Juan M. Jiménez's research while affiliated with University of Massachusetts Amherst and other places

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Publications (21)


Cytoskeletal Remodeling and Gap Junction Translocation Mediates Blood-Brain Barrier Disruption by Non-invasive Low-Voltage Pulsed Electric Fields
  • Article

April 2023

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38 Reads

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3 Citations

Annals of Biomedical Engineering

Neeraj Raghuraman Rajagopalan

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Masashi Fujimori

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Govindarajan Srimathveeravalli

High-voltage pulsed electric fields (HV-PEF) delivered with invasive needle electrodes for electroporation applications is known to induce off-target blood-brain barrier (BBB) disruption. In this study, we sought to determine the feasibility of minimally invasive PEF application to produce BBB disruption in rat brain and identify the putative mechanisms mediating the effect. We observed dose-dependent presence of Evans Blue (EB) dye in rat brain when PEF were delivered with a skull mounted electrode used for neurostimulation application. Maximum region of dye uptake was observed while using 1500 V, 100 pulses, 100 µs and 10 Hz. Results of computational models suggested that the region of BBB disruption was occurring at thresholds of 63 V/cm or higher; well below intensity levels for electroporation. In vitro experiments recapitulating this effect with human umbilical vein endothelial cells (HUVEC) demonstrated cellular alterations that underlie BBB manifests at low-voltage high-pulse conditions without affecting cell viability or proliferation. Morphological changes in HUVECs due to PEF were accompanied by disruption of actin cytoskeleton, loss of tight junction protein-ZO-1 and VE-Cadherin at cell junctions and partial translocation into the cytoplasm. Uptake of propidium iodide (PI) in PEF treated conditions is less than 1% and 2.5% of total number of cells in high voltage (HV) and low-voltage (LV) groups, respectively, implying that BBB disruption to be independent of electroporation under these conditions. 3-D microfabricated blood vessel permeability was found to increase significantly following PEF treatment and confirmed with correlative cytoskeletal changes and loss of tight junction proteins. Finally, we show that the rat brain model can be scaled to human brains with a similar effect on BBB disruption characterized by electric field strength (EFS) threshold and using a combination of two bilateral HD electrode configurations.

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Lymphoedema conditions disrupt endothelial barrier function in vitro
  • Article
  • Publisher preview available

August 2022

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35 Reads

Journal of the Royal Society Interface

Journal of the Royal Society Interface

Lymphatic vessel contractions generate net antegrade pulsatile lymph flow. By contrast, impaired lymphatic vessels are often associated with lymphoedema and altered lymph flow. The effect of lymphoedema on the lymph flow field and endothelium is not completely known. Here, we characterized the lymphatic flow field of a platelet-specific receptor C-type lectin-like receptor 2 (CLEC2) deficient lymphoedema mouse model. In regions of lymphoedema, collecting vessels were significantly distended, vessel contractility was greatly diminished and pulsatile lymph flow was replaced by quasi-steady flow. In vitro exposure of human dermal lymphatic endothelial cells (LECs) to lymphoedema-like quasi-steady flow conditions increased intercellular gap formation and permeability in comparison to normal pulsatile lymph flow. In the absence of flow, LECs exposed to steady pressure (SP) increased intercellular gap formation in contrast with pulsatile pressure (PP). The absence of pulsatility in steady fluid flow and SP conditions without flow-induced upregulation of myosin light chain (MLCs) regulatory subunits 9 and 12B mRNA expression and phosphorylation of MLCs, in contrast with pulsatile flow and PP without flow. These studies reveal that the loss of pulsatility, which can occur with lymphoedema, causes LEC contraction and an increase in intercellular gap formation mediated by MLC phosphorylation.

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Proper Orthogonal Decomposition Analysis Reveals Cell Migration Directionality During Wound Healing

July 2022

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25 Reads

Annals of Biomedical Engineering

A proper orthogonal decomposition (POD) order reduction method was implemented to reduce the full high dimensional dynamical system associated with a wound healing cell migration assay to a low-dimensional approximation that identified the prevailing cell trajectories. The POD analysis generated POD modes that were representative of the prevalent cell trajectories. The shapes of the POD modes depended on the location of the cells with respect to the wound and exposure to disturbed (DF) or undisturbed (UF) fluid flow where the net flow was in the antegrade direction with a retrograde component or fully antegrade, respectively. For DF and UF, the POD modes of the downstream cells identified trajectories that moved upstream against the flow, while upstream POD modes exhibited sideways cell migrations. In the absence of flow, no major shape differences were observed in the POD modes on either side of the wound. The POD modes also served to reconstruct the cell migration of individual cells. With as few as three modes, the predominant cell migration trajectories were reconstructed, while the level of accuracy increased with the inclusion of more POD modes. The POD order reduction method successfully identified the predominant cell migratory trajectories under static and varying pulsatile fluid flow conditions serving as a first step in the development of artificial intelligence models of cell migration in disease and development.


PGC1α Regulates the Endothelial Response to Fluid Shear Stress via Telomerase Reverse Transcriptase Control of Heme Oxygenase-1

November 2021

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77 Reads

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9 Citations

Arteriosclerosis Thrombosis and Vascular Biology

Objective Fluid shear stress (FSS) is known to mediate multiple phenotypic changes in the endothelium. Laminar FSS (undisturbed flow) is known to promote endothelial alignment to flow, which is key to stabilizing the endothelium and rendering it resistant to atherosclerosis and thrombosis. The molecular pathways responsible for endothelial responses to FSS are only partially understood. In this study, we determine the role of PGC1α (peroxisome proliferator gamma coactivator-1α)-TERT (telomerase reverse transcriptase)-HMOX1 (heme oxygenase-1) during shear stress in vitro and in vivo. Approach and Results Here, we have identified PGC1α as a flow-responsive gene required for endothelial flow alignment in vitro and in vivo. Compared with oscillatory FSS (disturbed flow) or static conditions, laminar FSS (undisturbed flow) showed increased PGC1α expression and its transcriptional coactivation. PGC1α was required for laminar FSS-induced expression of TERT in vitro and in vivo via its association with ERRα(estrogen-related receptor alpha) and KLF (Kruppel-like factor)-4 on the TERT promoter. We found that TERT inhibition attenuated endothelial flow alignment, elongation, and nuclear polarization in response to laminar FSS in vitro and in vivo. Among the flow-responsive genes sensitive to TERT status, HMOX1 was required for endothelial alignment to laminar FSS. Conclusions These data suggest an important role for a PGC1α-TERT-HMOX1 axis in the endothelial stabilization response to laminar FSS.


Stent strut streamlining and thickness reduction promote endothelialization

August 2021

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33 Reads

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10 Citations

Journal of the Royal Society Interface

Journal of the Royal Society Interface

Stent thrombosis (ST) carries a high risk of myocardial infarction and death. Lack of endothelial coverage is an important prognostic indicator of ST after stenting. While stent strut thickness is a critical factor in ST, a mechanistic understanding of its effect is limited and the role of haemodynamics is unclear. Endothelialization was tested using a wound-healing assay and five different stent strut models ranging in height between 50 and 150 µm for circular arc (CA) and rectangular (RT) geometries and a control without struts. Under static conditions, all stent strut surfaces were completely endothelialized. Reversing pulsatile disturbed flow caused full endothelialization, except for the stent strut surfaces of the 100 and 150 µm RT geometries, while fully antegrade pulsatile undisturbed flow with a higher mean wall shear stress caused only the control and the 50 µm CA geometries to be fully endothelialized. Modest streamlining and decrease in height of the stent struts improved endothelial coverage of the peri-strut and stent strut surfaces in a haemodynamics dependent manner. This study highlights the impact of the stent strut height (thickness) and geometry (shape) on the local haemodynamics, modulating reendothelialization after stenting, an important factor in reducing the risk of stent thrombosis.


PGC1α Regulates the Endothelial Response to Fluid Shear Stress via Telomerase Reverse Transcriptase Control of Heme Oxygenase-1

May 2021

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30 Reads

Fluid shear stress (FSS) is known to mediate multiple phenotypic changes in the endothelium. Laminar FSS (undisturbed flow) is known to promote endothelial alignment to flow that is key to stabilizing the endothelium and rendering it resistant to atherosclerosis and thrombosis. The molecular pathways responsible for endothelial responses to FSS are only partially understood. Here we have identified peroxisome proliferator gamma coactivator-1α (PGC-1α) as a flow-responsive gene required for endothelial flow alignment in vitro and in vivo. Compared to oscillatory FSS (disturbed flow) or static conditions, laminar FSS (undisturbed flow) increased PGC-1α expression and its transcriptional co-activation. PGC-1α was required for laminar FSS-induced expression of telomerase reverse transcriptase (TERT) in vitro and in vivo via its association with ERRα and KLF4 on the TERT promoter. We found that TERT inhibition attenuated endothelial flow alignment, elongation, and nuclear polarization in response to laminar FSS in vitro and in vivo. Among the flow-responsive genes sensitive to TERT status was heme oxygenase-1 (HMOX1), a gene required for endothelial alignment to laminar FSS. Thus, these data suggest an important role for a PGC-1α-TERT-HMOX1 axis in the endothelial stabilization response to laminar FSS.


Figure 1. Particulate matter sources vary from a wide range of both human and natural origins, including industrial processes, transport usage and natural causes such as volcanic eruptions. (a) PM enters the body through the nasal passages and mouth. (b) These molecules travel down the trachea and into the bronchi. (c) PM travel from the bronchi into the alveoli. (d) Within the alveoli gas exchange occurs crossing the epithelial-endothelial cell interface and into the blood capillaries. Once in the blood, PM can travel throughout the circulatory system.
Air pollution, human health and the benefits of trees: a biomolecular and physiologic perspective

January 2021

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560 Reads

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14 Citations

Arboricultural Journal

It is well accepted that particulate matter (PM) can affect human health detrimentally. Chronic and prolonged exposures to particulate matter with an aerodynamic diameter ranging between 2.5 and 10 microns (PM10), 0.1 and 2.5 microns (PM2.5) and less than 0.1 microns in size (UFPM), have been associated with cardiopulmonary diseases. PM is ubiquitously present in urban settings, while primarily absent in forest environments primarily due to the direct interception of airborne pollution particles by trees. Both short- and long-term exposure to trees in forested environments is associated with lower blood pressure and inflammation, as well as enhanced immune function. Additionally, exposure to volatile organic compounds (VOCs) actively released by trees is associated with improved health through enhanced natural killer cell activity, reduced inflammatory responses, and reduced psychological stress. This article presents the results of a literature review on the harmful health effects of air pollution in urban environments, and the potential of forested environments to promote health and disease prevention.


Lymphatic Valves Bifurcate Lymph Flow Into a Central Jet and a Slow-Moving Peri-Valvular Milieu

August 2020

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30 Reads

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4 Citations

Journal of Biomechanical Engineering

The lymphatic system plays a pivotal role in the transport of fats, waste, and immune cells, while also serving as a metastatic route for select cancers. Using live imaging and particle tracking, we experimentally characterized the lymph flow field distal from the inguinal lymph node in the vicinity of normal bileaflet and malformed unileaflet intraluminal valves. Particle tracking experiments demonstrated that intraluminal lymphatic valves concentrate higher velocity lymph flow in the center of the vessel, while generating adjacent perivalvular recirculation zones. The recirculation zones are characterized by extended particle residence times and low wall shear stress magnitudes in comparison to the rest of the lymphangion. A malformed unileaflet valve skewed high momentum lymph flow toward the endothelium on the vessel wall, generating a stagnation point and a much larger recirculation zone on the opposite wall. These studies define physical consequences of bileaflet and unileaflet intraluminal lymphatic valves that affect lymph transport and the generation of a heterogeneous flow field that affects the lymphatic endothelium nonuniformly. The characterized flow fields were recreated in vitro connecting different flow environments present in the lymphangion to a lymphatic endothelial cell pro-inflammatory phenotype. Unique and detailed insight into lymphatic flow is provided, with potential applications to a variety of diseases that affect lymph transport and drug delivery.


Bioelectronic protein nanowire sensors for ammonia detection

May 2020

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121 Reads

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64 Citations

Nano Research

Electronic sensors based on biomaterials can lead to novel green technologies that are low cost, renewable, and eco-friendly. Here we demonstrate bioelectronic ammonia sensors made from protein nanowires harvested from the microorganism Geobacter sulfurreducens. The nanowire sensor responds to a broad range of ammonia concentrations (10 to 106 ppb), which covers the range relevant for industrial, environmental, and biomedical applications. The sensor also demonstrates high selectivity to ammonia compared to moisture and other common gases found in human breath. These results provide a proof-of-concept demonstration for developing protein nanowire based gas sensors for applications in industry, agriculture, environmental monitoring, and healthcare.


Vascular factors affecting cancer metastasis. a) Cancer cells intravasate into blood vessels near or in the tumor to enter the systemic circulation, where they then extravasate into secondary metastatic sites. b) The important factors of the vasculature and endothelium focused on in this review that affect intravasation, circulation, and extravasation are EC heterogeneity, hemodynamics, and the extracellular matrix.
Common methods to vascularize biomaterials. a) Vasculogenesis models induce sprouting of ECs into a biomaterial. A schematic of a commonly used vasculogenesis model is displayed in the top right. This model allows visualization of trapped tumor cells (top left and middle, with arrows indicating trapped tumor cells or clusters of tumor cells), as well as extravasated tumor cells (bottom image arrows). b) Subtractive models create an empty space in a material that can be lined with ECs. In the top image, a collagen gel was polymerized over a needle, which was then removed, and the remaining empty space was perfused with ECs to create a single channel. In the bottom image, a carbohydrate lattice was 3D printed and then encapsulated in ECM mimic. The lattice can then be dissolved, with the resulting empty space perfused and lined with ECs. c) Additive models (3D bioprinting) directly deposit the biomaterial of choice as well as multiple cell types to build a model tissue from the ground up. Here, a bioprinter was used to print ECs, fibroblasts, and stem cells to create a thick vascularized tissue. (a) Bottom: reproduced with permission.43 Copyright 2013, PLoS One. Top and middle: reproduced with permission.85 Copyright 2017, Springer Nature. (b) Top: reproduced with permission.36 Copyright 2006, Elsevier. Bottom: reproduced with permission.35 Copyright 2012, Springer Nature. (c) Reproduced with permission.54 Copyright 2016, National Academy of Sciences.
Endothelial cell heterogeneity. a) Development of end‐organ EC from EPCs (left) is a multistep process affected by epigenetic factors and microenvironmental factors. Ultimately, the resulting capillary endothelium varies by tissue type. The endothelium can be continuous, fenestrated, or sinusoidal (right). b) The behavior of BMECs and HUVECs vary by source. Sprouting (left) and permeability (right) are less prominent in BMECs versus HUVECs. c) Tumor ECs associated with highly metastatic tumors have enrichment in genes corresponding to invasion, angiogenesis, drug resistance, and stemness. (a) Left: reproduced with permission.30 Copyright 2007, Lippincott Williams & Wilkins. Right: reproduced with permission.67 Copyright 2019, Lippincott. (b) Adapted with permission.29 Copyright 2019, Elsevier.
Hemodynamic effects on circulating tumor cells. a) Diagram of work by Follain et al., describing the pocketing of CTCs by endothelial cells that occurs at intermediate flow rates. While arrest and adhesion of CTCs to the endothelium occurs at low and intermediate flow rates, pocketing was only seen at intermediate flow rates. b) Zebrafish can be used to directly observe extravasation of CTCs. c) A subtractive method was used to create a vascularized collagen hydrogel (top) which can be perfused. This model was used with an MDA‐MB‐231 breast cancer and EC coculture (bottom right). Authors observed decreased gene expression of angiogenesis‐related factors at high shear stress (bottom left). (a) Reproduced with permission.14 Copyright 2018, Cell Press. (b) Reproduced with permission.77 Copyright 2017, Elsevier. (c) Adapted with permission.69 Copyright 2014, Taylor & Francis.
Biochemical and mechanical effects on vasculature. a) Interactions with the perivascular niche ECM can promote cancer cell exit from dormancy. An engineered model was used with a laminin rich ECM drip used to culture breast cancer cells on top of formed microvasculature. Biochemical cues were identified that promoted cancer cell dormancy (TSP‐1, perlecan, laminins, etc.) or micrometastatic outgrowth (periostin, fibronectin, tenascin C, etc.). b) Introducing gradients in modulus can create organized vasculogenesis, which may be important when engineering 3D vascularized models. PEGDA hydrogels that had either a uniform bulk modulus or a gradient in modulus were seeded with ECs. Vascular sprouting appeared more disorganized in the uniform modulus gel (bottom left) but was more organized in the gradient gel (bottom right). (a) Adapted with permission.78 Copyright 2013, Nature Publishing Group. (b) Adapted with permission.81 Copyright 2013, PLoS One.
Vascularized Biomaterials to Study Cancer Metastasis

January 2020

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43 Reads

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23 Citations

Cancer metastasis, the spread of cancer cells to distant organs, is responsible for 90% of cancer‐related deaths. Cancer cells need to enter and exit circulation in order to form metastases, and the vasculature and endothelial cells are key regulators of this process. While vascularized 3D in vitro systems have been developed, few have been used to study cancer, and many lack key features of vessels that are necessary to study metastasis. This review focuses on current methods of vascularizing biomaterials for the study of cancer, and three main factors that regulate intravasation and extravasation: endothelial cell heterogeneity, hemodynamics, and the extracellular matrix of the perivascular niche.


Citations (17)


... Operating at lower intensities reduces the risk of cellular damage and other side effects. Thus, L-PEF induces temporary and reversible opening of the BBB opening, allowing for precise control over drug delivery while minimising potential harm to brain tissue [123]. For example, Sharabi et al. demonstrated increased paracellular barrier leakage in vitro, using human BLEC. ...

Reference:

Breaking barriers: exploring mechanisms behind opening the blood–brain barrier
Cytoskeletal Remodeling and Gap Junction Translocation Mediates Blood-Brain Barrier Disruption by Non-invasive Low-Voltage Pulsed Electric Fields
  • Citing Article
  • April 2023

Annals of Biomedical Engineering

... Therefore, pharmacological activators such as KLF2 and KLF4 are promising drugs for the treatment of endothelial dysfunction and AS. Many drugs have been identified or repurposed as activators of KLF2 and/or KLF4, including statins such as HMG-CoA reductase inhibitors, resveratrol, histone deacetylase inhibitors (SAHA), and tannic acid (TA) 123 In addition, KLF2 is activated by a recently identified transcriptional activator of eNOS and endothelial cell inflammatory inhibitor ERK5. Recently, TA has been identified as a novel pharmacological activator of KLF2, activating KLF2 through the ERK5/MEF2 pathway. ...

PGC1α Regulates the Endothelial Response to Fluid Shear Stress via Telomerase Reverse Transcriptase Control of Heme Oxygenase-1
  • Citing Article
  • November 2021

Arteriosclerosis Thrombosis and Vascular Biology

... The second-generation DES devices, currently the most commonly used clinically, are developed with thinner struts (60-90 lm) while maintaining sufficient radial strength with platforms made of cobalt chromium, platinum chromium, or cobalt nickel alloys [27]. Thinner struts may reduce blood vessel damage, promote re-endothelialization, and decrease flow obstruction and thrombogenicity [28]. The choice of polymer is also important, as poorly biocompatible permanent polymer coatings used in first-generation DES increased the risk of very late stent thrombosis due to chronic inflammatory response and delayed endothelial healing [29]. ...

Stent strut streamlining and thickness reduction promote endothelialization
Journal of the Royal Society Interface

Journal of the Royal Society Interface

... High RWC aids in tolerance to air pollution, but RWC was higher at higher PM concentrations and lower at lower PM concentrations [62]. RWC loss from leaves is due to the accumulation of PM on the surface of the leaves and dissolved nutrients [63]. Zhang et al. [4] analyzed the impact of automobile exhaust-induced pollution along roadside plantations. ...

Air pollution, human health and the benefits of trees: a biomolecular and physiologic perspective

Arboricultural Journal

... However, as in adult mice, the overwhelming majority of KI67 + LECs in collecting vessels displayed low PROX1 levels ( Fig. 3 B and Fig. S2, A-C) and only a few cells PROX1 high KI67 + cells were observed in valves (Fig. 3 B and Fig. S2,. This result identifies the proliferating LECs as valve sinus or lymphangion cells and indicates that proliferation in the valve region mostly takes place in the valve sinus rather than on the leaflets, the latter being subjected to the highest levels of shear stress, which may preclude cell division (Pujari et al., 2020). ...

Lymphatic Valves Bifurcate Lymph Flow Into a Central Jet and a Slow-Moving Peri-Valvular Milieu
  • Citing Article
  • August 2020

Journal of Biomechanical Engineering

... Electrically conductive nanowires comprised of G. sulfurreducens pilin have applications in diversity of electronic devices (Fu et al., , 2021Guberman-Pfeffer et al., 2024;Lekbach et al., 2023;Liu, Ueki, et al., 2022;Smith et al., 2020). Most notably, heterologous expression of the G. sulfurreducens pilin gene in Escherichia coli has enabled precision genetic engineering of pilin-based nanowire properties to optimize nanowire conductivity and sensitivity and selectivity for electronic sensing applications (Lekbach et al., 2023;Ueki et al., 2020). ...

Bioelectronic protein nanowire sensors for ammonia detection
  • Citing Article
  • May 2020

Nano Research

... Recently, breast cancer-on-a-chip systems started to integrate 3D spheroid cultures under continuous perfusion flow to predict drug responses by reproducing functional units of the cancerous tissue [19]. Metastasis is the spread of cancer cells from the primary tumor site, where circulating tumor cells enter the circulatory system, and those evading the immune surveillance system migrating to secondary sites (e.g., bone, liver, lung, and brain in metastatic breast cancer) [20]. In fact, the vascular network contributes not only to providing tumor cells with nutrients, oxygen, and toxic waste removal but also to other neoplastic mechanisms, including cell invasion, metastasis, and therapeutic resistance [21]. ...

Vascularized Biomaterials to Study Cancer Metastasis
Advanced Healthcare Materials

Advanced Healthcare Materials

... Экспрессия гена тканевого фактора обусловлена повышенной транскрипцией в ответ на активацию внутриклеточных сигнальных систем, запускаемых механочувстви-тельными структурами клеточной мембраны [48], такими как механочувствительные катионные каналы Piezo1 [49]. Длительная иммобилизация, приводящая к замедлению кровотока в венах, вызывает снижение экспрессии периклапанными эндотелиоцитами факторов транскрипции FOXC2 и PROX1, что вызывает повышение локальной концентрации протромботических белков (фактора Виллебранда, P-селектина, ICAM-1) и снижение уровня антикоагулянтов (протеина C, ингибитора пути тканевого фактора -TFPI) [50]. ...

Hemodynamic regulation of perivalvular endothelial gene expression prevents deep venous thrombosis
  • Citing Article
  • November 2019

The Journal of clinical investigation

... [6][7][8][9][10][11][12] Deoxyribonucleic acid (DNA), a genetic material, has been used in different biological applications, such as disease prevention, inflammation inhibition, tissue regeneration, bioimaging, biosensing, diagnosis and therapeutics. [13][14][15][16][17][18][19][20] In DNA hybridization, the target, unknown single-stranded DNA (ssDNA), is recognized and created by a probe single-stranded DNA (ssDNA) and a double-stranded DNA (ds-DNA) helix structure with two complementary strands. It can be stated that, the hybridization reaction is known to be extremely efficient and specific in the presence of a mixture of diverse non-complementary nucleic acids. ...

Microfluidic DNA-based potassium nanosensors for improved dialysis treatment

BioMedical Engineering OnLine

... Oliazadeh et al. pointed out that it is likely that AIS phenotypic heterogeneity is a result of the combination of genetic variations and biomechanical forces that are influenced by an individual's behavior patterns [22]. Davies et al. adeptly described the role biomechanics might play in altering gene expression via epigenetic pathways [23]. In summary, while genetics undoubtedly play a crucial role in the initiation and development of AIS, it seems evident that there is an environmental factor that will provide the key to unlocking the mystery of the underlying aetiology of AIS. ...

Biofluids, Cell Mechanics and Epigenetics:Flow-induced Epigenetic Mechanisms of Endothelial Gene Expression
  • Citing Article
  • November 2016

Journal of Biomechanics