Felipe E. E. S. Gomes's research while affiliated with Universidade Federal do Rio Grande do Norte and other places

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Publications (1)


TABLE 1 | Presence of homing endonuclease genes (HEGs) in mitochondrial LSU rRNA introns from C. neoformans and C. gattii. 
FIGURE 2 | Intron PCR-size variation of the mitochondrial LSU rRNA gene among different genotypes of C. neoformans and C. gattii. The size polymorphisms for group I intron PCR products were associated with the molecular type. PCR-product sizes for each genotype are indicated. The 300 bp fragment indicates absence of any intron elements. 
TABLE 2 | Intron presence is over-represented in non-virulent genotypes. 
FIGURE 3 | Distribution of group I introns in mitochondrial LSU rRNA of C. neoformans and C. gattii isolates. The scheme shows the order of the introns within the LSU rRNA gene observed after alignment of the sequenced samples. Introns are separated by conserved regions of the mitochondrial genome. Triangles indicate the annealing regions of the CryLSUF and CryLSUR primers flanking all the introns. The different sizes for each intron as well as the exon ("E") regions are shown in the figure. 
TABLE 3 | Ordered logistic models used to estimate the effect of intron and species on MIC. 

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Polymorphism in Mitochondrial Group I Introns among Cryptococcus neoformans and Cryptococcus gattii Genotypes and Its Association with Drug Susceptibility
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February 2018

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14 Citations

Frontiers in Microbiology

Frontiers in Microbiology

Felipe E. E. S. Gomes

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Thales D. Arantes

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Raquel C. Theodoro

Cryptococcosis, one of the most important systemic mycosis in the world, is caused by different genotypes of Cryptococcus neoformans and Cryptococcus gattii, which differ in their ecology, epidemiology, and antifungal susceptibility. Therefore, the search for new molecular markers for genotyping, pathogenicity and drug susceptibility is necessary. Group I introns fulfill the requisites for such task because (i) they are polymorphic sequences; (ii) their self-splicing is inhibited by some drugs; and (iii) their correct splicing under parasitic conditions is indispensable for pathogen survival. Here, we investigated the presence of group I introns in the mitochondrial LSU rRNA gene in 77 Cryptococcus isolates and its possible relation to drug susceptibility. Sequencing revealed two new introns in the LSU rRNA gene. All the introns showed high sequence similarity to other mitochondrial introns from distinct fungi, supporting the hypothesis of an ancient non-allelic invasion. Intron presence was statistically associated with those genotypes reported to be less pathogenic (p < 0.001). Further virulence assays are needed to confirm this finding. In addition, in vitro antifungal tests indicated that the presence of LSU rRNA introns may influence the minimum inhibitory concentration (MIC) of amphotericin B and 5-fluorocytosine. These findings point to group I introns in the mitochondrial genome of Cryptococcus as potential molecular markers for antifungal resistance, as well as therapeutic targets.

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Citations (1)


... In pathogenic Cryptococcus, the distribution and polymorphism of group I introns were described in the mitochondrial genes mtLSU or 23S (Gomes et al., 2018) and cob and cox1 (Gomes et al., 2023) of approximately 80 isolates belonging to different genotypes. These studies showed that C. neoformans species complex has fewer introns compared to C. gattii complex and differentiating the cryptic species using a single intron is not feasible. ...

Reference:

Group I introns: Structure, splicing and their applications in medical mycology
Polymorphism in Mitochondrial Group I Introns among Cryptococcus neoformans and Cryptococcus gattii Genotypes and Its Association with Drug Susceptibility
Frontiers in Microbiology

Frontiers in Microbiology