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A Nomogram Based on a Multiparametric Ultrasound Radiomics Model for Discrimination Between Malignant and Benign Prostate Lesions

Frontiers
Frontiers in Oncology
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Objectives To evaluate the potential of a clinical-based model, a multiparametric ultrasound-based radiomics model, and a clinical-radiomics combined model for predicting prostate cancer (PCa). Methods A total of 112 patients with prostate lesions were included in this retrospective study. Among them, 58 patients had no prostate cancer detected by biopsy and 54 patients had prostate cancer. Clinical risk factors related to PCa (age, prostate volume, serum PSA, etc.) were collected in all patients. Prior to surgery, patients received transrectal ultrasound (TRUS), shear-wave elastography (SWE) and TRUS-guided prostate biopsy. We used the five-fold cross-validation method to verify the results of training and validation sets of different models. The images were manually delineated and registered. All modes of ultrasound radiomics were retrieved. Machine learning used the pathology of “12+X” biopsy as a reference to draw the benign and malignant regions of interest (ROI) through the application of LASSO regression. Three models were developed to predict the PCa: a clinical model, a multiparametric ultrasound-based radiomics model and a clinical-radiomics combined model. The diagnostic performance and clinical net benefit of each model were compared by receiver operating characteristic curve (ROC) analysis and decision curve. Results The multiparametric ultrasound radiomics reached area under the curve (AUC) of 0.85 for predicting PCa, meanwhile, AUC of B-mode radiomics and SWE radiomics were 0.74 and 0.80, respectively. Additionally, the clinical-radiomics combined model (AUC: 0.90) achieved greater predictive efficacy than the radiomics model (AUC: 0.85) and clinical model (AUC: 0.84). The decision curve analysis also showed that the combined model had higher net benefits in a wide range of high risk threshold than either the radiomics model or the clinical model. Conclusions Clinical-radiomics combined model can improve the accuracy of PCa predictions both in terms of diagnostic performance and clinical net benefit, compared with evaluating only clinical risk factors or radiomics score associated with PCa.
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A Nomogram Based on a
Multiparametric Ultrasound
Radiomics Model for Discrimination
Between Malignant and Benign
Prostate Lesions
Lei Liang
1
, Xin Zhi
1
, Ya Sun
1
, Huarong Li
1
, Jiajun Wang
1
, Jingxu Xu
2
and Jun Guo
1
*
1
Department of Ultrasound, Aerospace Center Hospital, Beijing, China,
2
Department of Research Collaboration, R&D
Center, Beijing Deepwise & League of PHD Technology Co., Ltd, Beijing, China
Objectives: To evaluate the potential of a clinical-based model, a multiparametric
ultrasound-based radiomics model, and a clinical-radiomics combined model for
predicting prostate cancer (PCa).
Methods: A total of 112 patients with prostate lesions were included in this retrospective
study. Among them, 58 patients had no prostate cancer detected by biopsy and 54
patients had prostate cancer. Clinical risk factors related to PCa (age, prostate volume,
serum PSA, etc.) were collected in all patients. Prior to surgery, patients received
transrectal ultrasound (TRUS), shear-wave elastography (SWE) and TRUS-guided
prostate biopsy. We used the ve-fold cross-validation method to verify the results of
training and validation sets of different models. The images were manually delineated and
registered. All modes of ultrasound radiomics were retrieved. Machine learning used the
pathology of 12+Xbiopsy as a reference to draw the benign and malignant regions of
interest (ROI) through the application of LASSO regression. Three models were developed
to predict the PCa: a clinical model, a multiparametric ultrasound-based radiomics model
and a clinical-radiomics combined model. The diagnostic performance and clinical net
benet of each model were compared by receiver operating characteristic curve (ROC)
analysis and decision curve.
Results: The multiparametric ultrasound radiomics reached area under the curve (AUC)
of 0.85 for predicting PCa, meanwhile, AUC of B-mode radiomics and SWE radiomics
were 0.74 and 0.80, respectively. Additionally, the clinical-radiomics combined model
(AUC: 0.90) achieved greater predictive efcacy than the radiomics model (AUC: 0.85) and
clinical model (AUC: 0.84). The decision curve analysis also showed that the combined
Frontiers in Oncology | www.frontiersin.org March 2021 | Volume 11 | Article 6107851
Edited by:
Hong Huang,
Chongqing University, China
Reviewed by:
Cheng Wei,
University of Dundee, United Kingdom
Ayman Moussa,
Cleveland Clinic Abu Dhabi,
United Arab Emirates
*Correspondence:
Jun Guo
guojun0316@sohu.com
These authors have contributed
equally to this work
Specialty section:
This article was submitted to
Cancer Imaging and
Image-directed Interventions,
a section of the journal
Frontiers in Oncology
Received: 27 September 2020
Accepted: 25 January 2021
Published: 02 March 2021
Citation:
Liang L, Zhi X, Sun Y, Li H, Wang J,
Xu J and Guo J (2021) A Nomogram
Based on a Multiparametric
Ultrasound Radiomics Model for
Discrimination Between Malignant and
Benign Prostate Lesions.
Front. Oncol. 11:610785.
doi: 10.3389/fonc.2021.610785
ORIGINAL RESEARCH
published: 02 March 2021
doi: 10.3389/fonc.2021.610785
model had higher net benets in a wide range of high risk threshold than either the
radiomics model or the clinical model.
Conclusions: Clinical-radiomics combined model can improve the accuracy of PCa
predictions both in terms of diagnostic performance and clinical net benet, compared
with evaluating only clinical risk factors or radiomics score associated with PCa.
Keywords: radiomics, multiparametric ultrasound, clinical risk factors, machine learning, prostate cancer,
nomogram model
INTRODUCTION
The incidence rate of prostate cancer (PCa) is rapidly increasing
in China (1) and is the second most common cancer and the fth
leading cancer-related cause of death among males (2). As such,
it has been one of the main health problems affecting many
families. PCa screening has been studied in many randomized
controlled trials, and different caveats have been proposed.
Unfortunately, after detecting the serum level of prostate
specic antigen (PSA) and/or performing a digital rectal
examination, a 10- to 12-core systematic biopsy (3) is required
by the standard diagnostic method. In addition to the
complications related to this procedure (4), it has been
reported that underestimation and overtreatment are high
(5).Therefore, in order to avoid unnecessary trauma, the
accuracy of non-invasive diagnostic methods before prostate
biopsy must be improved.
In general, patients with PCa are divided into the low,
medium, or high risk groups based on the level of prostate
specic antigen (PSA), pathological assessment/Gleason score
(GS), and clinical stage (i.e. T stage) (6). Although free prostate-
specic antigen (fPSA), total prostate-specic antigen (tPSA),
and the ratio of free PSA to total PSA (f/tPSA) are frequently
applied to clinical PCa detection and grading indicators, (79),
which indicators are more appropriate for the diagnosis and
classication of PCa remains a controversy, and no agreement
has been reached (10,11). Based on the European Urology
Association treatment guidelines for PCa in 2017, it is
recommended that patients suffering from GS <7 PCa undergo
active surveillance and wait for observation. On the contrary,
because there is an increased risk of exacerbation and shorter rate
of survival among patients with GS 7 PCa, it is necessary to take
timely measures (3). Therefore, accurate risk assessment is
important to select the best treatment option for these patients.
Multi-parameter magnetic resonance imaging (mpMRI) has
become an important tool for PCa risk assessment. In the
European Urological Associations 2019 guidelines, the
application of pre-biopsy mpMRI is recommended in their
diagnostic approach. Nevertheless, in addition to several
intrinsic limitations of MRI, such as high cost, limited
availability, and unrealistic clinical application, the learning
curve of prostate imaging report and data system (PI-RADS),
is steep and there is a high risk of inconsistency between
operators (12).
Ultrasound is another cost-efcient, widely available, and
practical potential candidate for PCa imaging. Although some
ultrasound modalities, such as shear-wave elastography (SWE),
have shown encouraging results, targeted biopsies using B-mode
ultrasound remain inferior to systematic biopsies (13). A
multiparametric method has the principle of imaging well-
known multifocal and heterogeneous diseases such as PCa (14)
which is applicable to MRI and ultrasound by extracting
information from tissue texture, elasticity, or perfusion and
other complementary biomarkers. However, until now, a
multiparametric ultrasound method has rarely been studied
(15). Furthermore, there is growing interest in the use of
quantitative features called radiomics. According to the
denition, radiomics acts as the high-throughput extraction of
many medical imaging characteristics and their conversion into
mined, high-dimensional data whose quantitative analysis offers
unprecedented opportunities to improve clinical decision-
making (16,17).
In previous studies, the analysis of radiomics features focused
on evaluating and classifying PCa lesions (18,19) using mpMRI.
However, transrectal B-mode ultrasound is also a common
imaging method to examine the prostate. Additionally, it is
considered that tissue stiffness acts as an important indicator
of malignant tumor for SWE, and recent studies have shown that
it can also be used to detect PCa (20). In this study, our main
purpose is to verify the feasibility of multiparametric ultrasound
radiomics in discriminating between malignant and benign
prostate lesions. Nevertheless, no studies exist that combine the
features of ultrasound radiomics with clinical factors for
risk assessment.
In consequence, we constructed models according to the
principle of multiparametric ultrasound radiomics in
combination with clinical factors to predict PCa, and
compared whether the combination of these methods helps to
improve diagnostic efciency.
METHODS
Patients Enrolled in This Study
The institutional Ethics Committee of our hospital approved this
retrospective research, and an informed consent was been signed
by all participants. A total of 128 patients were included in our
hospital from July 2019 to November 2020. Inclusion criteria
were as follows: (1) patients have clinical symptoms (frequency
and urgency of urination, urination or dysuria pains) or
enhanced PSA level; (2) patients have completed transrectal B-
Liang et al. Nomogram Model for Discrimination Prostate Lesions
Frontiers in Oncology | www.frontiersin.org March 2021 | Volume 11 | Article 6107852
mode ultrasound and SWE examinations before receiving
ultrasound-guided biopsy; (3) pathological results were
conrmed through biopsy, and (4) patients with initial biopsy.
Exclusion criteria were shown below: (1) it is difcult to describe
pathological biopsy by transrectal ultrasound (TRUS) (according
to pathological results, TRUS images fail to show lesion location)
(n = 6); (2) surgery, radiotherapy or endocrine therapy prior to
TRUS examination (n = 4); (3) PSA was too high to calculate
(n = 3), or (4) incomplete TRUS data (lack of SWE data) (n = 3).
Ultimately, the study population consisted of 112 patients
including 58 PCa patients and 54 patients who do not show
any histological evidence of cancer. Figure 1 shows the details of
patient selection.
Clinical Data
Age, prostate volume (PV), serum PSA (including tPSA and
fPSA), f/t PSA, Prostate-specic antigen density (PSAD), DRE
result (normal vs abnormal), prostate biopsy pathology and other
clinical information were collected from the patients selected. On
the images of TRUS, PV was calculated as anteroposterior
diameter × vertical diameter × transverse diameter× 0.52.
PSAD was calculated as total PSA/PV.
Ultrasound Image Data Acquisition
Each patient underwent B-mode ultrasound and SWE recording
of the apical, middle, and bottom of the prostate. The
examination was performed using an Aixplorer®Ultrasound
scanner (SuperSonic Imagine, Aix en Provence, France)
equipped with a SE 12-3 transrectal probe.
After standard PV measurement and assessment of the
prostate capsule and seminal vesicles, B-mode ultrasound was
applied to slowly capture the transverse and sagittal scans of the
whole prostate. Abnormal echo patterns (calcications, cysts,
and hypoechoic lesions) were recorded, and the pictures of the
apical, middle, and bottom transverse plane of interest were
determined and stored by the operator visually based on the
anatomical shape of the prostate. If the prostate areas were
considered to more suspicious than the anatomically selected
FIGURE 1 | Patient selection ow chart.
Liang et al. Nomogram Model for Discrimination Prostate Lesions
Frontiers in Oncology | www.frontiersin.org March 2021 | Volume 11 | Article 6107853
imaging plane, these areas would be brought and stored to the
eld of view.
If necessary, the settings specictoSWE(maximum
penetration and suitable elasticity level) were reviewed and
optimized before SWE imaging. The SWE box would be used
to scan each pre-dened transverse plane in one side (left/right
only) and both sides (whole plane; maximum prostate plane
coverage). During each scanning, a stable signal is ensured in
case of 5-s stay of the sensor remained in a stable position. After
storing the pictures and cine loops, elastic values could be
determined later. If prostate areas on the SWE outside the
predetermined imaging plane were considered more
suspicious, then these areas would also be taken into account.
Figure 2 shows an example of SWE.
We conducted a retrospective review of the image data and
selected ultrasound image data in digital imaging and
communications in medicine (DICOM) format to clearly show
the maximum cross section of each lesion. The above image
information and format were retained for later image segmentation.
Biopsy Procedure and Pathology
All patients ceased taking anti-coagulants for one week before
biopsy and took antibiotics for three days after biopsy. No local
anesthetic was applied during the biopsy. The biopsies were
performed by two sonographers with more than ve years of
biopsy experience. An Aixplorer®Ultrasound scanner
(SuperSonic Imagine, Aix en Provence, France) equipped with
a SE 12-3 transrectal probe (end-re) was applied. An 18-G
biopsy gun with the length of 18 mm and a penetration depth of
22 mm was applied to perform the procedure (Bard Biopsy
Systems, Tempe, Arizona, USA).
All patients underwent the 12+Xbiopsy, which is a targeted
biopsy for suspicious areas (combined with B-mode and SWE)
on the basis of 12-core transrectal systematic biopsy. Systematic
biopsy means that, according to the plan, the needle is inserted
into 12 regions of the prostate (medial and lateral apex, medial
and lateral mid prostate, and medial and lateral base in both
lobes), with one needle in each region (21). In addition to the
above-mentioned 12 needles, one to two needles were punctured
in the suspicious area.
Prostate Segmentation
We imported the images into the ITK-SNAP software (version
3.8.0) to manually draw the tumor boundary and determine the
tumor region of interest (ROI). To ensure the consistency of the
ROIs in the B-mode ultrasound and SWE images, the same criteria
were applied to rigorously depict all the ROIs, and the same expert
visually veried them. The following content shows the location
and size of the lesion: (1) detailed records of prostate biopsy
(puncture site and depth) and pathological ndings were used to
determine the location and nature of the lesion; (2) the description
of pathology location matches the related lesion on the TRUS
image, and (3) due to the uncertainty of tumor boundary in SWE
images, ROIs of B-mode ultrasound images were applied to the
corresponding SWE images. There is a notable aspect of ROI
drawing: for multifocal PCa, biopsy pathology was applied to
select and conrm the ROI of the lesion with the highest GS value;
in the case of the same GSs, the ROI of the lesion with the largest
diameter was used. Figure 3 shows an example of lesion
segmentation for enrolled patients. At the same time, special
personnel were responsible for checking the accuracy of the
segmentation and relevant pathological results.
The repeatability of feature extraction was assessed on the
basis of intra-observer and inter-observer repeatability of lesion
segmentation. In order to assess the repeatability of characteristic
extraction between intra-observer and inter-observer, 40 patients
were randomly selected and the ROI was delineated by two
radiologists. Both radiologists had more than three years of
experience in prostate ultrasound diagnosis.
Radiomics Feature Extraction
This study used the Dr. Wise Multimodal Research Platform
(https://keyan.deepwise.com) (Beijing Deepwise & League of
PHD Technology Co., Ltd, 193 Beijing, China) for feature
extraction. 1,218 features were extracted from ROI of B-mode
and SWE; the extracted features were divided into seven
categories: First Order Features, Shape Based, Gray-scale Co-
occurrence Matrix(GLCM) Features, Gray-level Size Zone
Matrix(GLSZM) Features, Gray-level Run Length Matrix
(GLRLM) Features, Gray-Level Distance-Zone Matrix (GLDM)
and Neighboring Gray Level Dependence matrix.
FIGURE 2 | A 67-year-old patient had no obvious abnormal lesions in B-mode ultrasound (A), SWE (B) showed that the local tissue became stiff, and the biopsy
result was Gleason = 3 + 4. ROI was delineated under the guidance of the abnormal area of SWE.
Liang et al. Nomogram Model for Discrimination Prostate Lesions
Frontiers in Oncology | www.frontiersin.org March 2021 | Volume 11 | Article 6107854
Model Construction
Prostate lesions were identied by clinical elements and
radiomics characteristics. We used the ve-fold cross-
validation method to verify the results of training sets and
validation sets of different models. With regard to clinical
elements, logistic regression models were established by
univariate and multivariate logistic analyses to identify the
relationship between clinical factors and prostate lesions. In
terms of the multiparametric ultrasound-based radiomics
model, we attempted to use six kinds of feature-screening
methods including F-Test, Pearson Correlation Coefcient,
Mutual Information, L1-based, Tree-based models, and
Recursive Feature Elimination. Only one of the above methods
was used for feature screening each time to build the model.
Finally, the L1-based model was selected because of its optimal
diagnostic performance. Through analyzing the logistic
regression of the selected characteristics weighted by their
coefcients, a formula called RAD-SCORE was generated. An
integrated clinical-radiomics combined model with the weight of
radiomics characteristics and clinical risk factors was established
by using multivariate logistic regression and was presented in the
form of nomogram.
Statistical Analysis
When establishing the clinical model, the clinical factors were
selected by applying univariate logistic regression, and the
clinical model was established by introducing the clinical
factors with p<0.05 into multivariate logistic regression. In
logistic regression, the forward stepwise selection method was
adopted. Finally, the clinical model was set up. The area under
curve (AUC) with 95% condence intervals (95% CIs) was used
to quantify the performance of each model. Whether the AUC
values of the three models were signicantly different was
determined by employing the DeLong test. The nomogram of
the clinical-radiomics model was constructed to improve
decision making. Decision curve analysis was conducted to
determine the clinical usefulness of the clinical, radiomics and
clinical-radiomics combined model. R software (version 4.0.2)
and SPSS (version 23.0) were employed to perform analysis.
Theentireworkow of this analysis was presented in
Figure 4.
RESULTS
Patient Characteristics
Among the 112 patients, 58 (51.7%) presented with benign
lesions, and 54 (48.2%) were diagnosed with PCa. The GS
results of all patients were as follows: 3 + 3 = 6 (10 cases); 3 +
4 = 7(nine cases); 4 + 3 = 7 (10 cases); >4 + 3 (25 cases). Table 1
shows the features of all patients.
Clinical Model
With regard to clinical factors, tPSA, fPSA, and PSAD were
important factors for the prediction of PCa based on the
univariate logistic regression analysis. According to multivariate
logistic analysis, age and PSAD were important (p<0.05)as
independent predictors. The outcomes of the univariate and
multivariate logistic regression analysis were presented in Table 2.
At the end, a logistic regression classier was set up according to the
clinical characteristics selected. The AUC of the training set was 0.88
(95% CI: 0.820.95), accuracy rate was 0.81, sensitivity was 0.75, and
specicity was 0.87. The AUC of the validation set was 0.84 (95%
CI: 0.760.91), accuracy rate was 0.76, sensitivity was 0.67 and
specicity was 0.85.
Radiomics Model
Intra-observer and inter-observer consistency for characteristic
extraction were assessed by using intra-class and inter-class
correlation coefcients (ICCs). Feature extraction of intra-
observer and inter-observer showed good reproducibility, with
intra-observer ICCs ranging from 0.78 to 0.85 and the inter-
observer ICCs ranging from 0.75 to 0.88.
In the training set, after the LASSO algorithm was applied,
1,218 B-mode features were reduced to 20 risk predictors, and
corresponding steps were also completed for the SWE data set.
Then, after the lasso regression, the total 2,436 features of the two
modes were reduced to 20 related features, and the
Multiparametric RAD-SCORE was obtained. The sum of the
FIGURE 3 | TRUS B-mode ultrasound imaging (A) and SWE imaging (B) from the same position of 74-year-old PCa patient (fPSA, 1.28 ng/ml; tPSA, 7.855 ng/ml;
biopsy GS,4 + 3 = 7). ROI (red solid line) was outlined in the B-mode ultrasound and SWE.
Liang et al. Nomogram Model for Discrimination Prostate Lesions
Frontiers in Oncology | www.frontiersin.org March 2021 | Volume 11 | Article 6107855
AB D EC
FIGURE 4 | The workow of this study. (A) Regions of interest were segmented from B-mode ultrasound and SWE. (B) The quantitative imaging texture features were extracted and selected to construct the
radiomics model. (C) Clinical risk factors were used to establish the clinical model. (D) At the same time, the radiomics and clinical factors were added to construct the combined clinical-radiomics model. (E) ROC
curve analysis and DCA were used to evaluate the performance of the model.
TABLE 1 | Characteristics of all patients (n = 112).
Characteristics Cohort of benign
patients
Cohort of PCa
patients
Number of patients, n 58 54
Age, years (median; IQR) 72.00(66.0075.00) 78.00 (71.7583.00)
PV, ml (median; IQR) 52.70(40.7083.12) 43.70(34.0858.83)
tPSA, ng/ml(median; IQR) 6.40 (4.6210.58) 12.38 (8.8562.00)
fPSA, ng/ml(median; IQR) 1.19(0.721.70) 1.92(1.137.63)
f/tPSA, % (median; IQR) 18.31(12.6225.16) 16.52(11.2020.85)
PSAD, ng/ml/ml (median;
IQR)
0.12(0.070.20) 0.32(0.171.25)
Abnormal DRE, n (%) 32(55.2) 30(55.5)
TABLE 2 | Univariate and multivariate logistic analysis results of clinical factors.
Clinical
factors
Univariate logistic analysis
results
Multivariate logistic analysis
results
OR (95% CI) p
value
OR (95% CI) p
value
Age 1.071(1.0191.126) 0.007 1.123(1.0491.202) 0.001
fPSA 1.561(1.1082.200) 0.011 0.907
tPSA 1.129(1.0401.226) 0.004 0.563
f/t PSA 0.978(0.9351.023) 0.339
PV 0.994(0.9831.006) 0.321
PSAD 227.470 (7.374
7017.363)
0.002 550.945 (13.503
22479.425)
0.001
DRE results 1.141(0.3483.734) 0.828
FIGURE 5 | ROC of B-mode ultrasound, SWE, and Multiparametric.
Liang et al. Nomogram Model for Discrimination Prostate Lesions
Frontiers in Oncology | www.frontiersin.org March 2021 | Volume 11 | Article 6107856
weighted features of B-mode RAD-SCORE, SWE RAD-SCORE
and Multiparametric RAD-SCORE are shown in Appendix 1.
The AUC values of the training set of the B-mode RAD-
SCORE, SWE RAD-SCORE, and multiparametric RAD-SCORE
were 0.97 (95% CI: 0.941.00), 0.97(95% CI: 0.941.00), and 1.00
(95% CI: 0.9491.00)), respectively. And the AUC values of the
validation set were 0.74 (95% CI: 0.650.84), 0.80(95% CI: 0.72
0.88) and 0.85 (95% CI: 0.770.92), respectively. The ROC curves
of the three models were shown in Figure 5.
Clinical-Radiomics Combined Model
The nomogram of the clinical-radiomics combined model
including age, PSAD, and RAD-SCORE is shown in Figure 6.
The clinical-radiomics combined model displayed excellent
predictive capacity with AUC of 0.91(95% CI: 0.860.97) in the
training group and 0.89 (95% CI: 0.820.96) in the validation
group. Despite showing the same diagnostic efcacy as the
radiomics model, the clinical-radiomics combined model was
better than the clinical model in diagnostic efcacy (p< 0.05).
The AUC, accuracy, sensitivity, and specicity of the three
models are compared and presented in Table 3. The ROC
curves of the three models are compared in Figure 7.
Decision Curve
The decision curves of the clinical model, the radiomics model, and
the clinical-radiomics combined model are shown in Figure 8.
According to the decision curve, the clinical-radiomics combined
model was more benecial in a wide range of high risk threshold
than the clinical and radiomics models alone in predicting PCa.
DISCUSSION
In this study, the development of a multiparametric radiomics
classier was reported for the classication of prostate lesions on
basis of co-registration of B-mode ultrasound and SWE. The
radiomics model was established by extracting quantitative
imaging characteristics and effectively choosing these
characteristics. Subsequently, a clinical-radiomics combined
model was developed by combining the RAD-SCORE with
clinical factors. According to the results, clinical-radiomics
combined model can improve the accuracy of PCa predictions
both in terms of diagnostic performance and clinical net benet,
FIGURE 6 | Nomogram of the combined model for predicting PCa.
TABLE 3 | AUC results of the clinical, radiomics, and clinical-radiomics combined models for predicting PCa.
Clinical model Radiomics model Clinical-radiomics combined model
Training set Validation set Training set Validation set Training set Validation set
AUC
(95% CI)
0.88 (0.820.95) 0.84 (0.760.91) 1.00 (0.991.00) 0.85 (0.770.92) 0.92 (0.860.97) 0.90 (0.840.96)
Accuracy 0.81 0.76 0.99 0.78 0.84 0.81
Sensitivity 0.75 0.67 1.00 0.77 0.79 0.75
Specicity 0.87 0.85 0.98 0.80 0.89 0.87
FIGURE 7 | Comparison of ROC curves for differentiation of the three
models for predicting PCa.
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Frontiers in Oncology | www.frontiersin.org March 2021 | Volume 11 | Article 6107857
compared with evaluating only clinical risk factors or radiomics
score associated with PCa.
Clinical Factors Associated With PCa
In previous studies, prostate related clinical factors were identied
by researchers to assist with diagnosing PCa and assessing its
invasiveness. However, agreement has not been reached. Niu et al.
showed that age, PI-RADS version 2 score, and adjusted PSAD
were independent predictors of high-grade PCa (HGPCa), with an
AUC of 0.83 (22). Fang et al. predicted the presence of PCa and
HGPCa by applying clinical factors (age, PSA, fPSA, PV, and
TRUS) with or without MRI outcomes. The AUC values for the
prediction of PCa with or without MRI were 0.875 and 0.841,
respectively, while those for the prediction of HGPCa were 0.872
and 0.850, respectively (23). In a study by Li et al., patients with
benign lesions and GS = 6 were grouped into clinically
insignicant PCa. After univariate and multivariate logistic
analysis, the results showed that age, tPSA, fPSA and clinical
factors were important factors for predicting signicantly
important PCa, with an AUC value of 0.842 (24). Our study
also showed that age and PSAD were important predictors of PCa.
Considering the total level of PSA and prostate volume, PSAD
may have more individualized signicance than serum PSA level,
as previously reported in the literature (25). However, our results
were not completely consistent with the previous studies
mentioned above. This may be due to the different clinical
factors selected in each study and inconsistent case grouping.
Therefore, a more simple and accurate method should be
developed for the grouping and scoring of prostate cancer patients.
Some Radiomics Features That Can
Discriminate Prostate Lesions
According to the previous studies, hypoechoic lesions have a
relatively low ability to predict PCa (26,27). This may be due to
the subjective choice of hypoechoic lesions by the operator,
thereby making its reproducibility and representativeness
problematic (26,28). Although hypoechoic lesions of B-mode
ultrasound cannot be used as a predictor of PCa, some studies
have shown that PCa with hypoechoic lesions may represent high-
grade Gleason. According to the report by Nakano Junqueira et al.,
patients who have received prostatectomy with hypoechoic lesions
experienced greatly worse prognosis than those without
hypoechoic lesions, despite great differences in Gleason score,
PSA, and percentage of positive cores (29). However, previous
studies have limitations in the repeatability and representativeness
of the quantitative expression of outcomes. The signicance of our
study is that radiomics can provide a numerical value by
quantitative analysis of gray level. Our results showed that the
Mean@b (i.e. The average gray level intensity within the ROI) of
PCa was lower than that of benign lesions, and the Mean@b can be
used as a predictor of PCa. Moreover, the average gray level of
different nodules can be obtained by using radiomics, which can
provide an objective index for the prediction of PCa.
Variations in cellular composition, uid content, collagen level,
and bromuscular stroma in different types of prostate lesions
may be reected by quantitative analysis through radiomics. Our
study showed that patients with benign lesions displayed lower
values in Correlation, which is a value between 0 (uncorrelated)
and 1 (perfectly correlated) indicating the linear dependence of
gray level values on their respective voxels, with high relative
weight. In another parameter of homogeneity, benign nodules
displayed higher levels of Gray Level Non-Uniformity Normalized
(GLNN), that is the changes of gray-level intensity values in the
image, with a lower value reecting a larger similarity in intensity
values, than that of PCa. The above results indicated that the
consistency in benign prostatic lesions was lower than that in PCa.
The most common benign nodular lesion in the prostate is benign
prostatic hyperplasia (BPH), which is usually accompanied by an
inammatory reaction. Inammatory cells and pro-inammatory
cytokines can be detected in the histopathology of the resected
BPH specimens (30). In addition, studies have conrmed that
BPH is often characterized by the increased number of cells of
different components, not only in the number of gland cells, but
also in the number of smooth muscle cells, or may even consist
entirely of stromal nodules (31). However, the pathological
changes of PCa are mostly because of the increase of the
number of cancer cells and the changes of extracellular space
(24). Therefore, we speculated that the heterogeneity of cellular
components may be the reason for the lower consistency of
ultrasound radiomics in benign prostatic lesions than in PCa.
FIGURE 8 | Decision curves of the clinical, radiomics, and clinical-radiomics combined models for predicting PCa.
Liang et al. Nomogram Model for Discrimination Prostate Lesions
Frontiers in Oncology | www.frontiersin.org March 2021 | Volume 11 | Article 6107858
Even before morphological changes are detected by MRI and
ultrasound examination, the stiffness of prostate tissue changes
early with the effect of desmoplastic reaction or cancer cells
inltrating into the interstitial tissues, leading to PCa tissue
feeling harder than normal tissue (3234). Therefore, current
guidelines suggest that SWE can be used as an auxiliary means
for TRUS to detect PCa (35). Considering the above factors, we
incorporated SWE into the radiomics model in this study. As a
rule, in SWE images, the redder the color, the stiffer the tissue,
and in the radiomics standards, the redder the color, the higher
the gray level. Our study showed that the value of Mean@SWE in
PCa was higher, indicating that the nodules of PCa are stiffer,
which is consistent with the results of previous studies. Our
results also showed that the multiparametric radiomics model
combined with B-mode ultrasound and SWE had better
diagnostic performance than the single-parametric model, and
the AUC can reach 0.85.
Some Advantages of Our Study: Widely
Used Radiomics Features and Nomograms
Recently, some studies have compared or combined radiomics,
including mpMRI, CT, and prostate specic membrane antigen-
positron emission computed tomography (PSMA-PET), with
common approaches to assess the diagnostic value of prostate
lesions (25,36,37). The research focused on the use of mpMRI
combined with PI-RADS, which can accurately characterize the
prostate index lesions derived from mpMRI by using quantitative
image data (38). Another important examination is ultrasound,
which not only has the advantage of simplicity, but also plays an
indispensable role in prostate biopsy. However, ultrasound-based
radiomics studies of prostate lesions are rare. Only Wildeboer et al.
reported that the multiparametric classier combined B-mode,
SWE and contrast-enhanced ultrasound (CEUS) radiomics can
reach AUC of 0.75, PCa of 0.90 and great PCa, respectively (39).
However,this study used unique radiomics characteristicsthat were
inconsistent with the characteristics adopted by moststudies. In our
study, a more widely used Pyradiomic approach (40) was used to
establish a combined model of prostate cancer diagnosis by
combining radiomics with clinical factors associated with
the diagnosis of prostate cancer. It can be seen that adding RAD-
SCORE to the clinical model can improve the diagnostic efciency
and clinical net benet in PCa diagnosis. As such, the model
based on radiomics characteristics is obviously valuable in
diagnosing PCa.
Lately, the eld of clinical medicine has widely applied the
nomogram gure forecast model. A lot of researches associated
with this model have been published in the clinical journals
with high impacts (41,42). The nomogram gure forecast
model represents a variety of disease risk elements and predicts
the prognosis of patients by using risk score, which is more
distinct, simple, and easy to understand. Meanwhile, after
being used in clinical work effectively, it is conducive to
physicianpatient communication and an improved
physicianpatient relationship. In this study, the developed
nomogram of the clinical-radiomics combined model offered
an intuitive and convenient approach for physicians to
diagnosePCa,andwillbeanewmethodofauxiliary
diagnosis in clinical work.
Limitations
Although the proposed method was used to improve the
performance of discrimination between malignant and benign
prostate lesions, several malignant ROIs were missed, and several
benign ROIs were wrongly categorized as malignant. In the
future, the nature of false readings (39) may be claried further
by immunohistochemical techniques. It has been suggested that
prostatitis or prostatic hyperplasia, which sometimes occurs
simultaneously with prostate cancer, is also considered to
promote angiogenesis and change the stiffness of prostate
tissue, which may attribute to the false characterization (43,
44). Future analysis including CEUS parameters may help us nd
more radiomics features of the multiparameter model.
Despite the hopeful outcomes, there were several limitations in
this research. Firstly, our results showed that there was no
statistical difference in RAD-SCORE among patients with
different Gleason scores, which may be due to the small number
of enrolled patients. Moreover, this study was a retrospective study
conducted at a single institution. Although cross-validation was
used to test the model, better evidence for clinical application
needs to be obtained by multi-center validation with a larger
sample size. Secondly, the Peripheral zone (PZ) and Transition
zone (TZ) of the prostate were not separated in this research due
to highly malignant diseases in both regions. However, there may
be differences between the two regions, including in B-mode
ultrasound and SWE (35). Therefore, further investigation is
required to expand the size of the research object and
distinguish PZ from TZ of the prostate in different ways.
CONCLUSIONS
In our study, we developed a radiomics model to discriminate
between benign and malignant lesions of the prostate with high
diagnostic power and clinical net benet. Moreover, we proved
the feasibility of a multiparametric ultrasound classier to
improve the PCa localization. Using the nomogram to
comprehensively consider the radiomics features and clinical
factors can provide radiologists with a quantitative and intuitive
method to predict PCa with more condence. Our goal is to
further expand the data set so that the performance of the model
can be consolidated.
DATA AVAILABILITY STATEMENT
The raw data supporting the conclusions of this article will be
made available by the authors, without undue reservation.
ETHICS STATEMENT
The studies involving human participants were reviewed and
approved by the Ethics Committee of Aerospace Center
Liang et al. Nomogram Model for Discrimination Prostate Lesions
Frontiers in Oncology | www.frontiersin.org March 2021 | Volume 11 | Article 6107859
Hospital. The patients/participants provided their written
informed consent to participate in this study.
AUTHOR CONTRIBUTIONS
LL and XZ contributed equally to this work. They jointly
completed the study design, data collection, statistical analysis,
and article writing. YS and HL mainly completed the data
collection work. JX and JW completed the Radiomics analysis
and chart making. All authors contributed to the article and
approved the submitted version.
FUNDING
This study is supported by Hospital level project of Aerospace
Center Hospital (YN202105) and Scientic research and
cultivation plan of health development in Haidian District
(HP2021-32-50702).
ACKNOWLEDGMENTS
The authors thank AiMi Academic Services (www.aimieditor.
com) for English language editing and review services.
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Conict of Interest: Author JX was employed by Beijing Deepwise & League of
PHD Technology Co., Ltd.
The remaining authors declare that the research was conducted in the absence of
any commercial or nancial relationships that could be construed as a potential
conict of interest.
Copyright © 2021 Liang, Zhi, Sun, Li, Wang, Xu and Guo. This is an open-access
article distributed under the terms of the Creative Commons Attribution License
(CC BY). The use,distribution or reproduction in other forumsis permitted, provided
the original author(s) and the copyright owner(s) are credited and that the original
publicationin this journal is cited, in accordance with accepted academic practice. No
use, distribution or reproduction is permitted which does not comply with these terms.
Liang et al. Nomogram Model for Discrimination Prostate Lesions
Frontiers in Oncology | www.frontiersin.org March 2021 | Volume 11 | Article 61078511
APPENDIX 1. FORMULAS OF THREE
RADIOMICS MODELS
B-mode RAD-SCORE: 0.1832+wavelet-HLH_glszm_
ZoneEntropy@b×0.5937logarithm_rstorder_Kurtosis@
b×0.5746wavelet-HLL_rstorder_Minimum@b×0.5204
+wavelet-HHH_glszm_ZoneEntropy@b×0.5094
exponential_glszm_SmallAreaHighGrayLevelEmphasis@
b×0.4606wavelet-HHH_rstorder_Kurtosis@b×0.4558
+wavelet-HHL_gldm_DependenceNonUniformity
Normalized@b×0.4526wavelet-LHL_gldm_SmallDependence
LowGrayLevelEmphasis@b×0.44+wavelet-LHH_glszm_
GrayLevelVariance@b×0.3751wavelet-HHH_glcm_Maximum
Probability@b×0.3649wavelet-HHL_rstorder_Mean@
b×0.3207wavelet-LHL_gldm_DependenceVariance@b×0.3118
+wavelet-HHH_glszm_SmallAreaHighGrayLevelEmphasis@
b×0.3083wavelet-HHH_glszm_ZonePercentage@b×0.2929
+original_shape_Elongation@b×0.2905+wavelet-
HHH_glrlm_LowGrayLevelRunEmphasis@b×0.2846+wavelet-
HLL_gldm_DependenceNonUniformityNormalized@b×0.2809
+ gradient_glszm_SizeZoneNonUniformityNormalized@
b×0.2713wavelet-HHH_rstorder_Mean@b×0.2596
+square_glszm_LowGrayLevelZoneEmphasis@b×0.2353
SWE RAD-SCORE: 0.0836wavelet-LLH_glszm_Zone
Entropy@swe×0.8769+wavelet-HHH_glszm_ZoneEntropy@
swe×0.6888+wavelet-LLL_gldm_LargeDependenceHighGray
LevelEmphasis@swe×0.5955wavelet-HLL_glszm_
LargeAreaLowGrayLevelEmphasis@swe×0.5776gradient_
rstorder_10Percentile@swe×0.4288wavelet-HHH_rstorder_
Mean@swe×0.38wavelet-LHH_glcm_MaximumProbability@
swe×0.3763wavelet-HLL_rstorder_Skewness@swe×0.3663
+wavelet-LHH_glszm_ZoneEntropy@swe×0.3531+wavelet-
LHH_glrlm_GrayLevelVariance@swe×0.3201
+original_glszm_SizeZoneNonUniformityNormalized@
swe×0.3135wavelet-HHH_rstorder_Skewness@swe×0.2899
+wavelet-HHL_glcm_ClusterShade@swe×0.2702
logarithm_glrlm_RunLengthNonUniformity@swe×0.2654
logarithm_glszm_SmallAreaLowGrayLevelEmphasis@
swe×0.2582wavelet-HLL_glcm_MaximumProbability@
swe×0.2419+wavelet-HHH_glrlm_ShortRunHighGray
LevelEmphasis@swe×0.2303+wavelet-LHH_glszm_
SmallAreaHighGrayLevelEmphasis@swe×0.1917wavelet-
LHH_glszm_GrayLevelVariance@swe×0.1844wavelet-
LLH_glszm_ZoneEntropy×1.4254
Multiparametric RAD-SCORE: -0.2383wavelet-LLH_
glszm_ZoneEntropy@swe×0.7143logarithm_rstorder_
Kurtosis@b×0.6721wavelet-HLL_rstorder_Minimum@
b×0.6536+wavelet-HHL_gldm_DependenceNonUniformity
Normalized@b×0.5464+wavelet-HHH_glszm_ZoneEntropy@
swe×0.5366gradient_rstorder_10Percentile@swe×0.532
+wavelet-LHH_glszm_ZoneEntropy@swe×0.4812wavelet-
LHL_gldm_SmallDependenceLowGrayLevelEmphasis@
b×0.4767logarithm_glrlm_RunLengthNonUniformity@
swe×0.4657wavelet-HHL_rstorder_Mean@b×0.4663
exponential_glszm_SmallAreaHighGrayLevelEmphasis@
b×0.4619+wavelet-LHH_glrlm_LowGrayLevelRunEmphasis@
b×0.4544+wavelet-LHH_glszm_GrayLevelVariance@b×0.4479
+exponential_glcm_Correlation@b×0.4148+original_glszm_
SizeZoneNonUniformityNormalized@swe×0.4077+wavelet-
HHH_glszm_GrayLevelNonUniformityNormalized@
swe×0.3646wavelet-LHH_glcm_MaximumProbability@
swe×0.3372+gradient_glszm_SizeZoneNonUniformity
Normalized@b×0.3029logarithm_glszm_SmallAreaLowGray
LevelEmphasis@swe×0.2991wavelet-HHH_glrlm_
GrayLevelNonUniformityNormalized@swe×0.2899wavelet-
LLH_glszm_ZoneE-ntropy@swe×0.2865
Liang et al. Nomogram Model for Discrimination Prostate Lesions
Frontiers in Oncology | www.frontiersin.org March 2021 | Volume 11 | Article 61078512
... These regions include the medial and lateral apex, medial and lateral mid-prostate, and medial and lateral base in both lobes of the prostate. The biopsy procedure involves sampling from each of these 12 designated regions for diagnostic purposes [16,17]. In addition, one or two extra needles were used to further biopsy the suspicious area. ...
... In a study conducted by Wildeboer et al [23] they reported that a multiparametric classifier, which combined B-mode, SWE, and CEUS, achieved an AUC of 0.75 for PCa and 0.9 for significant PCa. Liang et al [17] reported a clinical-radiomics combined model with an AUC value of 0.90 for PCa. ...
Article
Aim: Prostate cancer (PCa) is one of the most common neoplasms in men. However, the value of ultrasound-based radiomics for diagnosing PCa remains uncertain. Material and methods: We retrospectively analyzed ultrasonic and clinical data from 373 patients. Patients were divided into two groups according to the pathological results. Radiomics features wereextracted from TRUS, and we screened the optimal features to construct radiomics models. Relationships between clinical characteristics and prostate lesions were identified by univariate and multivariate logistic regression analysis. Finally, a clinical-radiomics model was developed, and then visualized in the form of a nomogram. Results: Of the 373 patients, 178 had benign disease and 195 had malignant disease. The support vector machine (SVM) classification model showed the best performance, while the diagnostic performance of the clinical model was poorer than that of the radiomics model (p<0.05) or the combined (clinical-radiomics) model (p<0.05). In general, the combined model demonstrated the highest AUC and proved to be more advantageous. Conclusion: The prediction model we constructed based on TRUS predicted PCa preoperatively with high efficiency. In addition, combining radiomics with clinical factors improved diagnostic accuracy.
... Previous study [1] indicated that regions assigned a Gleason score of 7 exhibited statistically higher Young's modulus compared to regions with a Gleason score of 6. Building upon this finding, Wildeboer et al. [19] developed a random forest classifier analyzing B-mode, SWE and contrast-enhanced ultrasound, reached area under curves (AUC) of 0.75 for PCa. Liang et al. [10] utilized a radiomics model that incorporated B-mode and SWE to classify the PCa and achieved an AUC of 0.85. Notably, the above two methods required the biopsy pathology as reference to draw all region of interests (ROIs). ...
Preprint
Prostate cancer is a highly prevalent cancer and ranks as the second leading cause of cancer-related deaths in men globally. Recently, the utilization of multi-modality transrectal ultrasound (TRUS) has gained significant traction as a valuable technique for guiding prostate biopsies. In this study, we propose a novel learning framework for clinically significant prostate cancer (csPCa) classification using multi-modality TRUS. The proposed framework employs two separate 3D ResNet-50 to extract distinctive features from B-mode and shear wave elastography (SWE). Additionally, an attention module is incorporated to effectively refine B-mode features and aggregate the extracted features from both modalities. Furthermore, we utilize few shot segmentation task to enhance the capacity of classification encoder. Due to the limited availability of csPCa masks, a prototype correction module is employed to extract representative prototypes of csPCa. The performance of the framework is assessed on a large-scale dataset consisting of 512 TRUS videos with biopsy-proved prostate cancer. The results demonstrate the strong capability in accurately identifying csPCa, achieving an area under the curve (AUC) of 0.86. Moreover, the framework generates visual class activation mapping (CAM), which can serve as valuable assistance for localizing csPCa. These CAM images may offer valuable guidance during TRUS-guided targeted biopsies, enhancing the efficacy of the biopsy procedure.The code is available at https://github.com/2313595986/SmileCode.
... При статистическом анализе данных использовались подходы доказательной медицины в соответствии с критериями применимости [44][45][46]. Количественные показатели проверялись на соответствие нормальному распределению путем использования критериев Шапиро -Уилка (при n<50) или Колмогорова -Смирнова (при n≥50) с анализом значений асимметрии и эксцесса. Для описания характеристики групп применялись показатели переменных с представлением их в виде среднего значения (x) со стандартным отклонением (±σ) при соответствии нормальному распределению и медианы (median, Me) с межквартильным размахом (interquartile range [IQR]) при их отличии. ...
Article
В статье представлен анализ диагностических признаков рака предстательной железы с разработкой новой модели прогнозирования с использованием мультипараметрической МРТ, трансректального УЗИ с эластографией сдвиговой волны и изоформ ПСА. С целью верификации диагноза проводилась систематическая биопсия, дополненная целевым этапом. The article presents an analysis of the diagnostic features of prostate cancer with the development of a new prediction model using multiparametric MRI, transrectal ultrasound with shear wave elastography and PSA isoforms. To verify the diagnosis, a systematic biopsy was performed, supplemented by a target stage.
... They then assembled 3 K-nearest neighbors models to classify PCa malignancy and to predict low/intermediate and high-risk dichotomies. In 2021, Liang et al. [7] reported good performance in predicting PCa malignancy using a multiparametric radiomic model and a combined clinical-radiomic model. More recently, in 2023, Yang et al. [8] demonstrated good performance in predicting PCa risk stratifications based on functional subsets of peripheral lymphocytes. ...
Article
Purpose: Prostate cancer (PCa) is an epithelial malignancy that originates in the prostate gland and is generally categorized into low, intermediate, and high-risk groups. The primary diagnostic indicator for PCa is the measurement of serum prostate-specific antigen (PSA) values. However, reliance on PSA levels can result in false positives, leading to unnecessary biopsies and an increased risk of invasive injuries. Therefore, it is imperative to develop an efficient and accurate method for PCa risk stratification. Many recent studies on PCa risk stratification based on clinical data have employed a binary classification, distinguishing between low to intermediate and high risk. In this paper, we propose a novel machine learning (ML) approach utilizing a stacking learning strategy for predicting the tripartite risk stratification of PCa.Methods: Clinical records, featuring attributes selected using the lasso method, were utilized with 5 ML classifiers. The outputs of these classifiers underwent transformation by various nonlinear transformers and were then concatenated with the lasso-selected features, resulting in a set of new features. A stacking learning strategy, integrating different ML classifiers, was developed based on these new features.Results: Our proposed approach demonstrated superior performance, achieving an accuracy of 0.83 and an area under the receiver operating characteristic curve value of 0.88 in a dataset comprising 197 PCa patients with 42 clinical characteristics.Conclusions: This study aimed to improve clinicians’ ability to rapidly assess PCa risk stratification while reducing the burden on patients. This was achieved by using artificial intelligence-related technologies as an auxiliary method for diagnosing PCa.
... Leo et al. [70] ; Kwak and Hewitt [71] ; Kwak and Hewitt [72] ; Pantanowitz et al. [19] ; Han et al. [73] Radiomics Li et al. [74] ; Liang et al. [75] AI in pathology and radiology (Green) ...
Article
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Prostate cancer stands as one of the most prevalent cancers globally among men, exhibiting substantial geographical variations in both incidence and mortality. While developed countries bear a higher incidence, developing countries grapple with elevated mortality rates. The heightened mortality in the latter is attributed to variations in practices that impede early diagnosis. In this context, the integration of artificial intelligence (AI) and machine learning (ML) has become increasingly common to improve the diagnostic accuracy of prostate cancer. This review delves into the existing literature to scrutinize the utilization of AI and ML in the diagnosis of prostate cancer. To compile relevant literature, comprehensive searches were conducted on research databases, including SCOPUS, Web of Science, and Google Scholar, to identify articles related to AI or ML (AI/ML) in the diagnosis and management of prostate cancer. Using a screening criterion, 293 reviewed research papers were identified. The two most consistent themes were predictive modeling and the application of AI/ML tools for cancer grading and radiomics. AI and ML enhance diagnostic accuracy by reducing inter-individual variation in Gleason's scoring and complimenting the interpretation of multiparametric magnetic resonance imaging (mpMRI). A few publications reported the use of AI/ML tools that combine histopathology with MRI signals. The literature surveyed indicates a compelling potential for AI and ML to improve diagnostic accuracy in prostate cancer. Emerging literature suggests the use of a combination of demographic features, clinical data, serological markers, pathological grading and radiological factors, and genomic data to propose an accurate, non-invasive diagnosis of clinically significant prostate cancer.
... And achieved remarkable performance in different tasks, such as, medical image classification, lesion segmentation, lesion detection, etc. Specifically, deep learning has been used in brain tumor segmentation [9], breast cancer diagnosis [10], lung nodule detection [11][12][13], abdominal disease diagnosis [14,15], and bone disease diagnosis and measurement [16,17]. Moreover, there has been some studies on pneumonia detection [18][19][20][21][22]. ...
Article
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Purpose Development and assessment the deep learning weakly supervised algorithm for the classification and detection pneumonia via X-ray. Methods This retrospective study analyzed two publicly available dataset that contain X-ray images of pneumonia cases and normal cases. The first dataset from Guangzhou Women and Children’s Medical Center. It contains a total of 5,856 X-ray images, which are divided into training, validation, and test sets with 8:1:1 ratio for algorithm training and testing. The deep learning algorithm ResNet34 was employed to build diagnostic model. And the second public dataset were collated by researchers from Qatar University and the University of Dhaka along with collaborators from Pakistan and Malaysia and some medical doctors. A total of 1,300 images of COVID-19 positive cases, 1,300 normal images and 1,300 images of viral pneumonia for external validation. Class activation map (CAM) were used to location the pneumonia lesions. Results The ResNet34 model for pneumonia detection achieved an AUC of 0.9949 [0.9910–0.9981] (with an accuracy of 98.29% a sensitivity of 99.29% and a specificity of 95.57%) in the test dataset. And for external validation dataset, the model obtained an AUC of 0.9835[0.9806–0.9864] (with an accuracy of 94.62%, a sensitivity of 92.35% and a specificity of 99.15%). Moreover, the CAM can accurately locate the pneumonia area. Conclusion The deep learning algorithm can accurately detect pneumonia and locate the pneumonia area based on weak supervision information, which can provide potential value for helping radiologists to improve their accuracy of detection pneumonia patients through X-ray images.
... In previous studies, a growing number of studies have focused on MRI using radiomics or deep learning approaches [23]. Only a few studies have focused on ultrasound in PCa-related medical decisions [24][25][26], and no prospective studies have been made to evaluate the diagnostic performance of CEUS combined with parameters through a machine learning approach. ...
Article
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To construct machine learning models based on radiomics features combing conventional transrectal ultrasound (B-mode) and contrast-enhanced ultrasound (CEUS) to improve prostate cancer (PCa) detection in peripheral zone (PZ). A prospective study of 166 men (72 benign, 94 malignant lesions) with targeted biopsy-confirmed pathology who underwent B-mode and CEUS examinations was performed. Risk factors, including age, serum total prostate-specific antigen (tPSA), free PSA (fPSA), f/t PSA, prostate volume and prostate-specific antigen density (PSAD), were collected. Time-intensity curves were obtained using SonoLiver software for all lesions in regions of interest. Four parameters were collected as risk factors: the maximum intensity (IMAX), rise time (RT), time to peak (TTP), and mean transit time (MTT). Radiomics features were extracted from the target lesions from B-mode and CEUS imaging. Multivariable logistic regression analysis was used to construct the model. A total of 3306 features were extracted from seven categories. Finally, 32 features were screened out from radiomics models. Five models were developed to predict PCa: the B-mode radiomics model (B model), CEUS radiomics model (CEUS model), B-CEUS combined radiomics model (B-CEUS model), risk factors model, and risk factors-radiomics combined model (combined model). Age, PSAD, tPSA, and RT were significant independent predictors in discriminating benign and malignant PZ lesions (P < 0.05). The risk factors model combing these four predictors showed better discrimination in the validation cohort (area under the curve [AUC], 0.84) than the radiomics images (AUC, 0.79 on B model; AUC, 0.78 on CEUS model; AUC, 0.83 on B-CEUS model), and the combined model (AUC: 0.89) achieved the greatest predictive efficacy. The prediction model including B-mode and CEUS radiomics signatures and risk factors represents a promising diagnostic tool for PCa detection in PZ, which may contribute to clinical decision-making.
... And three K-nearest neighbors (KNN) models were ensembled to achieve malignancy classi cation of PCa and prediction of low/intermediate and high-risk dichotomies. In 2021, Liang et al. [7] achieved good performance in the prediction of malignancy PCa based on a multiparametric radiomic model and a combined clinical-radiomic model. In 2023, Yang et al. [8] achieved good performance in the prediction of risk stratifcations of PCa based on functional subsets of peripheral lymphocyte. ...
Preprint
Full-text available
Prostate cancer (PCa) is an epithelial malignancy that occurs in the prostate gland and is generally classified into three risk categories: low, intermediate, and high risk. The most important diagnostic indicator for PCa is the measurement of serum prostate-specific antigen (PSA) values, but this method can produce false positives leading to unnecessary biopsies, increasing the likelihood of invasive injuries. Therefore, it is imperative to develop an efficient and accurate method to predict PCa risk stratifications. Most current studies on predictions of PCa risk stratification based on clinical data generally perform only a dichotomy of low to intermediate and high risk. This paper proposed a novel machine learning (ML) approach based on a Stacking learning strategy to predict tripartite risk stratifications of PCa. Clinical records with features selected by Lasso were learned by five ML classifiers. Outputs of five classifiers were transformed by various nonlinear transformers (NT) and then, concatenated with the Lasso-selected features to obtain a set of new features. A Stacking learning strategy integrating different ML classifiers was developed based on these new features. Our proposed approach achieved superior performance with an accuracy (ACC) of 0.83 and an Area Under the Receiver Operating Characteristic curve (AUC) value of 0.88 in a dataset of 197 PCa patients with 42 clinical characteristics. This study will better assist clinicians in rapidly assessing PCa risk stratifications while reducing patient burden through AI-related technologies in auxiliary diagnosis of PCa.
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Simple Summary The integration of artificial intelligence (AI) into radiomic models has become increasingly popular due to advances in computer-aided diagnosis tools. These tools utilize statistical and machine learning methods to evaluate various medical image analysis modalities. In the case of prostate cancer, there are multiple areas in the radiomics pipeline that can be improved. This article explores the latest developments in mpMRI for PCa and examines the radiomic flowchart, as well as the fusion of traditional medical imaging with AI to overcome challenges and limitations in clinical applications. Furthermore, it addresses challenges related to radiomics, radiogenomics, and multi-omics in prostate cancer and suggests the necessary critical steps for clinical validation. Abstract The use of multiparametric magnetic resonance imaging (mpMRI) has become a common technique used in guiding biopsy and developing treatment plans for prostate lesions. While this technique is effective, non-invasive methods such as radiomics have gained popularity for extracting imaging features to develop predictive models for clinical tasks. The aim is to minimize invasive processes for improved management of prostate cancer (PCa). This study reviews recent research progress in MRI-based radiomics for PCa, including the radiomics pipeline and potential factors affecting personalized diagnosis. The integration of artificial intelligence (AI) with medical imaging is also discussed, in line with the development trend of radiogenomics and multi-omics. The survey highlights the need for more data from multiple institutions to avoid bias and generalize the predictive model. The AI-based radiomics model is considered a promising clinical tool with good prospects for application.
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Radiomics is an emerging field of image analysis with potential applications in patient risk stratification. This study developed and evaluated machine learning models using quantitative radiomic features extracted from multiparametric magnetic resonance imaging (mpMRI) to detect and classify prostate cancer (PCa). In total, 191 patients that underwent prostatic mpMRI and combined targeted and systematic fusion biopsy were retrospectively included. Segmentations of the whole prostate glands and index lesions were performed manually in apparent diffusion coefficient (ADC) maps and T2-weighted MRI. Radiomic features were extracted from regions corresponding to the whole prostate gland and index lesion. The best performing combination of feature setup and classifier was selected to compare its predictive ability of the radiologist’s evaluation (PI-RADS), mean ADC, prostate specific antigen density (PSAD) and digital rectal examination (DRE) using receiver operating characteristic (ROC) analysis. Models were evaluated using repeated 5-fold cross-validation and a separate independent test cohort. In the test cohort, an ensemble model combining a radiomics model, with models for PI-RADS, PSAD and DRE achieved high predictive AUCs for the differentiation of (i) malignant from benign prostatic lesions (AUC = 0.889) and of (ii) clinically significant (csPCa) from clinically insignificant PCa (cisPCa) (AUC = 0.844). Our combined model was numerically superior to PI-RADS for cancer detection (AUC = 0.779; p = 0.054) as well as for clinical significance prediction (AUC = 0.688; p = 0.209) and showed a significantly better performance compared to mADC for csPCa prediction (AUC = 0.571; p = 0.022). In our study, radiomics accurately characterizes prostatic index lesions and shows performance comparable to radiologists for PCa characterization. Quantitative image data represent a potential biomarker, which, when combined with PI-RADS, PSAD and DRE, predicts csPCa more accurately than mADC. Prognostic machine learning models could assist in csPCa detection and patient selection for MRI-guided biopsy.
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PURPOSE For patients with primary cutaneous melanoma, the risk of sentinel node (SN) metastasis varies according to several clinicopathologic parameters. Patient selection for SN biopsy can be assisted by National Comprehensive Cancer Network (NCCN) and ASCO/Society of Surgical Oncology (SSO) guidelines and the Memorial Sloan Kettering Cancer Center (MSKCC) online nomogram. We sought to develop an improved online risk calculator using alternative clinicopathologic parameters to more accurately predict SN positivity. PATIENTS AND METHODS Data from 3,477 patients with melanoma who underwent SN biopsy at Melanoma Institute Australia (MIA) were analyzed. A new nomogram was developed by replacing body site and Clark level from the MSKCC model with mitotic rate, melanoma subtype, and lymphovascular invasion. The predictive performance of the new nomogram was externally validated using data from The University of Texas MD Anderson Cancer Center (n = 3,496). RESULTS The MSKCC model receiver operating characteristic curve had a predictive accuracy of 67.7% (95% CI, 65.3% to 70.0%). The MIA model had a predictive accuracy of 73.9% (95% CI, 71.9% to 75.9%), a 9.2% increase in accuracy over the MSKCC model ( P < .001). Among the 2,748 SN-negative patients, SN biopsy would not have been offered to 22.1%, 13.4%, and 12.4% based on the MIA model, the MSKCC model, and NCCN or ASCO/SSO criteria, respectively. External validation generated a C-statistic of 75.0% (95% CI, 73.2% to 76.7%). CONCLUSION A robust nomogram was developed that more accurately estimates the risk of SN positivity in patients with melanoma than currently available methods. The model only requires the input of 6 widely available clinicopathologic parameters. Importantly, the number of patients undergoing unnecessary SN biopsy would be significantly reduced compared with use of the MSKCC nomogram or the NCCN or ASCO/SSO guidelines, without losing sensitivity. An online calculator is available at www.melanomarisk.org.au .
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Prostate cancer (PCa) is a disease affecting an increasing number of men worldwide. Several efforts have been made to identify imaging biomarkers to non-invasively detect and characterize PCa, with substantial improvements thanks to multiparametric Magnetic Resonance Imaging (mpMRI). In recent years, diffusion kurtosis imaging (DKI) was proposed to be directly related to tissue physiological and pathological characteristic, while the radiomic approach was proven to be a key method to study cancer imaging phenotypes. Our aim was to compare a standard radiomic model for PCa detection, built using T2-weighted (T2W) and Apparent Diffusion Coefficient (ADC), with an advanced one, including DKI and quantitative Dynamic Contrast Enhanced (DCE), while also evaluating differences in prediction performance when using 2D or 3D lesion segmentation. The obtained results in terms of diagnostic accuracy were high for all of the performed comparisons, reaching values up to 0.99 for the area under a receiver operating characteristic curve (AUC), and 0.98 for both sensitivity and specificity. In comparison, the radiomic model based on standard features led to prediction performances higher than those of the advanced model, while greater accuracy was achieved by the model extracted from 3D segmentation. These results provide new insights into active topics of discussion, such as choosing the most convenient acquisition protocol and the most appropriate postprocessing pipeline to accurately detect and characterize PCa.
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Objectives: The aim of this study was to assess the potential of machine learning based on B-mode, shear-wave elastography (SWE), and dynamic contrast-enhanced ultrasound (DCE-US) radiomics for the localization of prostate cancer (PCa) lesions using transrectal ultrasound. Methods: This study was approved by the institutional review board and comprised 50 men with biopsy-confirmed PCa that were referred for radical prostatectomy. Prior to surgery, patients received transrectal ultrasound (TRUS), SWE, and DCE-US for three imaging planes. The images were automatically segmented and registered. First, model-based features related to contrast perfusion and dispersion were extracted from the DCE-US videos. Subsequently, radiomics were retrieved from all modalities. Machine learning was applied through a random forest classification algorithm, using the co-registered histopathology from the radical prostatectomy specimens as a reference to draw benign and malignant regions of interest. To avoid overfitting, the performance of the multiparametric classifier was assessed through leave-one-patient-out cross-validation. Results: The multiparametric classifier reached a region-wise area under the receiver operating characteristics curve (ROC-AUC) of 0.75 and 0.90 for PCa and Gleason > 3 + 4 significant PCa, respectively, thereby outperforming the best-performing single parameter (i.e., contrast velocity) yielding ROC-AUCs of 0.69 and 0.76, respectively. Machine learning revealed that combinations between perfusion-, dispersion-, and elasticity-related features were favored. Conclusions: In this paper, technical feasibility of multiparametric machine learning to improve upon single US modalities for the localization of PCa has been demonstrated. Extended datasets for training and testing may establish the clinical value of automatic multiparametric US classification in the early diagnosis of PCa. Key points: • Combination of B-mode ultrasound, shear-wave elastography, and contrast ultrasound radiomics through machine learning is technically feasible. • Multiparametric ultrasound demonstrated a higher prostate cancer localization ability than single ultrasound modalities. • Computer-aided multiparametric ultrasound could help clinicians in biopsy targeting.
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Prostate cancer is the second most frequent cancer diagnosis made in men and the fifth leading cause of death worldwide. Prostate cancer may be asymptomatic at the early stage and often has an indolent course that may require only active surveillance. Based on GLOBOCAN 2018 estimates, 1,276,106 new cases of prostate cancer were reported worldwide in 2018, with higher prevalence in the developed countries. Differences in the incidence rates worldwide reflect differences in the use of diagnostic testing. Prostate cancer incidence and mortality rates are strongly related to the age with the highest incidence being seen in elderly men (> 65 years of age). African-American men have the highest incidence rates and more aggressive type of prostate cancer compared to White men. There is no evidence yet on how to prevent prostate cancer; however, it is possible to lower the risk by limiting high-fat foods, increasing the intake of vegetables and fruits and performing more exercise. Screening is highly recommended at age 45 for men with familial history and African-American men. Up-to-date statistics on prostate cancer occurrence and outcomes along with a better understanding of the etiology and causative risk factors are essential for the primary prevention of this disease.
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Purpose: To evaluate the performance of radiomic features (RF) derived from PSMA PET for intraprostatic tumor discrimination and non-invasive characterization of Gleason score (GS) and pelvic lymph node status. Patients and methods: Patients with prostate cancer (PCa) who underwent [68Ga]-PSMA-11 PET/CT followed by radical prostatectomy and pelvic lymph node dissection were prospectively enrolled (n=20). Coregistered histopathological gross tumor volume (GTV-Histo) in the prostate served as reference. 133 RF were derived from GTV-Histo and from manually created segmentations of the intraprostatic tumor volume (GTV-Exp). Spearman´s correlation coefficients (ρ) were assessed between RF derived from the different GTVs. We additionally analyzed the differences in RF values for PCa and non-PCa tissues. Furthermore, areas under receiver-operating characteristics curves (AUC) were calculated and uni- and multivariate analyses were performed to evaluate the RF based discrimination of GS 7 and ≥8 disease and of patients with nodal spread (pN1) and non-nodal spread (pN0) in surgical specimen. The results found in the latter analyses were validated by a retrospective cohort of 40 patients. Results: Most RF from GTV-Exp showed strong correlations with RF from GTV-Histo (86% with ρ>0.7). 81% and 76% of RF from GTV-Exp and GTV-Histo significantly discriminated between PCa and non-PCa tissue. The texture feature QSZHGE discriminated between GS 7 and ≥8 considering GTV-Histo (AUC=0.93) and GTV-Exp (prospective cohort: AUC=0.91 / validation cohort: AUC=0.84). QSZHGE also discriminated between pN1 and pN0 disease considering GTV-Histo (AUC=0.85) and GTV-Exp (prospective cohort: AUC=0.87 / validation cohort: AUC=0.85). In uni- and multivariate analyses including patients of both cohorts QSZHGE was a statistically significant (p<0.01) predictor for PCa patients with GS ≥8 tumors and pN1 status. Conclusion: RF derived from PSMA PET discriminated between PCa and non-PCa tissue within the prostate. Additionally, the texture feature QSZHGE discriminated between GS 7 and GS ≥8 tumors and between patients with pN1 and pN0 disease. Our results support the role of RF in PSMA PET as a new tool for non-invasive PCa discrimination and characterization of its biological properties.
Article
Introduction Liver stiffness measurement (LSM) assessed by transient elastography (FibroScan®) has been demonstrated to predict post-hepatectomy liver failure (PHLF) in patients who underwent hepatic resection for hepatocellular carcinoma (HCC). However, other complications, besides PHLF, can be related to the underlying grade of liver fibrosis. This study aimed to identify predictors of postoperative complications calculated by the comprehensive complication index (CCI) and to build and develop a novel nomogram able to identify patients at risk of developing severe postoperative complications. Materials And Methods Data of patients treated by hepatectomy for HCC between 2006 and 2016 at two referral centres, were retrospectively reviewed. All surgical complications were recorded and scored using the CCI, ranging from 0 (uneventful course) to 100 (death). A CCI ≥26.2 was used as a threshold to define patients having severe complications. Results During the study period, 471 patients underwent hepatic resection for HCC. Among them, 50 patients (10.6%) had a CCI≥26.2. Age, MELD score and LSM values together with serum albumin were independent predictors of high CCI. The nomogram built on these variables was internally validated and showed good performance (optimism-corrected c-statistic = 0.751). A regression equation to predict the CCI was also established by multiple linear regression analysis: [LSM(kPa)×0.254]+[age(years)×0.118]+[MELD score(pt.)×1.050]-[albumin (g/dL)×2.395]-3.639. Conclusion This novel nomogram, combining LSM values, age and liver function tests provided an excellent preoperative prediction of high CCI in patients with resectable HCC. This predictive model could be used as a reference for clinicians and surgeons to help them in clinical decision-making.
Article
Background: To evaluate the potential of clinical-based model, a biparametric MRI-based radiomics model and a clinical-radiomics combined model for predicting clinically significant prostate cancer (PCa). Methods: In total, 381 patients with clinically suspicious PCa were included in this retrospective study; of those, 199 patients did not have PCa upon biopsy, while 182 patients had PCa. All patients underwent 3.0-T MRI examinations with the same acquisition parameters, and clinical risk factors associated with PCa (age, prostate volume, serum PSA, etc.) were collected. We randomly stratified the training and test sets using a 6:4 ratio. The radiomic features included gradient-based histogram features, grey-level co-occurrence matrix (GLCM), run-length matrix (RLM), and grey-level size zone matrix (GLSZM). Three models were developed using multivariate logistic regression analysis to predict clinically significant PCa: a clinical model, a radiomics model and a clinical-radiomics combined model. The diagnostic performance and clinical net benefit of each model were compared via receiver operating characteristic (ROC) curve analysis and decision curves, respectively. Results: Both the radiomics model (AUC: 0.98) and the clinical-radiomics combined model (AUC: 0.98) achieved greater predictive efficacy than the clinical model (AUC: 0.79). The decision curve analysis also showed that the radiomics model and combined model had higher net benefits than the clinical model. Conclusions: Compared with the evaluation of clinical risk factors associated with PCa only, the radiomics-based machine learning model can improve the predictive accuracy for clinically significant PCa, in terms of both diagnostic performance and clinical net benefit.
Article
Objectives To analyze the diagnostic value of adding SWE to MRI for the diagnosis of clinically significant prostate cancer with false-negative MRI results. Methods This was a retrospective study of 367 patients who underwent MRI, SWE, and prostate biopsy between March 2016 and November 2018 at the Shanghai Tenth People’s Hospital. Serum prostate-specific antigen (PSA) and free PSA (fPSA) were measured preoperatively. Diagnostic value and accuracy was determined for MRI alone and MRI + SWE using the receiver operator characteristic curve (ROC) analysis. Results MRI misdiagnosed 17.9% (21/117) clinically significant prostate cancers, including 15 lesions in the peripheral zone and 6 in the central zone. Both qualitative and quantitative SWE could help detect 66.7% (10/15) significant prostate cancers with false-negative MRI, but there was no association with the Gleason score (p > 0.05). When considering the sextant of the peripheral zone, a significant association was not seen with histopathology in qualitative SWE (p = 0.071) and quantitative SWE (p = 0.598). Among age, PSA, fPSA, volume of the prostate gland, fPSA/PSA, and PSAD, only PSAD (p = 0.019) was associated with SWE results in patients with negative MRI. Conclusions Adding SWE to MRI in patients with negative MRI for prostate examination could allow the correct diagnosis of additional patients and reduce the false-negative rate. Key Points • MRI plays an important role in clinically significant prostate cancers diagnosis. • SWE plays an important role in clinically significant prostate cancers with negative MRI. • Adding SWE to MRI in patients with negative MRI for prostate examination could allow the correct diagnosis of additional patients and reduce the false-negative rate.
Article
Background The diagnostic accuracy of magnetic resonance imaging (MRI)-targeted biopsy by using transperineal (TP) versus transrectal (TR) route in the detection of clinically significant prostate cancer (csPCa) has yet to be revealed. Materials and methods A systematic search in Pubmed, Embase, Ovid and the Cochrane Library up to April 2019 was conducted. We pooled odds ratio (OR) with 95% confidence intervals (CIs) for csPCa detected by TP and TR MRI-targeted biopsy. The relative sensitivity (or risk ratio, RR) between TP and TR route were synthesized. We also pooled the diagnostic sensitivity of either approach using the combined biopsy results as the reference standard. Results A total of 328 patients with positive multiparametric MRI (mpMRI) underwent TP MRI-targeted biopsy and 315 patients underwent TR MRI-targeted biopsy. TP route detected more csPCa with the detection rate of 62.2% (204/328) in comparison with that of 41.3% (130/315) for TR route (OR 2.37, 95% CI 1.71-3.26). After adjusting for differences in cancer prevalence, TP MRI-targeted biopsy detected 91.3% (105/115) of csPCa compared with that of 72.2% (83/115) by using TR route (RR 1.26, 95% CI 1.02-1.54). The pooled diagnostic sensitivity of TP route (86%, 95% CI 77%-96%) was superior than that of TR route (73%, 62%-88%). TR approach missed more csPCa located at anterior zone of the prostate (20 vs. 3). Conclusions TP performed better than TR route in MRI-targeted biopsy, especially in detecting csPCa located at anterior prostate. More large, prospective randomized or head-to-head comparison studies comparing the two approaches are warranted.