António Luís Correia's research while affiliated with Association for Innovation and Biomedical Research on Light and Image and other places

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Publications (8)


Optical coherence tomography in LRRK2-associated Parkinson Disease (P2.147)
  • Article

April 2015

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4 Reads

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3 Citations

Neurology

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[...]

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António Freire
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Fig. 1. One sample of a surface mesh for a sphere with a cubic domain.
Fig. 2. Normalized plot of d/d✓ for all scattering angles between 0 and 180 degrees.
Fig. 3. Polar plot of d/d✓ for all scattering angles between 0 and 360 degrees.
Maxwell's equations based 3D model of light scattering in the retina
  • Conference Paper
  • Full-text available

January 2015

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135 Reads

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Simulation of DME changes on OCT

September 2014

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40 Reads

Acta Ophthalmologica

Purpose To identify the changes at the cellular level responsible for the differences seen in OCT scans of DME patients. Methods Cirrus HD‐OCT (Carl Zeiss Meditec, Dublin, CA, USA) scans of DME eyes (12 eyes of 8 patients: 68.9±7.5 yrs) and healthy control (HC) eyes (12 eyes of 11 controls: 63.0±3.6 yrs) were acquired from our database. The ONL was segmented by a human grader (AC) and each segmentation was aligned to its upper boundary, averaged into an A‐scan and then normalized by the intensity at the RPE to discard the effect of media opacities. To understand the significant differences found between the profiles of DME and HC, a Monte Carlo method for simulating light scattering with a model of the ONL was implemented. The inputs for the method are calculated using Mie theory by assuming that the ONL may be modelled as a homogeneous medium filled with nuclei. Changes in each model parameter (e.g. nucleus' size) were tested and compared with the measured profile to identify which cellular change could best reproduce the OCT differences found between HC and DME patients. Moreover, the DME group was divided into those without significant visible changes and those with increased ONL volume. Results The simulation method successfully reproduced the differences observed between the HC and DME groups. For the DME cases with increased volume, it was possible to match the simulated and acquired profiles by using the measured increase in ONL thickness. In the DME case with no significant changes, it was necessary to increase only the nucleus size to be able to reproduce the measured profiles. Conclusion The method proposed is capable of reproducing the reflectivity changes measured on OCT scans of the ONL of DME eyes and to justify these at the subcellular level.


Monte Carlo simulation of diabetic macular edema changes on optical coherence tomography data

June 2014

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69 Reads

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9 Citations

Optical coherence tomography (OCT) scans were acquired from healthy controls and patients with diabetic macular edema (DME), a common complication of diabetes characterized by increased retinal thickness due to fluid accumulation. The collected OCT data was divided into three distinct groups: healthy subjects, DME patients with significantly increased outer nuclear layer (ONL) thickness and DME patients without visible changes in the ONL. For each group, the ONL was segmented and processed, yielding a representative A-scan. Using reference values for the physical and optical characteristics of the healthy human retina, we used a Monte Carlo method with a model for the ONL to simulate an A-scan for each group and compare it to the real OCT data. This allowed to identify which alterations in the cellular characteristics are responsible for the changes observed in the OCT scans of the diseased groups.



Figure 1: Schematic of the optical coherence tomography apparatus 
Figure 2: Triangulated mesh used for the simulation in the disperse 
Figure 3: Colormap representation of the scattered field E x s on Ω for t = 0 . 9 (left) and for t = 1 . 2 (right). 1064 elements (i.e. triangles), ∆ t = 2 . 45 × 10 − 5 
Figure 4: Triangulated mesh used for the simulation in the com- 
Figure 5: Colormap representation of the scattered field E x s on Ω 
From Optical Coherence Tomography to Maxwell’s Equations

February 2013

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290 Reads

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10 Citations

Optical Coherence Tomography, OCT, is a relatively recent imaging technique that allows high resolution imaging of the retina. It relies in certain optical characteristics of light to provide information of the eye fundus, facilitating the diagnosis of certain eye pathologies. Our goal is to build a mathematical model that describes the electromagnetic wave's propagation through the eye's structures, using Maxwell's equations, in order to create a virtual OCT scan. With this virtual exam, we will be able to test different characteristics of the medium and assess their effect on the final image.


Citations (4)


... OCT provides the absorption and scattering properties of the tissues and thus inherently conveys pertinent information on the structure of the retina. In addition to the basic information on the thickness of the retina, previous studies conducted by our research group demonstrate that information gathered by the OCT allows to classify eyes, automatically, into the Parkinson, Diabetic Retinopathy and Multiple Sclerosis groups [7,8]. These works paved the way for the work herewith reported. ...

Reference:

[Regular Paper] Texture Biomarkers of Alzheimer's Disease and Disease Progression in the Mouse Retina
Optical coherence tomography in LRRK2-associated Parkinson Disease (P2.147)
  • Citing Article
  • April 2015

Neurology

... In the second type of edema, hard exudates can be structured because of the lipid contents of the leakage can agglomerate into an irregular shape. Finally, each eye of a DME patient can present regions with different characteristics, such as increased ONL thickness, cysts, and even areas without any visible changes [60]. ...

Monte Carlo simulation of diabetic macular edema changes on optical coherence tomography data
  • Citing Conference Paper
  • June 2014

... Maxwell's equations, being the general foundation of light wave propagation tasks, are rarely used in concrete situations because of difficulties of analytical or numerical analysis. A numerical analysis of wave equations, derived from Maxwell's equations, has high computational costs (see, for example, [50][51][52][53]). When the focal length is much larger than the wavelength, the Debye and the Richards-Wolf approximations can be used for the simulation of a laser beam focusing [54,55]. ...

From Optical Coherence Tomography to Maxwell’s Equations

... Most are based on single-scattering theory [10], which cannot fully model the complex structure of the retina. This can be achieved by solving Maxwell's equations [11]. The Mie solution to Maxwell's equations is one of the most popular methods to model tissue scattering at the cellular level [12]. ...

Numerical Solution of time-dependent Maxwell’s Equations for modelling scattered electromagnetic wave’s propagation
  • Citing Conference Paper
  • January 2013