Kseniya S. Kovaleva's research while affiliated with Novosibirsk Institute of Organic Chemistry and other places

Publications (21)

Article
Full-text available
New imidazolidine-2,4,5-triones with norabietic, nordehydroabietic, and adamantane substituents were synthesized by reacting oxalyl chloride and the corresponding ureas, providing good yields. Bioisosteric replacement of the ureide group with a parabanic acid fragment made it possible to increase the solubility of compounds and conduct biological s...
Article
Full-text available
For the first time, an effective method for the synthesis of spirocyclic camphor‐ and fenchone‐based 1,3,4‐oxadiazolines has been developed. The influence of the molecular structure of the terpene substrate on the reaction stereoselectivity was studied. The structural features of the target products were studied using NMR spectroscopy and X‐ray dif...
Article
Earlier, it was found that the agent KS-389, a conjugate of dehydroabietylamine and 1-aminoadamantane, possess inhibiting activity with regard to Tdp1. It this study, LC-MS/MS-based methods of quantification of KS-389 in mice blood and several organs (brain, liver and kidney) were developed and validated. Validation of the methods was performed acc...
Article
Full-text available
The Ritter reaction of humulene with acetonitrile occurs as the biomimetic process to afford the amide having the skeleton of a natural alcohol. The structures of the amides obtained from humulene and caryophyllene were confirmed by XRD data. The activity of some cage compounds against influenza virus allowed one to suggest the mechanism of antivir...
Article
Full-text available
A set of heterocyclic products was synthesized from natural (+)-camphor and semi-synthetic (−)-camphor. Then, 2-Imino-4-thiazolidinones and 2,3-dihydrothiazoles were obtained using a three-step procedure. For the synthesized compounds, their antiviral activity against the vaccinia virus and Marburg virus was studied. New promising agents active aga...
Article
Full-text available
In this work, a library of (+)‐camphor and (−)‐fenchone based N‐acylhydrazones, amides, and esters, including para‐substituted aromatic/hetaromatic/cyclohexane ring was synthesized, with potent orthopoxvirus inhibitors identified among them. Investigations of the structure‐activity relationship revealed the significance of the substituent at the pa...
Conference Paper
A new class of tyrosyl-DNA phosphodiesterase 1 (TDP1) inhibitors has been found among resin acid derivatives. Several novel bisureas derived from dehydroabietylamine (DHAm) were synthesized and tested for TDP1 inhibition. The synthesized compounds showed IC50 values in the range of 0.09 to 0.19 µM. Several compounds demonstrated the enhancement of...
Conference Paper
We have developed a cytopathic model using an MTT test for viruses Hantaan 76-118 and for Puumala 967. Our research has shown that ribavirin is not active with the viruses under study, while being fairly toxic to CC50 20 µM. Triazavirin was active for Hantaan 76-118 in a dose of IC50 14±3 µM, and for Puumala 967 IC50 12±3 µM. The toxicity of Triaza...
Article
Full-text available
A number of framework amides with a ginsenol backbone have been synthesized using the Ritter reaction. We named the acetamide as Ginsamide. A method was developed for the synthesis of the corresponding amine and thioacetamide. The new compounds revealed a high activity against H1N1 influenza, which was confirmed using an animal model. Biological ex...
Article
Full-text available
Tyrosyl-DNA phosphodiesterase 1 (TDP1) is a DNA repair enzyme that plays a key role in repairing damage caused by various antitumor drugs. It is a promising target in medicinal chemistry for the creation of cancer adjuvant therapy. Inhibition of this enzyme together with the use of anticancer chemotherapy enhances the effect of the latter. The natu...
Article
Full-text available
In this paper, a series of novel abietyl and dehydroabietyl ureas, thioureas, amides, and thioamides bearing adamantane moieties were designed, synthesized, and evaluated for their in-hibitory activities against tyrosil-DNA-phosphodiesterase 1 (TDP1). The synthesized compounds were able to inhibit TDP1 at micromolar concentrations (0.19-2.3 µM) and...
Article
This work presents the design and synthesis of camphor, fenchone, and norcamphor N-acylhydrazone derivatives as a new class of inhibitors of the Hantaan virus, which causes haemorrhagic fever with renal syndrome (HFRS). A cytopathic model was developed for testing chemotherapeutics against the Hantaan virus, strain 76-118. In addition, a study of t...
Article
Full-text available
A new class of tyrosyl-DNA phosphodiesterase 1 (TDP1) inhibitors was found among resin acid derivatives. Several novel ureas and thioureas derived from dehydroabietylamine were synthesized and tested for TDP1 inhibition. The synthesized compounds showed IC50 values in the range of 0.1 to 3.7 μM and demonstrated low cytotoxicity against the human tu...
Article
Full-text available
The design and synthesis of a series of novel D-(+)-camphor N-acylhydrazones possessing inhibitory activity against vaccinia and influenza viruses are presented. An easy pathway to camphor based N-acylhydrazones containing in their structure aliphatic, aromatic, and heterocyclic pharmacophore scaffolds has been developed. The conformation and confi...
Article
New derivatives of dehydroabietylamine were obtained by transformation of primary amino group to pyrrolidine, piperidine, azepane, morpholine, isoindoline, and pyrrole heterocycles. The obtained compounds were tested for antiviral activity against influenza A/California/07/09 (H1N1)pdm09 strain, as well as the activity against some types of bacteri...
Article
The three-component condensation reaction of primary amines, formaldehyde and 2-mercaptoethanol using salts of transition and rare earth metals as catalysts was developed to obtain a new 7-membered heterocyclic structural building block, 1,5,3-oxathiazepanes, in good to excellent yields. The structure of the heterocyclic fragment was confirmed by N...
Article
Here, we report the synthesis of a series of dehydroabietylamine (DAA) salts. We studied the cytotoxic activity of DAA salts and their and antiviral properties against influenza virus A(H1N1)pdm09 We further compared these parameters to those of DAA itself and to organic acids used as counterions. We observed that the DAA, its hydrochloride (DAA∙H...

Citations

... Since the properties of isatin derivatives as inhibitors of the main viral protease of coronoviruses were previously described in the literature, we performed inhibitors of orthopoxiviruses and influenza viruses [32], these compounds being of particular interest as effective inhibitors of Hantaan viruses causing hemorrhagic fever with renal syndrome, a zoonotic viral disease for which there is currently no effective chemotherapy [33]. An effective and stereoselective method for the synthesis of spiro derivatives based on camphor and fenchone hydrazones has recently been described [34]. ...
... Te elution systems consisting of methanol, acetonitrile, water, and formate water were compared according to the physicochemical properties and the chromatographic behavior of the analytes [20,[22][23][24]. Te results show that the separation efect of methanol-water or acidic water as system components was not ideal, but the optimized separation efect of acetonitrile-water-formic acid system components was better, and each chromatographic peak separation and the theoretical number of trays met the requirements. ...
... We have shown a convenient synthesis of N-heterocyclic compounds by direct alkylation of hydrazones with aliphatic dihalides; the reaction of hydrazones with 1,2-ethanediol in the presence of formaldehyde with the addition of samarium nitrate leads to the formation of compounds containing a 1,5,3-dithioazepane fragment [30]. By the reaction of camphor hydrazone with various isothiacyanates, N-substituted thiosemicarbazones were obtained, on the basis of which a significant set of 2-iminothiazolidine-4-ones and 2,3-dihydrothiazolones were synthesized [31]. Among the described heterocyclic derivatives, compounds active against smallpox vaccine and effective inhibitors of the entry of the Marburg virus were found. ...
... Our research team is actively working in the field of searching for new effective agents with a wide range of antiviral properties based on terpene series compounds [26,27]. It has been shown that the presence of a bicyclic frame fragment is extremely important for the manifestation of antiviral activity [28,29]. A simple and convenient method of introducing an amino group into a natural backbone, suitable for further transformations, is the synthesis of hydrazones from natural ketones. ...
... The binding of stachyflin increases the energy barrier required for this conformational transition and the formation of one α-helix. Another compound, ginsamide (28) [72], exhibiting pronounced activity against influenza virus can bind at the CPH site by contacting V2115. This binding site was selected based on the similarity of the pharmacophoric profiles of camphecene and ginsamide ( Figure 9B) as well as based on the result of sequencing a ginsamide-resistant influenza A virus. ...
... Attractive substance classes for the creation of new TDP1 inhibitors based on them are not only derivatives of dehydroabietic acid, but also other resin acids. Previously, our team obtained ureas with nordehydroabietic 6a-b and norabietic fragments 7a-b in the structure ( Figure 2) [14]. The influence of the type of attachment of the adamantane fragment-in the first or second position of the scaffold-was studied. ...
... Since the properties of isatin derivatives as inhibitors of the main viral protease of coronoviruses were previously described in the literature, we performed inhibitors of orthopoxiviruses and influenza viruses [32], these compounds being of particular interest as effective inhibitors of Hantaan viruses causing hemorrhagic fever with renal syndrome, a zoonotic viral disease for which there is currently no effective chemotherapy [33]. An effective and stereoselective method for the synthesis of spiro derivatives based on camphor and fenchone hydrazones has recently been described [34]. ...
... In a series of dehydroabiethylamine derivatives carrying a 2-iminothiazolidine-4thione or 2-thioxoimidazolidine-4-thione moiety (compounds 59 and 60, Figure 16), the IC 50 values were in the same concentration range as compared to adamantyl derivatives (0.19 to 1.1 µM) [88]. For heterocyclic derivatives, a pattern was noted: enlargement of the substituent lowered the IC 50 [88]. ...
... For the first time, the synergistic effect of compound 5 with the alkylating agent temozolomide was studied on glioblastoma lines. The leading compound is able to improve its cytostatic properties by up to 40% ( Figure 2) [13]. ...
... The analysis of these data suggests that in the both compounds the C=N bond of the isatin fragment has an E-configuration, and in the case of camphor the C=N bond of the monoterpene fragment in substance 6 has an E-configuration, and a Z-configuration in the case of fenchone in compound 7. We have previously shown that initial hydrazones 4 and 5 are in the form of a single isomer in a DMSO-d 6 or CHCl 3 solution [32]. An indirect proof of this mutual arrangement of the isatin and monoterpene fragments is the presence of cross peaks between H and 10-Me in the NOESY spectra (Fig. 1). ...