations in the homeodomain of SIX3 that are predicted to interfere with transcriptional activation and are associated with HPE. We propose that SIX3 is the HPE2 gene, essential for the development of the anterior neural plate and eye in humans.

Citations (7)


... Approximately 18% to 25% of HPE cases have a recognizable monogenic syndrome and up to 45% of live births with HPE have nonrandom chromosomal abnormalities. [11] Other authors have shown the presence of monogenic syndrome, including the Smith-Lemli-Opitz, Pallister-Hall, and Rubinstein-Taybi syndromes and most frequently numeric anomalies in chromosomes 13 (Patau syndrome), 18 (Edwards syndrome), and 21 (Down syndrome) and structural anomalies involving 13q, 18p,7q36, 3p24-pter, 2p21, and 21q22.3. [12] Studying HPE on a molecular level has led to the identification of the HPE genes: Sonic Hedgehog (SHH), ZIC2, and SIX3, in addition to several candidate genes. ...

Reference:

Alobar holoprosencephaly associated with a rare chromosomal abnormality: Case report and literature review
Molecular Genetics of Holoprosencephaly
  • Citing Article
  • January 2000

Fetal and Pediatric Pathology

... Removal or inhibition of Shh cause abnormalities in the midline structure of the cranio-maxillofacial, such as holoprosencephaly (HPE), hypotelorism, and/or a single upper incisor. 43,44 The E7.5-vismodegib group showed similar phenotypes, including a single upper central incisor, reduced depth of the median central notch of the upper lip (data not shown), reduced ossification in the middle of the sphenoid bone, and cleft of the secondary palate, related to microform HPE. 44 The E7.5-vismodegib group also showed marked thinning of the cranial base cartilage, which may be secondary to the absence of pituitary after Shh signaling is suppressed, 45 since Shh is necessary for pituitary development. ...

The mutational spectrum of the Sonic Hedgehog gene in haloprosencephaly: SHH mutations cause a significant proportion of autosomal dominant holoprosencephaly.
  • Citing Article
  • October 1999

The American Journal of Human Genetics

... Moreover, recently it was found that, SMMCI syndrome is also association with oromandi bular; limb hypogenesis syndrome type I in the literature. 7 Nanni et al. suggested that a missense mutation in the Sonic Hedgehog (SHH) gene at 7q36 may be associated with SMMCI although the etiology of SMMCI condition is not precisely certain. Gene mutation studies conducted in SMMCI patients, showed that most patients were in the HPE genes: SHH, SIX3, ZIC2, TGIF, GLI2, and PTCH. ...

SHH Mutation is associated with solitary median maxillary central incisor: A study of 13 patients and review of the literature
  • Citing Article
  • July 2001

American Journal of Medical Genetics

... The genetic basis for multiple Mendelian conditions was initially identified by studying individuals harboring chromosomal translocations, which provided a signpost for where in the genome a gene was disrupted. It quickly became apparent that many of these chromosomal translocations did not disrupt coding sequence, but rather disrupted the positioning of coding sequence relative to a distal regulatory element or gene promoter (Vortkamp et al. 1991;Wallis et al. 1999;Fang et al. 2000;Crisponi et al. 2001). These initial studies helped establish that non-coding genetic variation can cause numerous Mendelian conditions, and work over the past several decades has solidified the central role of non-coding genetic variation in the pathogenesis of hundreds of Mendelian conditions. ...

Mutations in the homeodomain of the human SIX3 gene cause holoprosencephaly

Nature Genetics

... It codes for a transcription factor that competitively inhibits the binding of the retinoid X receptor (RXR) to a retinoidresponsive promotor [20]. Therefore, decreased TGIF levels enhance the binding of RXR and result in overactivity of retinoic acid regulated genes, simulating the effect of excessive retinoic acid exposure, which is a wellknown teratogenic factor [21][22][23]. Moreover, a decreased activity of TGIF can change the Nodal/TGF-b signaling pathway, also resulting in HPE [24]. ...

The Mutational Spectrum of the Sonic Hedgehog Gene in Holoprosencephaly: SHH Mutations Cause a Significant Proportion of Autosomal Dominant Holoprosencephaly

Human Molecular Genetics

... 5 The exact aetiology for the occurrence is unclear but genetic attribution may account for 25 to 45%. 6 It has been linked to various monogenic syndromes like Smith-Lemli-Opitz syndrome and Pallister Hall or velo-cardio-facial syndrome. 7 Mutation of SHH (Sonic Hedge Hog) genes involved in the development of central nervous system mainly cause holoprosencephaly, although a total of 14 gene mutations have been implicated. ...

Molecular Genetics of Holoprosencephaly
  • Citing Article
  • April 2000

Frontiers in Bioscience

... The mutation frequency observed in the present study was 12/119 (10.1%; 5.6-17.3). Dubourg et al. (2004) reported a similar rate of 17% in fetuses and living children with normal karyotypes, while Nanni et al. (2000) observed mutation in only one case studied, representing 4.3% of the sample of newborn cases in a population from California. Lazaro et al. (2004) observed a similar frequency of 16% when considering syndromic and nonsyndromic HPE and patients with midline facial and/or cerebral anomalies without neuroradiological HPE. ...

Holoprosencephaly: Molecular study of a California Population
  • Citing Article
  • February 2000

American Journal of Medical Genetics