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Pleurocordyceps gen. nov. for a clade of fungi previously included in Polycephalomyces based on molecular phylogeny and morphology

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Since the discovery of the Pleurocordyceps/‘Polycephalomyces’ clade unaffiliated with the clades of Clavicipitaceae s. str., Ophiocordycipitaceae and Cordycipitaceae of clavicipitaceous fungi, a number of taxa have been published subsequently and more fungal material relevant to the group have become available for further study. Here, a multi‐gene phylogeny using nrSSU, nrLSU, tef1, rpb1, and rpb2 was constructed with some of the recently discovered additional taxa by ML and Bayesian analyses to test and refine the current phylogenetic framework for Cordyceps s. lat. and other clavicipitaceous fungi. In addition to the well‐supported major Pleurocordyceps/‘Polycephalomyces’ clade revealed previously, another clade with newly added taxa referred to as ‘Polycephalomyces formosus‐like’ from Japan was found to be sister to the Pleurocordyceps/‘Polycephalomyces’ clade. Extensive investigation revealed that strains named ‘Polycephalomyces formosus‐like’ grouped in this new clade and do indeed represent the true Polycephalomyces formosus and that species previously included in the genus Polycephalomyces require a new generic name. Based on the phylogenetic analyses and morphological characteristics, including available both sexual and asexual morphs when available, the new generic name Pleurocordyceps is introduced and relevant new combinations are made. A newly designated lectotype and a supporting epitype for Polycephalomyces formosus is selected and the circumscription of Polycephalomyces is discussed. This article is protected by copyright. All rights reserved.
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J
SE Journal of Systematics
and Evolution doi: 10.1111/jse.12705
Research Article
Pleurocordyceps gen. nov. for a clade of fungi previously
included in Polycephalomyces based on molecular
phylogeny and morphology
YongHui Wang
1,2
, Sayaka Ban
3
, WenJing Wang
1
,YiLi
4
, Ke Wang
1
, Paul M. Kirk
1,5
, Kathryn E. Bushley
6
,
CaiHong Dong
1
, David L. Hawksworth
7,8,9
, and YiJian Yao
1
*
1
State Key Laboratory of Mycology, Institute of Microbiology, Chinese Academy of Sciences, Beijing 100101, China
2
University of Chinese Academy of Sciences, Beijing 100049, China
3
Medical Mycology Research Center, Chiba University, 181, Inohana, Chuoku, Chiba 2608673, Japan
4
College of Food Science and Engineering, Yangzhou University, Yangzhou 225127, Jiangsu, China
5
Biodiversity Informatics & Spatial Analysis, Royal Botanic Gardens, Kew, Richmond, Surrey TW9 3AB, UK
6
Department of Plant and Microbial Biology, University of Minnesota, St. Paul, MN 55108, USA
7
Department of Life Sciences, The Natural History Museum, Cromwell Road, London SW7 5BD, UK
8
Comparative Plant and Fungal Biology, Royal Botanic Gardens, Kew, Surrey TW9 3DS, UK
9
Jilin Agricultural University, Changchun 130118, China
*Author for correspondence. Email: yaoyj@im.ac.cn
Received 4 November 2019; Accepted 29 October 2020; Article rst published online 9 November 2020
Abstract Since the discovery of the Pleurocordyceps/ Polycephalomycesclade unaliated with the clades of
Clavicipitaceae s. str., Ophiocordycipitaceae, and Cordycipitaceae of clavicipitaceous fungi, some taxa have been
published and more fungal material relevant to the group have become available for further study. Here, a
multigene phylogeny using nrSSU, nrLSU, tef1, rpb1, and rpb2 was constructed with some of the recently
discovered additional taxa using maximum likelihood and Bayesian analyses (BI) to test and rene the current
phylogenetic framework for Cordyceps s. lat. and other clavicipitaceous fungi. In addition to the well supported
major Pleurocordyceps/Polycephalomycesclade revealed previously, another clade with newly added taxa
referred to as Polycephalomyces formosuslikefrom Japan was found to be sister to the Pleurocordyceps/
Polycephalomycesclade. Extensive investigation revealed that strains named P. formosuslikegrouped in this
new clade and do indeed represent the true P. formosus and that species previously included in the genus
Polycephalomyces required a new generic name. Based on the phylogenetic analyses and morphological
characteristics, including both sexual and asexual morphs when available, the new generic name Pleurocordyceps
is introduced and relevant new combinations are made. A newly designated lectotype and a supporting epitype
for P. formosus is selected and the circumscription of Polycephalomyces is discussed.
Key words: Clavicipitaceae, molecular systematics, new taxa, typication.
1 Introduction
When determining the systematic position of Paecilomyces
sinensis Q.T. Chen et al. (syn. Polycephalomyces sinensis (Q.T.
Chen et al.) W.J. Wang et al.), a new clade in the
clavicipitaceous fungi (including species referred to Cordy-
ceps s. lat.), the Polycephalomycesclade, was revealed
based on phylogenetic analyses of a multigene data set and
of ITS sequences, respectively. The clade comprised two
subgroups, I and II (Wang et al., 2012). In this paper, the
Polycephalomycesclade is now renamed the Pleuro-
cordyceps clade and temporally Pleurocordyceps/Polycepha-
lomycesclade. The existence of this new clade was
conrmed with new combinations of species being added
to the genus Polycephalomyces:P. kanzashianus (Kobayasi &
Shimizu) Kepler & Spatafora, P. nipponicus (Kobayasi) Kepler
& Spatafora and P. ramosopulvinatus (Kobayasi & Shimizu)
Kepler & Spatafora in subgroup I and P. cuboideus (Kobayasi
& Shimizu) Kepler & Spatafora, P. paracuboideus (S. Ban
et al.) Kepler & Spatafora, P. prolicus (Kobayasi) Kepler &
Spatafora, and P. ryogamiensis (Kobayasi & Shimizu) Kepler &
Spatafora in subgroup II (Kepler et al., 2013). Furthermore, a
new genus, Perennicordyceps, was proposed to accommo-
date those species in subgroup II (Matočec et al., 2014). Since
then, more new species have been discovered in subgroup I,
the genus Polycephalomyces:P. lianzhouensis W.M. Zhang &
L. Wang (Wang et al., 2014), P. yunnanensis Hong Yu bis et al.
(Wang et al., 2015a), P.agaricus Hong Yu bis & Y.B. Wang
(Wang et al., 2015b), P. onorei Kautman & Kautmanová
Month 2021
|
Volume 00
|
Issue 00
|
116 © 2020 Institute of Botany, Chinese Academy of Sciences
(Crous et al., 2017b), P. phaothaiensis Mongkols et al. (Crous
et al., 2017a), P. aurantiacus Y.P. Xiao et al., and P.
marginaliradians Y.P. Xiao et al. (Xiao et al., 2018). All these
species are listed in Table 1.
Although the two subgroups in the Pleurocordyceps/
Polycephalomycesclade have been separated into two
genera, Polycephalomyces and Perennicordyceps, and more
species have been described in the former, the clade remains
monophyletic. Some new species in Polycephalomyces were
described with both sexual and asexual morphs with the
support of molecular phylogeny, which provided strong links
between the two morphs (Wang et al., 2014; Crous
et al., 2017a; Xiao et al., 2018). The species in the two genera
are morphologically distinct. Those in Polycephalomyces are
characterized using a laterally expanded fertile part near to
the tip of stromata, and have immersed perithecia, bacilli-
form partascospores on discharge and two types of conidia
in culture. In contrast, the four species in Perennicordyceps
have the fertile part expanded equally and surrounding the
upper portion of the stromata, supercial perithecia,
ascospores disarticulating into cuboid to narrowly prismatic
partspores, and a single type of conidia in culture.
However, the two types of conidia in culture found in the
asexual morph of all the species currently classied in
Polycephalomyces are not those described in the type species
of the genus, P. formosus, which produces only one type of
conidia on the capitellum of synnemata (Kobayasi, 1941). To
clarify this issue, we conducted an intensive literature search,
a morphological comparison of living strains and molecular
phylogenetic analyses. This established that the generic
name Polycephalomyces was not applicable to most of the
fungi placed under the name. The type species, the only
species at the time of publication, is morphologically distinct
from them and they group in dierent clusters in
phylogenetic analyses. This subgroup I of taxa in the
Pleurocordyceps/Polycephalomycesclade therefore re-
quired a new generic name. Here we introduce a new
generic name and provide full descriptions and a discussion
of the generic circumscription.
The type specimen of P. formosus was collected from Prov.
Musasi, Mt. Takaosan, Japan (Kobayasi, 1941), but was
destroyed during World War II as mentioned by Seifert
(1985), who designated a neotype originally labeled
Cordyceps falcata B & B, Hakagata, Feb. 1923, Herb. T. Petch
Bequeathed 1949, latter relabeled Cordyceps falcata
Berk., Sri Lanka, Hakagata, Feb 1923, ex Herb. T. Petch, K(M)
187597for the species. Later an nrLSU sequence from a
strain of P. formosus, ARS Collection of Entomopathogenic
Fungal (ARSEF) 1424, was obtained by Bischoet al. (2003).
Since then, more gene fragments were sequenced from
ARSEF 1424 and widely used to represent Polycephalomyces
in phylogenetic analyses of the Cordyceps s. lat. group (e.g.,
Chaverri et al., 2005; Wang et al., 2012, 2014, 2015a, 2015b;
Kepler et al., 2013; Quandt et al., 2014; Sanjuan et al., 2015;
Ban, 2016; Crous et al., 2017a, 2017b; Xiao et al., 2018).
However, several strains representing Polycephalomyces
isolated from Japan were analyzed by Ban (2016) and two
species distinguished molecularly and morphologically were
revealed and named as P. formosuslike and P. ramosuslike.
Strikingly, strains of P. formosuslikewere found in a
distantly related clade from that of ARSEF 1424 in
phylogenetic analyses (Ban, 2016). It was therefore necessary
to clarify the true identity of the Pleurocordyceps/Poly-
cephalomycesclade. The nomenclature of Polycephalomyces
was investigated and strains of P. formosuslike isolated from
Japan were studied to provide necessary information for the
generic concept of Polycephalomyces.
2 Material and Methods
2.1 Fungal materials
Living cultures of Polycephalomyces formosuslike (NBRC 100686,
100687, 103843, 109993, 109994, and 109995) and P.ramosus
like (NBRC 101760, 109984, and 109985) strains reported in Ban
(2016) were obtained from the National Institute of Technology
and Evaluation Biological Resource Center (NBRC) in Japan. A
strain of P. fo rmosus (ARSEF 1424) was obtained from the USDA
ARS Collection of Entomopathogenic Fungal cultures (ARSEF) in
New York. All cultures were maintained at 4 °C on potato
dextrose agar (PDA) slants in the dark and incubated at
approximately 25 °C for 1420 days for this study.
The dried specimens constituting the neotype of P.
formosus,Cordyceps falcata Berk., Sri Lanka, Hakagata,
Feb 1923, ex Herb. T. Petch, K(M) 187597designated by
Seifert (1985) and the holotype of P. ramosus (Peck) Mains,
Stilbum ramosum, holotype, leg. C. H. Peck, USA, N.Y.,
Cayunga County, Sterling (NYS).were obtained on loan by
courtesy of the Fungarium of Royal Botanic Gardens, Kew (K
(M)) and the Herbarium of the New York State Museum
(NYS), respectively.
2.2 Culture and observation
Cultures were inoculated with a 1 cm diam. agar disk from a
colony of 7 cm diam. in a Petri dish and grown on PDA at
25 °C. Morphological examinations were performed every 25
days. For characterizing the strains, microscope slide cultures
were prepared using inoculating a small amount of mycelium
on a desired nutrient agar medium block of 1 cm
2
overlaid
using a coverslip of 2.2 cm as described in Wang et al. (2012).
Microscopic observations were carried out and photo-
graphed using a Zeiss Axioscope microscope equipped with
AxioCam MRc. Microscopic measurements were made using
AxioVision Rel. 4.6 software (Zeiss, Welwyn Garden City, UK).
Table 1 Species within the Polycephalomycesclade (Pleurocordyceps clade)
Subgroup I (Polycephalomyces) Subgroup II (Perennicordyceps)
Polycephalomycesclade
(Pleurocordyceps clade)
P. agaricus, P. aurantiacus, P. kanzashianu,
P. lianzhouensis, P. onorei, P. marginaliradians,
P. nipponicus, P. phaothaiensis, P. ramosopulvinatus,
P. sinensis, P. yunnanensis
P. cuboideus, P. paracuboideus,
P. prolicus, P. ryogamiensis
2 Wang et al.
J. Syst. Evol. 00 (0): 116, 2021 www.jse.ac.cn
2.3 DNA isolation, polymerase chain reaction (PCR)
amplication and sequencing
Fresh mycelia were harvested from strains grown on PDA at
25 °C for 14 days. Total genomic DNA was extracted using the
Fungi Genomic DNA Extraction Kit (Solarbio, Beijing, China),
and following the manufacturer's instructions. For dried
specimens, a method using Chelex100 (BioRad, Hercules,
CA, USA), which needs less material, was employed to
extract DNA, as described in Wang et al. (2012). Six nuclear
genes, including ITS, nrSSU, nrLSU, tef1, rpb1, and rpb2, were
amplied and sequenced. For the ITS region, primers ITS5
and ITS4 (White et al., 1990) were used and the PCR
amplication was conducted as described in Jiang & Yao
(2005). nrLSU and the nrSSU were amplied following the
PCR procedures of Sung et al. (2001) with primer pairs of
LR0R and LR5 (Vilgalys & Sun, 1994), and NS1 and NS4 (White
et al., 1990), respectively. tef1 was amplied with primers
983F and 2218R under the conditions of Rehner (2001).
Primers CRPB1A and RPB1Cr were employed for rpb1
amplication according to Castlebury et al. (2004). Ampli-
cation of rpb2 with primers fRPB25F and fRPB27cR was
carried out using the protocol in Wang et al. (2012). PCR
amplication was performed on a thermocycler (ProFlex
PCR System; Applied Biosystems, Foster City, CA, USA). The
25 μL PCR reactions contained 12.5 μL2×Taq MasterMix, 1 μL
each primer (10 μmol/L), 1 μL template DNA, and 9.5 μL
puried water.
DNA sequencing was carried out in both directions using
an automatic sequence analyzer from the Tsingke Biological
Technology (Beijing, China). The information and GenBank
accession numbers of taxa used in the ITS and multigene
phylogenetic analyses are provided in Tables S1 and S2,
respectively.
2.4 Phylogenetic analyses
In total, 163 sequences of nrSSU, nrLSU, tef1, rpb1, and rpb2
from species of Polycephalomyces and Perennicordyceps have
been submitted by various authors in recent years and were
retrieved from the GenBank database. Those sequences and
43 newly amplied sequences of nrSSU, nrLSU, tef1, rpb1, and
rpb2 from strains of P. formosuslike and P. ramosuslike
strains (see Table S2) were aligned to the multigene dataset
used by Sung et al. (2007b), Wang et al. (2012), Kepler et al.
(2013), and Quandt et al. (2014). Taxa from representative
families of Glomerellales, Glomerellaceae, and Plectosphaer-
ellaceae, were included as outgroups (see Table S2). In total,
61 ITS sequences, including 48 strains of Polycephalomyces
and Perennicordyceps and six of P. formosuslike, were
assembled. Five strains of Ophiocordyceps were chosen as
outgroups (see Table S1).
Sequences of ITS and the multigene dataset including
nrSSU, nrLSU, tef1, rpb1,andrpb2 were aligned and manually
edited using BioEdit Version 7.0.9.0 software (Hall, 1999).
The matrixes and trees of ITS and the multigene were
deposited in TreeBASE (http://purl.org/phylo/treebase/
phylows/study/TB2:S26846). Maximum likelihood (ML) anal-
yses were performed with RAxML7.0.3WIN using a GTR
GAMMA model for evolution (Stamatakis, 2006). Nodal
support was assessed with nonparametric bootstrapping
using 500 replicates. Bayesian analyses were run in the
MrBayes v3.1.2 program (Ronquist & Huelsenbeck, 2003) for
5×10
6
generations using two independent runs with four
chains until the average standard deviation of the split
frequencies between the simultaneous runs was below 0.01
and the loglikelihood had reached stationary. A general
time reversible (GTR) model of DNA substitution with
gammadistributed rate variation across invariant sites as
determined by MrModeltest version 2.2 (Nylander, 2004)
was used for the multigene analyses, while the default F81
model was used for the ITS analyses. Trees were sampled
every 100 generations. The rst 12 500 trees were discarded
from further analyses and the remaining ones used for
calculating posterior probabilities (PP) in the majorityrule
consensustree.Treesweregured in FigTree v1.4.3
(Rambaut, 2014). Bootstrap proportions higher than 70%
of ML analyses (MLBP) and posterior probabilities of
Bayesian analyses (BIPP) greater than 95% are shown in
the phylogenetic trees.
3 Results
3.1 Morphological observations
Morphological observations were carried out on both
cultures and dried specimens.
3.1.1 Observation on living cultures
The morphological characteristics of the living cultures including
culture colony, hyphae, synnemata and conidial masses, and
microscopic characters of phialides and conidia for Polycepha-
lomyces formosus ARSEF 1424, P. ram osuslike and P. formosus
like strains were observed and compared (Table 2). The
synnemata of P. for mosus ARSEF 1424 and P. ramosus like
strains were almost simple and unbranched while those of P.
formosuslike NBRC 109993 were often branched. In Petri dish
culture, two types of phialides and conidia were observed in P.
formosus ARSEF 1424 and P. ramosus like NBRC 109985: α
phialides of the acremoniumtype producing subglobose to
ovoid αconidia at the terminal portion of the synnemata and
also at the edge of the colony, and βphialides of the hirsutella
type producing fusiform βconidia on the stipe of the
synnemata and also mycelium surface of the colony.
Conversely, αconidia were observed at the terminal portion
of synnemata from the P. formosuslike strains but no βconidia
were found on the stipe of the synnemata from the Petri dish
cultures. However, in slide cultures, both P. formosus ARSEF
1424 and P. ramosus like strains produced fusiform βconidia
ofteninchainsonphialides,whilethoseofP. form osuslike
strains produced ovoid, oblong ellipsoidal to cylindric conidia,
often forming spore balls on the phialide.
Detailed descriptions of each strain are provided below.
Polycephalomyces formosus ARSEF 1424 Colonies growing
fairly well on PDA in Petri dish cultures, attaining 1.2 cm
diameter in 10 days at 25 °C, short occose and white,
reverse reddish brown. Hyphae hyaline, branched,
smoothwalled, 1.04.5 μm wide. Synnemata arising after
13 days on PDA; 115 mm long, clavate, pale yellow;
radiating with a ringlike distribution (Fig. 1). Conidial
mass opaque, slimy, yelloworange, generated from the
apex of the synnema or on the surface of the colony
(Fig. 1). αPhialides verticillate and acropleurogenous on
conidiophores; cylindrical to subulate at the base,
3A new genus of Pleurocordyceps
J. Syst. Evol. 00 (0): 116, 2021www.jse.ac.cn
tapering gradually from the base to the apex; 6.571 µm
long, 0.81.5 µm wide at the base and 0.71.1 µm wide at
the apex. αConidia subglobose to ovoid,
1.52.7 ×1.22.0 µm, formed in viscous pools located on
the agar and at the terminal portion of synnemata
forming conidial masses. βphialides acropleurogenous,
solitary on the hyphae, with swollen bases, tapering
abruptly from the base to the apex; 9.048 μmlong,
1.32.5 μmwideatthebaseand0.51.2 μmwideatthe
apex. βconidia fusiform, 3.54.5 (6.0) ×1.22.5 (3.5)
µm, produced by phialides on the stipe of the synnema
and mycelium surface of the colony, single or often in
chains on the phialides, sometimes aggregated to form
irregular spore balls (Fig. 1).
Polycephalomyces ramosuslike Colonies on PDA in Petri
dish culture attaining a diameter of 1.01.6 cm in
10 days at 25 °C, cottony, white to orangeyellow, and reverse
dry yellow. Hyphae hyaline, septate, branched, smooth
walled, 0.75.0 μm wide. Synnemata solitary, clavate,
unbranched 26 mm long. Conidial mass cream arising from
the apex of the synnemata or covering the surface of the
colony (Fig. 2). αPhialides verticillate and acropleurogenous,
in whorls of 13 on conidiophores, cylindrical to subulate at
the base, or occurring directly on the aerial hyphae;
7.059 μm long, 1.22.2 μm wide at the base and 0.51.1 μm
wide at the apex. αConidia subglobose or ellipsoidal,
1.52.5 ×1.22.5 μm, produced on the edge of the colony. β
Phialides acropleurogenous, solitary, with swollen bases,
terminal phialides tapering abruptly, 8.741 μm long,
1.52.6 μm wide at the base and 0.71.1 μm wide at the
apex. βConidia fusiform 3.56.5 ×1.23.0 μm, produced on
the mycelium surface of the colony, single or often in chains
on phialides (Fig. 2).
Polycephalomyces formosuslike Colonies on PDA in Petri
dish cultures growing slowly, attaining 1.0 cm diameter in 10
days at 25 °C, dense, white, and reverse white or dull bu.
Hyphae hyaline, branched, smoothwalled, 0.75.0 μmwide.
Synnemataemergingafter20days,formingtwotothree
branches, 0.530 mm long, arising as several radiating rings
on the colony (Fig. 3). Conidial masses pale yellow, arising
from the apex of synnemata or covering the surface of the
colony (Fig. 3). Phialides developing from the colony and
the terminal parts of synnemata; cylindrical to subulate at
the base; 5.575 μm long, tapering gradually from
0.91.8 μmatthebaseto0.81.5 μm at the apex. Conidia
of one type, onecelled, smoothwalled, ellipsoid to ovoid,
2.03.5 ×1.01.5 μm, arising in a conidial mass on the agar or
on the terminal portions of synnemata (Fig. 3). Conidia
absent from the stipes of synnemata. In slide culture,
phialides monothetic and solitary or acropleurogenous in
whorls of 14, narrowly lageniform or subulate, 7.051 μm
long, 1.02.5 μmwideatthebaseand0.51.0 μmwideat
the apex. Conidia obovoid to oblong ellipsoidal or
cylindrical, 2.06.0 ×1.21.8 μm; forming irregular spore
balls near the apex of phialides (Fig. 3).
3.1.2 Observations on the type material of Polycephalomyces
formosus and P. ramosus
Neotype of Polycephalomyces formosus The neotype
comprised two dried specimens, which were white and
broken into several fragments. Under the microscope, a
few conidia were observed, ellipsoidal, and measuring
1.53.5 ×11.5 μm (Fig. 4).
Holotype of Polycephalomyces ramosus The holotype on
loan from NYS consisted of a single microscopic slide,
mounted in an unknown medium and a tiny piece of
sample specied for DNA work. Examination of the slide
showed no discernible fungal structures under the micro-
scope (Fig. 5).
Table 2 Morphological comparison of species of Polycephalomyces formosus ARSEF 1424, P. ramosuslike and P. formosuslike
Species Colony Synnemata (mm) Phialides (µm) Conidia (µm)
P. formosus
ARSEF 1424
Colony short
occose and
white, reverse
reddish brown.
Synnemata arising after
13 days, 115 long,
radiating with a ring
like distribution.
Conidial mass opaque,
slimy, yelloworange.
αPhialides 6.571 long,
0.81.4 wide at the base
and 0.71.1 wide at the
apex. βPhialides
9.047.9 long, 1.32.5
wide at the base and
0.51.2 wide at the apex.
αConidia subglobose to
ovoid, 1.52.7 ×1.22.0.
βConidia fusiform,
3.54.6 (6.1)
×1.22.5 (3.5).
P. ramosuslike Colony cottony,
white to orange
yellow, reverse dry
yellow.
Synnemata solitary,
clavate, unbranched
26 long. Conidial mass
cream.
αPhialides 7.259 long,
1.22.2 wide at the base
and 0.51.1 wide at the
apex. βPhialides
8.740.8 long, 1.52.6
wide at the base and
0.71.1 wide at the apex.
αConidia subglobose or
ellipsoidal,
1.52.5 ×1.22.2.
βConidia fusiform,
3.56.2 ×1.23.0.
P. formosuslike Colony dense, white,
and reverse white
or dull bu.
Synnemata emerging
after 20 days, 0.530
long, showing several
radiating ringlike
distributions. Conidial
masses pale yellow.
Phialides 5.575 long,
tapering gradually from
0.91.8 at the base to
0.81.4 at the apex.
Conidia ellipsoidal, ovoid,
2.03.4 ×1.01.5.
4 Wang et al.
J. Syst. Evol. 00 (0): 116, 2021 www.jse.ac.cn
3.2 Phylogenetic analyses
Amplication and sequencing of dried specimen DNA
extraction, amplication and sequencing of the neotypeof
P. formosu s and the holotype of P. ra mosus were performed with
a minute scraps of material. Amplication of the ITS sequence
failed for the neotype of P. formosus,butforP. r amosus resulted
in a sequence with a 97.60% similarity to accession KJ412030 in
GenBank named as Malassezia restricta strain ITC521C.
Data sets The combined multigene data set with 187
taxa consisted of 4181 base pairs (nrSSU 998 bp, nrLSU
832 bp, tef1 898 bp, rpb1 559 bp, rpb2 894 bp) after the
exclusion of ambiguously aligned sites. In total,107 taxa
were complete for all the ve gene sequences, 40 taxa were
complete for four genes, and 28 for three genes (Table S2).
The numbers of taxa for each gene were: nrSSU 159 taxa,
nrLSU 179, tef1 170, rpb1 158, and rpb2 135 (Table S2). ML
Fig. 1. Polycephalomyces formosus(ARSEF 1424). A, Obverse colony side on potato dextrose agar (PDA). B, Reverse colony
side on PDA. C, Synnemata growing on PDA medium. D,αPhialides from a conidial mass. E, Phialides and conidia. F,
βPhialides. G,αConidia from conidia mass on synnemata. H,βConidia. Scale bars: A, B =2 cm, C =500 μm, D, FH=10 μm,
E=20 μm.
5A new genus of Pleurocordyceps
J. Syst. Evol. 00 (0): 116, 2021www.jse.ac.cn
analyses produced a tree with a loglikelihood (ln) of
89294.064046. Bayesian analyses revealed that the triple
repeated analyses converged on a stationary phase and the
50% majorityrule consensus trees were topologically
identical. The tree topology produced in the ML and
Bayesian analyses was very similar and the Bayesian
consensus tree is provided in Fig. 6 with the BP values of
ML analyses and the PP values from one of the Bayesian
analyses cited as nodal support.
The ITS sequence data matrix included 520 nucleotide
characters after the exclusion of ambiguous sites
at both ends. ML analyses produced a tree with a log
likelihood (ln) of 3352.132305. In the Bayesian analyses,
all three repeated analyses converged on a stationary
Fig. 2. Polycephalomyces ramosuslike (NBRC 109985). A, Obverse colony side on potato dextrose agar (PDA). B, Reverse
colony side on PDA. C, Synnemata growing on PDA medium. D,αPhialides from a conidial mass. E, Phialides and conidia. F,
βPhialides. G,αConidia from conidia mass on synnemata. H,βconidia. Scale bars: A, B =2 cm, C =1 mm, D, FH=10 μm,
E=20 μm.
6 Wang et al.
J. Syst. Evol. 00 (0): 116, 2021 www.jse.ac.cn
phaseandthethree50%majorityrule consensus trees
were topologically identical. There was no signicant
dierence in the tree topology produced using ML and
Bayesian analyses. The Bayesian consensus tree is
provided here with BP values of ML analyses and PP
values from one of the Bayesian analyses (Fig. 7).
Phylogeny Eight major clades representing currently
accepted families within the Hypocreales were recognized
from the multigene analyses. These clades include Bionec-
triaceae, Clavicipitaceae, Cordycipitaceae, Hypocreaceae, Nec-
triaceae, and Ophiocordycipitaceae as recognized by Sung
et al. (2007a, 2007b), the Pleurocordyceps/Polycephalo-
mycesclade proposed by Wang et al. (2012), and the P.
formosuslike clade revealed in our new study (Fig. 6). The
latter two clades could be viewed as possible family rank
clades. Six major clades, Bionectriaceae, Cordycipitaceae,
Hypocreaceae, Nectriaceae, Ophiocordycipitacea, and Pleuro-
cordyceps/Polycephalomyces, received support of 100% PP
Fig. 3. Polycephalomyces formosuslike (CGMCC 5.2206 epitype). A, Obverse colony side on potato dextrose agar (PDA). B,
Reverse colony side on PDA. C, Synnemata growing on PDA medium. D,αPhialides from a conidial mass. E,F, Phialides and
conidia. G, Irregular conidia balls. H, Conidia from conidia mass on synnemata. Scale bars: A, B =2 cm, C =500 μm, D, G,
H=10 μm, E, F =20 μm.
7A new genus of Pleurocordyceps
J. Syst. Evol. 00 (0): 116, 2021www.jse.ac.cn
in the Bayesian analyses, and the two clades of Clavicipita-
ceae and P. formosuslike received 99% support. Most clades
had support of 100% BP in ML analyses except for that of
Clavicipitaceae (99%) and Nectriaceae (97%). Two species, P.
formosuslike and Cordyceps pleuricapitata, formed a new
monophyletic clade with strong support in our Bayesian
analyses and ML (PP =99%, MLBP =100%). Among the eight
clades, only the group formed by Ophiocordycipitaceae, P.
formosuslike, and Pleurocordyceps/Polycephalomyces
clades and its extended group forming the Clavicipitaceae
clade were supported by 100% PP in Bayesian analyses, but
<100% for the other groups. Both the Pleurocordyceps/
Polycephalomycesand P. formosuslike clades were further
divided into two subclades; Pleurocordyceps/Polycephalo-
myces(subclade I in Wang et al., 2012) and Perennicordyceps
(subclade II in Wang et al., 2012) for the former, and
subclades P. formosuslike and Cordyceps pleuricapitata for
the latter (Fig. 6). These subclades all received strong
support in the ML and Bayesian analyses.
In addition to the taxa in the Pleurocordyceps/Polycephalo-
mycescladeofthemultigenedataset,twotaxa,P. onorei and
P.sp.BRACR23906,wereincludedintheITSdataset.The
topology of the ITS phylogenetic tree is similar to that of the
Pleurocordyceps/Polycephalomycessubclade in the multigene
tree (Fig. 7). Most of the species were clearly separated in the
tree, but P. lianz houensis and P. ramos op ulvinatus were very
closely related. Based on both the ITS and multigene
phylogenetic analyses, these two species were considered as
distinct species. Therefore, 10 species can be recognized in the
Pleurocordyceps/Polycephalomycessubclade, that is, P. si -
nensis, P. lianzhouensis, P. ramosopulvinatus, P. yunnanensis, P.
aurantiacus, P. marginaliradians, P. phaothaiensis, P. nipponicus,
P. onorei,andP. agaricus.
3.3 Taxonomy
The new clade, the Polycephalomyces formosuslike clade,
revealed in this study posed a taxonomic question on the
generic name to be used for the species included in
subclade I of the Pleurocordyceps/Polycephalomycesclade
(Fig. 7). Based on our morphological observations and
molecular analyses, the two clades, the P. fo rmosuslike
clade and the Pleurocordyceps/Polycephalomycesclade,
represented two distinct groups of fungi both morpholog-
Fig. 4. The material proposed as a neotypeof Polycephalomyces formosus by Seifert (1985). A,B, The loan of the neotype of
P. formosus.C,D, Conidia. Scale bars: A, B =2 cm, C, D =10 μm.
Fig. 5. Polycephalomyces ramosus (holotype).
8 Wang et al.
J. Syst. Evol. 00 (0): 116, 2021 www.jse.ac.cn
ically and molecularly. Separation in well resolved clades in
the phylogenetic analyses was supported by spore
production along the stipes of synnemata and the conidial
types, especially in culture. No conidia were formed on the
stipes of synnemata and only one conidial type was
produced on the capitate terminus of the synnemata in P.
formosus as reported by Kobayasi (1941) and conrmed by
Seifert (1985) and also in cultures of P. formos uslike strains
Fig. 6. Phylogenetic tree from maximum likelihood (ML) and Bayesian analyses (BI) analyses of multigene (nrSSU, nrLSU, tef1,
rpb1 and rpb2) data set showing the relationships within Hypocreales. Bootstrap proportions (equal to or above 70%) of ML
analyses (MLBP) and posterior probabilities (PP) (equal to or above 95%) are shown above internodes before and after
backslash, respectively. The names of taxa (e.g., clades, families) are provided to the right of species names.
9A new genus of Pleurocordyceps
J. Syst. Evol. 00 (0): 116, 2021www.jse.ac.cn
as reported by Ban (2016) and conrmed in this study. The
production of a single conidial type in Petri dish cultures
reported by Ban (2016) for strains of P. formosuslike was also
conrmed by us. In contrast, two types of conidia were found
in cultures in all the species previously assigned to
Polycephalomyces except for P. lianzhouensis, but the type of
conidia was not clearly described previously. There was only
one conidial type in a few species of Polycephalomyces found
in the wild, because of their structural features, for example,
P. aurantiacus (conidia oval to globose; Xiao et al., 2018) and P.
marginaliradians (conidia fusiform; Xiao et al., 2018), but two
types of conidia were later found to be produced in Petri dish
cultures (Xiao et al., 2018). Although a number of species have
been transferred to, and new species described in, Poly-
cephalomyces, it is apparently a misapplied generic name to
the group of fungi which produce two types of conidia in Petri
dish cultures. Therefore, we introduce a new generic name for
this group of fungi.
Pleurocordyceps Y.J. Yao, Y.H. Wang, S. Ban, W.J. Wang, Yi
Li, Ke Wang & P.M. Kirk, gen. nov.
Fungal Names FN570683
Diagnosis: Species in this new genus dier from
Perennicordyceps and Polycephalomyces formosuslike fungi
(Polycephalomyces s. str.) in producing lateral fertile
pulvinate stromata close to the tip in the sexual morph
and two types of conidia in Petri dish culture in the asexual
morph.
Type:Paecilomyces sinensis Q.T. Chen et al. (syn. Pleuro-
cordyceps sinensis (Q.T. Chen et al.) Y.J. Yao et al. see below).
Etymology:Pleuro(Gk), lateral, in a sideways position;
referring to the fertile part with perithecia formed laterally
on stromata of the cordycepitoid sexual morph.
Hosts: Entomogenous and/or fungicolous.
Distribution: China, Ecuador, Japan, Thailand.
Description:Sexual morph:Stromata singular to numerous,
simple, eshy, cylindrical, reddish brown, growing upwards
Fig. 7. Phylogeny of the Pleurocordyceps/Polycephalomycesand P. formosuslike clades from maximum likelihood (ML) and
Bayesian analyses (BI) analyses using ITS sequences. Bootstrap proportions (equal to or above 70%) of ML analyses (MLBP)
and posterior probabilities (PP) (equal to or above 95%) are shown above internodes before and after backslash, respectively.
The names of taxa are provided to the right of species names.
10 Wang et al.
J. Syst. Evol. 00 (0): 116, 2021 www.jse.ac.cn
from the head or irregularly in various directions from the
whole body of the host; simple or branched. Stipes
cylindrical, tip pointed, perithecia forming laterally pad on
the stipe and often toward the apical parts of the stroma,
subterminal, sometimes appearing terminal when mature;
sterile tip curved or twisted, some missing when mature.
Perithecia pyriform and/or ovoid, with protruding ostioles,
immersed when young, emerged and separate when mature.
Asci cylindrical, wall thickened at the apex. Ascospores
hyaline, liform, cylindrical, fragmenting to form small
truncate, bacilliform partspores.
Asexual morph:Colonies growing relatively well in culture.
Synnemata solitary to caespitose or crowded, unbranched or
rarely branched, arising from an insect corpse, other fungus
stroma, or in culture; stipes of the synnemata tomentose,
clavate or spatulate or/and cylindrical; a viscous spore mass
produced mostly on the terminal portions of the synnemata,
rarely in the median part of the synnemata and then
surrounding the stipe; some species produce unformed,
scablike aggregate conidial structure on the tawny stipe.
Conidiogenous cells phialides, of two types; αphialides
verticillate and acropleurogenous on conidiophores, cylin-
drical to subulate at the base or occurring directly on the
aerial hyphae; βphialides acropleurogenous and solitary on
the hyphae, narrow lageniform or subulate, tapering abruptly
from the base to the apex. Conidia onecelled, hyaline and
smoothwalled, of two types in culture; αconidia globose to
subglobose or ellipsoidal, in viscous pools located on the
colony in culture and at the terminal portion or occasionally
in the middle of the stipe of synnemata forming a conidial
mass; βconidia fusiform, produced along stipe of the
synnemata as well as on the mycelium surface of the colony,
single or often in chains on phialides.
Remarks:Polycephalomyces was rst described as an
asexually typied genus (Kobayasi, 1941) and further species
with only asexual morphs were included in the genus, mostly
through combinations from other genera. The sexual morph
was not reported when the Pleurocordyceps/Polycephalo-
mycesclade was revealed (Wang et al., 2012). Since then,
more species were included in Polycephalomyces and several
species with sexual morphs were combined with the genus
by Kepler et al. (2013). However, some of the species with
sexual morphs were latter removed from Polycephalomyces,
for example, the four species of Perennicordyceps (Matočec
et al., 2014). Subsequently, more species were newly
described in Polycephalomyces including some with sexual
morphs, that is P. lianzhouensis, P. onorei, P. phaothaiensis,
and P. marginaliradians (Wang et al., 2014; Crous
et al., 2017a, 2017b; Xiao et al., 2018). Currently, the two
genera within the Pleurocordyceps/Polycephalomycesclade,
representing subclades I and II, are Pleurocordyceps and
Perennicordyceps. These were well separated in the
phylogenetic analyses (Figs. 6 and 7) and also morpholog-
ically distinguished in both the sexual and asexual morphs,
for example, formation of fertile part and perithecia, shape
of partspores, and types of conidia as summarized above.
As the circumscription of the generic names has changed,
new combinations of species originally placed in Polycepha-
lomyces into Pleurocordyceps are made below, based on an
examination of type or other information in the protologue.
All these have the unambiguous sexual morph and/or the
two types of conidia, especially in culture, and are supported
by molecular data; that is, species that display the consistent
characters of Pleurocordyceps, as circumscribed here. Note
that because of the lack of taxonomic evidence, some
species placed in Polycephalomyces remain as a residue
pending further investigation.
Pleurocordyceps sinensis (Q.T. Chen et al.) Y.J. Yao, Y.H.
Wang, S. Ban, W.J. Wang, Yi Li, Ke Wang & P.M. Kirk,
comb. nov.
Fungal Names FN570676
Basionym:Paecilomyces sinensis Q.T. Chen et al., Acta
Mycol. Sin. 3: 25 (1984).
Synonym:Polycephalomyces sinensis (Q.T. Chen et al.) W.J.
Wang et al., Syst. Biodiv. 10(2): 228 (2012).
Type: China, Sichuan Province, Kangding County, on larva
of Hepialus armocanus (Lepidoptera), 1980, HMAS 43720.
Pleurocordyceps sinensis grouped in a terminal clade with
other sequences, including Polycephalomyces formosus
ARSEF 1424, P. ramosus NBRC 109983, and P. tomentosus
BL 4 (Figs. 6 and 7).
The strain P. formosus ARSEF 1424 from Poland, reported
by Bischoet al. (2003), has been widely used to represent
that species (e.g., Chaverri et al., 2005; Wang
et al., 2012, 2014, 2015a, 2015b; Kepler et al., 2013;
Quandt et al., 2014; Sanjuan et al., 2015; Ban, 2016; Crous
et al., 2017a, 2017b; Xiao et al., 2018). Morphological
observationonthisstrain,however, demonstrated that
two types of conidia (αand βconidia) were produced and
were unlike the true P. formosus,whichisdescribedas
producing onetypeofconidiabyconidialmassatthe
apex of the synnemata(Kobayasi, 1941). However, P.
formosuslike strains, collected from Japan were much
closer to the type location, Prov. Musasi, Mt. Takaosan,
than that of the neotype from Sri Lanka designated by
Seifert (1985), and displayed the same characters as
described by Kobayasi (1941) (Ban, 2016; this study).
Furthermore, strains ARSEF 1424 and P. fo rmosu slike,
clustered in distantly related clades (Ban, 2016; this study).
These are therefore dierent species and P. formo suslike
matches much more closely with the original concept of P.
formosus than ARSEF 1424, which we regard as incorrectly
identied.
Polycephalomyces ramosus (Peck) Mains (syn. Stilbum
ramosum Peck; Mains, 1948), was originally described as
head subglobose whitish or pale yellow; stem thick, smooth,
branched, white above, pallid or brownish below, sometimes
creeping and sending up branches at intervals; spores minute,
oblong(Peck, 1873) and the conidia are hyaline, ellipsoidal to
obovoid, 2.23.3 ×1.11.5 μm and are covered by a mucus. They
are produced singly on subulate phialides which are 1530 μm
long and up to 1.5 μmwideatthebasebased on the collection
by Mains (1948). Later, Seifert (1985) provided a description of
P.ramosus as Phialides of two types, Aphialides in capitulum,
Bphialides on stipe, producing Aand Bconidia respectively.
Aconidia obovoid to broadly obpyriform, 23×12μm.
Bconidia fusiform, catenate, 34.5 ×1.52μmwith no
indication if it was based on the cited holotype material.
Polycephalomyces ramosus from Croatia was also reported with
two types of conidia (Matočec et al., 2014). Furthermore, two
strains named as P. ram osus, NBRC 100693 and NBRC 109983,
11A new genus of Pleurocordyceps
J. Syst. Evol. 00 (0): 116, 2021www.jse.ac.cn
with two types of conidia were cited by Ban (2016) and the
latter was accepted by Crous et al. (2017b) and Xiao et al.
(2018). Our microscopic examination of the slide from the
holotype of P. ra mo sus did not reveal any conidia. However, the
ITSsequenceobtainedinthisstudyfromtheholotypeofP.
ramosus was similar to that of KJ412030 in GenBank, close to a
sequence labeled as Malassezia restricta E. Guého et al. Due to
the lack of sucient information on the application of the
name, the identity of P. ramosus requires further investigation.
Polycephalomyces tomentosus (Schrad.) Seifert (syn.
Stilbum tomentosum Schrad.) was excluded from Stilbum
by Sutton (1973) by recognizing a new genus, Blistum B.
Sutton. The rst named strain of P. tomentosus in
phylogenetic analyses was obtained by Bischoet al.
(2003) and considered to be Blistum, based on the 28S
rDNA phylogenetic analyses and its myxomyceticolous
habit(Bischoet al., 2003; Wang et al., 2012). Later,
another strain of P. tomentosus, BL 4, was introduced in
phylogenetical analyses by Kepler et al. (2013) and since then
it has been accepted in Quandt et al. (2014), Wang et al.
(2015a), Crous et al. (2017a, 2017b), and Xiao et al. (2018).
However, there was not sucient evidence to be clear on
the species identity of P. tomentosus BL 4 as the papers
mentioning it lacked morphological and ecological informa-
tion. As P. tomentosus was described as a parasite of slime
molds (Mycetozoa), we suspect it is probably not related to
the entomopathogenic fungi treated here.
Based on an analysis of all the names included in this
terminal clade, Polycephalomycesformosus,P.ramosus,P.
tomentosus and P. sinensis, the latter have been clearly
circumscribed both morphologically and molecularly by
Wang et al. (2012). Therefore, Polycephalomyces sinensis is
combined into Pleurocordyceps to typify this terminal
clade.
Pleurocordyceps agarica (Hong Yu bis & Y.B. Wang) Y.H.
Wang, S. Ban, W.J. Wang, Yi Li, Ke Wang, P.M. Kirk & Y.J. Yao,
comb. nov.
Fungal Names FN570677
Basionym:Polycephalomyces agaricus Hong Yu bis & Y.B.
Wang Mycol. Progr. 14 (No. 70): 4 (2015).
Type: China, Yunnan Province, Song ming County, Dashao
village, on the stroma of Ophiocordyceps sp. associated with
the melolonthid larva buried in the soil, 8 Aug. 2013, YHH
PA1305.
Pleurocordyceps aurantiaca (Y.P. Xiao et al.) Y.H. Wang, S.
Ban, W.J. Wang, Yi Li, Ke Wang, P.M. Kirk & Y.J. Yao,
comb. nov.
Fungal Names FN 570678
Basionym:Polycephalomyces aurantiacus Y.P. Xiao et al.,
Scientic Reports 8 (No. 18087): 2 (2018).
Type: Thailand, Prachuap Khiri Khan, on dead larvae
(Coleopteran), 29 Jul. 2015, MFLU 171393.
Pleurocordyceps lianzhouensis (W.M. Zhang & L. Wang)
Y.H. Wang, S. Ban, W.J. Wang, Yi Li, Ke Wang, P.M. Kirk & Y.J.
Yao, comb. nov.
Fungal Names FN570679
Basionym:Polycephalomyces lianzhouensis W.M. Zhang & L.
Wang, Mycol. Progr. 13: 1093 (2014).
Type: China, Guangdong, Lianzhou, Dadongshan Nature
Reserve, on a Lepidoptera larva in fallen leaves, 18 Apr. 2002,
GDGM 20918.
The original description of Polycephalomyces lianz-
houensis followed the style of Kobayasi (1982) and Seifert
(1985) with photographs of synnemata growing on rice
medium, but the conidial types were unclear (Wang
et al., 2014), with only one type of conidia based on a
scanning electron micrograph. Nevertheless, based on
the sexual morph characters and our phylogenetic
analyses, this taxon belongs in the new genus.
Pleurocordyceps marginaliradians (Y.P. Xiao et al.) Y.H.
Wang, S. Ban, W.J. Wang, Yi Li, Ke Wang, P.M. Kirk & Y.J. Yao,
comb. nov.
Fungal Names FN570674
Basionym:Polycephalomyces marginaliradians Y.P. Xiao
et al., Scientic Reports 8 (No. 18087): 4 (2018).
Type: Thailand, Chiang Mai, The Mushroom Research
Center, on dead Cossidae larvae (Lepidoptera), 11 Jun. 2017,
MFLU 171582.
Pleurocordyceps nipponica (Kobayasi) Y.H. Wang, S. Ban,
W.J. Wang, Yi Li, Ke Wang, P.M. Kirk & Y.J. Yao, comb. nov.
Fungal Names FN570680
Basionym:Cordyceps nipponica Kobayasi, Bull. Biogeogr.
Soc. Jap. 9: 151 (1939).
Synonym:Polycephalomyces nipponicus (Kobayasi) Kepler
& Spatafora, Fungal Biology 117: 618 (2013).
Type: Japan, Prov. Owari. Nisikasngaigun. Sinkawamati,
on Graptopsaltria nigrofuscata (Hemiptera), Jul. 1936, A.
Hayakawa, Type in Kobayasi Herb.
This species is combined into the new genus based on
characters of the sexual morph as illustrated in Kobayasi (1939)
and Shimizu (1994), displaying the typical fertile pads formed
laterally near to the top of the stromata. The two types of
conidia characteristically produced in the asexual morph have
recently been reported by Ban et al. (2020, unpublished data).
OnesequenceunderthenamePolycephalomyces
kanzashianus (GenBank Accession: AB027371, submitted
by Nikoh & Fukatsu, 2000) is included in the Pleuro-
cordyceps nipponica clade (Fig. 6). Based on the
characters of their sexual morph, they appear to be
dierent species (cf. Shimizu, 1994, gs. 35 and 37). The
sexual and asexual morphs of P. nippo ni cus (Shimizu,
1994;Ban,2016)areinaccordwiththecircumscriptionof
Pleurocordyceps and the new combination is therefore
made here. If Polycephalomyces kanzashinatus later
proves to be conspecicwithPleurocordyceps nipponica,
the new combination would stand because of the priority
of publication of the epithets.
Pleurocordyceps onorei (Kautman & Crous) Y.H. Wang, S.
Ban, W.J. Wang, Yi Li, Ke Wang, P.M. Kirk & Y.J. Yao,
comb. nov.
Fungal Names FN570675
Basionym:Polycephalomyces onorei Kautman & Crous,
Persoonia 38: 367 (2017).
Type: Ecuador, Cotopaxi Province, Union de Toachi village,
on caterpillar of Lepidoptera (cf. Arctinae), on stem of
Etlingera sp., 27 Mar. 2011, BRA CR23902.
12 Wang et al.
J. Syst. Evol. 00 (0): 116, 2021 www.jse.ac.cn
Pleurocordyceps phaothaiensis (Mongkols. et al.) Y.H.
Wang, S. Ban, W.J. Wang, Yi Li, Ke Wang, P.M. Kirk & Y.J.
Yao, comb. nov.
Fungal Names FN570684
Basionym:Polycephalomyces phaothaiensis Mongkols et al.,
Persoonia 39: 327 (2017).
Type: Thailand, Phitsanulok Province, Noen Maprang district,
on Coleoptera larva, buried in soil, 27 Jun. 2017, BBH42883.
Pleurocordyceps ramosopulvinata (Kobayasi & Shimizu)
Y.H. Wang, S. Ban, W.J. Wang, Yi Li, Ke Wang, P.M. Kirk & Y.J.
Yao, comb. nov.
Fungal Names FN570682
Basionym:Cordyceps ramosopulvinata Kobayasi & Shimizu,
Bull. natn. Sci. Mus., Tokyo, B 9(1): 2 (1983).
Synonym:Polycephalomyces ramosopulvinatus (Kobayasi &
Shimizu) Kepler & Spatafora, Fungal Biology 117: 618 (2013).
Type: Japan, Yamagata Pref. Isl. Tobishima, on nymph of
Cicadidae (Hemiptera), 19 Aug. 1980, TY 141.
The combination of the species in Polycephalomyces known to
have sexual morphs was mainly based on DNA sequence
analyses (Kepler et al., 2013). As in the case of P. nipponicus,this
requires further morphological support. Both these species are
accepted as members of Pleurocordyceps based on the
characteristics of the fertile pads formed near to the top of
the stromata, as illustrated by Kobayasi (1939) and Kobayasi &
Shimizu (1983) as well as by the DNA data. These characteristics
of the fertile structures are similar to that of these newly
described species with sexual morphs described here despite a
signicant dierence in the size of stromata and fertile pads.
Pleurocordyceps yunnanensis (Hong Yu bis et al.) Y.H.
Wang, S. Ban, W.J. Wang, Yi Li, Ke Wang, P.M. Kirk & Y.J. Yao,
comb. nov.
Fungal Names FN570681
Basionym:Polycephalomyces yunnanensis Hong Yu bis
et al., Phytotaxa 208: 39 (2014).
Type: China, Yunnan Province, Kunming, the Wild Duck
Lake Forest Park, on the stroma of Ophiocordyceps nutans on
the ground, 28 Jul. 2010, YHH PY1006.
In the phylogenetic analyses (Figs. 6 and 7), sequences
from this species clustered with those from strains named P.
ramosuslike by Ban (2016). The name P. yunnanensis used for
this terminal clade is selected because the identity of P.
ramosus required clarication (this study). However, if the P.
ramosuslike strains proved to be identical to the type of P.
ramosus, that name would have priority over P. yunnanensis.
Key to accepted species of the genus Pleurocordyceps
In order to facilitate species identication, a key to the
species recognized in Pleurocordyceps is provided here based
on morphological and ecological characters. Note that the
asexual morph is generally seen in culture.
1a. Ascomata present ……………………………………….. 2
1b. Ascomata absent ………………………………………… 7
2a. Growing on nymph of Cicadidae ……………………….. 3
2b. Growing on other hosts or substrates ………………… 4
3a. Perithecia partly immersed, 750925 ×275300 μm
………………………………………… P. ramosopulvinata
3b. Perithecia immersed, 800950 ×300370 μm…………
………………………………………………… P. nipponica
4a. Perithecia (900) 9501067(1100) ×(350)352429
(450) µm; only known from Coleoptera larvae
.……………………………………………P. phaothaiensis
4b. Perithecia shorter than 950 μm; only known from
Lepidoptera larvae .…………………………………....5
5a. Perithecia 355473 ×158197 μm; Asci 89194 ×2.0
4.0 μm……………………………………... P. lianzhouensi s
5b. Perithecia longer than 500 μm; Asci longer than
200 μm………………………………………………….6
6a. Perithecia 676803 ×246328 μm; Asci 459556 ×
3.04.5 μm; Ascospores easily breaking into cylindrical
partspores…………………….…….. P. marginaliradians
6b. Perithecia 854950 ×330395 μm; Asci shorter than
510 μm; Ascospore partspores bacilliform, sometimes
not divided……..……………………………….. P. onorei
7a. Synnemata mushroomshaped, 0.512 mm long……….
.………………………………………………… P. agarica
7b. Synnemata with other shapes ………………………….8
8a. Synnemata 5060 mm long; αconidia ovoid……....
…………………………………………..……… P. sinensis
8b. Synnemata shorter than 15 mm long; αconidia globose to
subglobose or ellipsoidal…… .……………………….9
9a. αPhialides 10.518.5 ×0.81.8 μm, βphialides narrowly
slender, 2264 ×11.5 μm………..………… P. aurantiaca
9b. αPhialides 2057 ×1.02.3 μm, βphialides narrowly
lageniform or subulate, 7.030 ×2.33.7 μm…………
…………………………………………….P. yunnanensis
3.4 Polycepholomyces
The genus Polycephalomyces was established with a single
species, P. formosu s, by Kobayasi (1941). The type
specimen of the species and genus, collected from Prov.
Musasi, Mt. Takaosan, Japan, was destroyed and a
collection was designated as a neotypefrom a
collectiononinsectlarvafromSriLanka(Seifert,1985).
The neotypewas originally labeled Cordyceps falcata B
& B, Hakagata, Feb. 1923, HERB. T. PetchBequeathed
1949, latterly relabeled Cordyceps falcata Berk., Sri
Lanka,Hakagata,Feb1923,exHerb.T.Petch,K(M)
187597and is now in poor condition, not suitable for
both morphological and molecular studies. In designating
aneotype, Seifert had overlooked that there was an
illustration that should have been selected as a lectotype
as that is original material.This neoptypicationcan
therefore be set aside and so an epitype, to support the
lectotype, is needed to stabilize the use of both the
generic and species names.
When selecting the epitype, living strains recently obtained
from Japan by Ban (2016) were considered. A collection from
Hara, Takatsukishi, Osaka Pref., Japan, in 2005, near to the
type locality Prov. Musasi, Mt. Takaosan(Kobayasi, 1941)
was chosen to support the lectotype of P. formosus as
discussed above. The epitype is derived from a living strain
named as P. formosuslike by Ban (2016) and as P. formosus in
the Nite Biological Resource Center (NBRC 109993), where it
is specied on Coleopteran larva from Hara, Takatsukishi,
Osaka Pref., Japan, in 2005.Details of the nomenclature and
typication are presented below.
Polycephalomyces Kobayasi, Sci. Rep. Tokyo Bunrika Daig.,
Sect. B 5: 245 (1941).
Type:Polycephalomyces formosus Kobayasi.
13A new genus of Pleurocordyceps
J. Syst. Evol. 00 (0): 116, 2021www.jse.ac.cn
Polycephalomyces formosus Kobayasi, Sci. Rep. Tokyo
Bunrika Daig., Sect. B 5: 245 (1941).
Holotype: Japan, Prov. Musasi, Mt. Takaosan, on larvae of
Coleoptera, 15 Jul. 1936, Y. Kobayasi (herb. Kobayasi
destroyed).
Lectotype (Fungal Names FN570686): Figures ACof
Polycephalomyces formosus Y. Kobayasi in Kobayasi (1941,
Sci. Rep. Tokyo Bunrika Daig., Sect. B 5: 246) (reproduced
here as Fig. 8), lectotype designated here.
Epitype (Fungal Names FN570687):Asubculture,
derived from a living strain (NBRC 109993) originated
from Japan, Hara, Takatsukishi, Osaka Pref., on coleop-
teran larva, 2005 (NBRC H12427), now preserved in the
China General Microbiological Culture Collection Center
(CGMCC) in a metabolically inactive state using lyophiliza-
tion and deepfreezing in liquid nitrogen and accessed as
CGMCC 5.2206 is designated here as epitype to support
the lectotype (Fungal Names FN570686) designated
above. A dried culture (with 20 plates), prepared at the
same time was preserved in the Fungarium (HMAS),
Institute of Microbiology, Chinese Academy of Sciences
andaccessedasHMAS248264.
Description: Sexual morph: unknown. Asexual morph:A
description of the epitype, cultured on PDA at 25 °C for 1020
days, is provided above in the morphological observations
under Polycephalomyces formosuslike.
Ecology: entomogenous, parasitic on a Coleoptera larvae.
Distribution: Japan.
4 Discussion
All the eight major clades included in this multigene analysis
received very strong support. Further grouping of these
clades mostly received less than 80% BP support, except the
extended group including Ophiocordycipitaceae, Polycepha-
lomyces formosuslike, Pleurocordyceps/Polycephalomyces
and Clavicipitaceae clades received support of 96% BP and
also 100% PP (Fig. 6). This showed that members of these
clades were more closely related than the other clades,
even some of the former Cordyceps s. lat. group, that is, the
Cordycipitaceae clade. However, the relationships among
the Clavicipitaceae, Ophiocordycipitaceae, Pleurocordyceps/
Polycephalomycesand P. fo rmosuslike clades were not
resolved in ML analysis. Each of them was more or less
equally independent from each other. The possible family
clade of Pleurocordyceps/Polycephalomycesproposed by
Wang et al. (2012) is conrmed and a further possible family
clade of P. formo suslike is suggested in this study
(Figs. 6 and 7).
The phylogenetic analyses revealed more molecular
variations within the P. formosuslike clade, which were
divided into two subclades (Figs. 6 and 7). This study
included only one taxon in each of the subclades, P. formosus
and Cordyceps pleuricapitata. With more taxon sampling with
the P. formosuslike clade, it is likely to dierentiate those
two subclades as separate genus or even higher taxonomy
rank. The similar scenario has resulted in the Pleurocordyceps/
Polycephalomycesclade. The two subclades were now
recognized as two genera, Pleurocordyceps and Perennicor-
dyceps, with strong support by morphology in both the
sexual and asexual morphs and phylogeny in the ML and
Bayesian analyses.
Polycephalomyces was based on P. form os us collected
from Japan (see above), with only one type of conidia
described as ellipsoidal to ovoid, 2.53.2 ×11.2 μm,
produced on the head of synnemata (Kobayasi, 1941). A
further description of the species was provided by Seifert
(1985, see above), gave the conidia as obovoid to
ellipsoidal, 1.53×11.5 μm based on a collection from
Sri Lanka. Later, another strain identied as P. fo rmosus,
ARSEF 1424, was obtained from Poland by Bischoet al.
(2003) and has widely been used to represent Polycepha-
lomyces in phylogenetic analyses (e.g., Chaverri et al., 2005;
Fig. 8. Polycephalomyces formosus (Kobayasi, 1941: Pl. s.n. and AC, lectotype)
14 Wang et al.
J. Syst. Evol. 00 (0): 116, 2021 www.jse.ac.cn
Wang et al., 2012; Kepler et al., 2013; Quandt et al., 2014;
Wangetal.,2014,2015a,2015b;Sanjuanetal.,2015;
Ban, 2016; Crous et al., 2017a, 2017b; Xiao et al., 2018).
While the strain ARSEF 1424 produced both αand βtypes
of conidia (Bischoet al., 2003), it diered in the type of
conidia (αconidia) as described by Kobayasi (1941) and
Seifert (1985) and therefore was a misapplication of the
name. A number of new species were subsequently
described with two types of conidia in Polycephalomyces
(Wang et al., 2012, 2015a, 2015b; Crous et al., 2017a; Xiao
et al., 2018). However, species with one, two and three
types of conidia were included Polycephalomyces by Seifert
(1985); P.formosus,P.cylindrosporusSamson & H.C. Evans
(one type of conidia); P.ramosus (two types of conidia);
and P. tomentosu s (three types of conidia). He could not
have appreciated the generic signicance of conidal types
at that time in the absence of DNA data. Recently,
P. formosu slike strains with one type of conidia, from
Japan have been recovered and demonstrate that they are
phylogenetically distinguished from those species having
two types of conidia (Ban, 2016, g. 3). Ban (2016) provided
convincing evidence of the importance of conidial types in
phylogenetic analyses and morphological taxonomy (g. 2
and table 2 in Ban, 2016). The P. formosuslike strains
displayed typical characters including only one type of
conidia (αconidia) produced in conidial mass at the apex of
synnema (Ban, 2016; this study) of P. for mosus, which
typied the genus Polycephalomyces (Kobayasi, 1941). The
lectotype and supporting epitype designated in this study
for P. formosus and further for Polycephalomyces have one
type of conidia.
There are currently 23 names published under Poly-
cephalomyces (see Index Fungorum, accessed on 14
October 2020). Among them, 10 have been combined
with the new genus, Pleurocordyceps,asshownabove;four
were previously combined in Perennicordyceps.Polycepha-
lomyces orbicularis, was a taxonomic synonym of Stilbella
byssiseda (Seifert, 1985; also see Species Fungorum:
Stilbella byssiseda;Hypocreomycetidae)whileP. f ormosus
remains as the true Polycephalomyces in our study. There
are six names which need further taxonomic studies. Most
of them were described as having one type of conidia,
except P. kanzashianus which was described from only the
sexual morph (Shimizu, 1994). As shown above, sequences
named as both P. kanzashianus and P. nip po ni ca were
clustered in the same terminal species clade sharing a high
similarity, but their sexual morphs are distinguished
signicantly in morphology.
Among ve species with one conidial type in the
protologue, two were later described as having two or three
conidial types; P. ramosus (two; Seifert, 1985; Bischoet al.,
2003; Matočec et al., 2014; and Ban, 2016 for both
P. ramosus and P. ramosuslike) and P. tomentosus (three;
Seifert, 1985; and one; Sutton, 1973; Bischoet al., 2003;
Ban, 2016). Although the sequences have been used for
phylogenetic analyses, the identity of both P. ramosus and
P. tomentosus require further investigation. The remaining
three, P. cylindrosporus, P. ditmarii Van Vooren & Audibert and
P. paludosus Mains, might possibly share the same mor-
phology and molecular features, but they were not adequately
studied and there is no DNA sequence available in GenBank.
Acknowledgements
This work is supported by the Ministry of Science and
Technology (2018YFD0400201, 2012FY111600), the Chinese
Academy of Sciences (XDA19050201) and the Ministry of
Ecology and Environment of China (2019HJ2096001006).
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Supplementary Material
The following supplementary material is available online for
this article at http://onlinelibrary.wiley.com/doi/10.1111/jse.
12705/suppinfo:
Table S1. Taxa used in ITS phylogenetic analyses.
Table S2. Taxa used in 5gene phylogenetic analyses.
16 Wang et al.
J. Syst. Evol. 00 (0): 116, 2021 www.jse.ac.cn
... tomentosus (Seifert 1985). These species either lacked molecular data or their updated strain descriptions did not match those of the protologue (Wang et al. 2021). These three new species were similar to Po. ramosus, producing two types of conidia, while Po. ...
... kanzashianus are clustered together. Nevertheless, Wang et al. (2021) pointed out that they were distinct species, based on their sexual morphology characteristics. In addition, Wang et al. (2021) noted the description of the spore type of Pl. lianzhouensis was not clear and future research should strengthen the observation of its asexual morphology to determine its more accurate classification position. ...
... Nevertheless, Wang et al. (2021) pointed out that they were distinct species, based on their sexual morphology characteristics. In addition, Wang et al. (2021) noted the description of the spore type of Pl. lianzhouensis was not clear and future research should strengthen the observation of its asexual morphology to determine its more accurate classification position. Cordyceps pleuricapitata has formed a monophyletic branch in the genus Polycephalomyces. ...
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... In order to investigate the relationships of Torrubiellomyces, we sampled Polycephalomyces s.lat. (Polycephalomyces insertae sedis, Pleurocordyceps and Perennicordyceps); including a range of species representing distinct ecologies, such as animal and fungal parasites (Kepler et al. 2013, Matočec et al. 2014, Xiao et al. 2018, Wang et al. 2021 (Fig. 3). Our phylogeny suggests the Polycephalomyces clade as the most basal lineage within Ophiocordycipitaceae (BS = 53) and strongly supports Torrubiellomyces as a distinct genus (BS = 98), closely related to a clade strictly associated with insects: Perennicordyceps cuboidea, Pe. ...
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Molecular phylogenetic and chemical analyses, and morphological characterization of collections of North American Paraisaria specimens support the description of two new species and two new combinations for known species. P. cascadensis sp. nov. is a pathogen of Cyphoderris (Orthoptera) from the Pacific Northwest USA and P. pseudoheteropoda sp. nov. is a pathogen of cicadae (Hemiptera) from the Southeast USA. New combinations are made for Ophiocordyceps insignis and O. monticola based on morphological, ecological, and chemical study. A new cyclopeptide family proved indispensable in providing chemotaxonomic markers for resolving species in degraded herbarium specimens for which DNA sequencing is intractable. This approach enabled the critical linkage of a 142-year-old type specimen to a phylogenetic clade. The diversity of Paraisaria in North America and the utility of chemotaxonomy for the genus are discussed.
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Clavicipitoid fungi comprise three families, namely Clavicipitaceae , Cordycipitaceae , and Ophiocordycipitaceae . They are found worldwide and are specialized pathogens of invertebrate, plant and fungal hosts. Over the last decade, morphology- and phylogeny-based studies on clavicipitoid fungi have increased. The latter have revealed that Polycephalomyces , Perennicordyceps and Pleurocordyceps consistently cluster together.These genera are currently considered as members of Ophiocordycipitaceae . Nonetheless, information with regard to their diversity and ecology remains sparse. To fill this gap, we collected 29 fresh specimens from insect and fungal substrates from tropical and subtropical evergreen forests in Thailand and southwestern China. We performed detailed morphological analyses and constructed photoplates for all isolated fungi. We used extensive taxon sampling and a dataset comprising internal transcribed spacer gene region (ITS), small subunit ribosomal RNA gene region (SSU), large subunit rRNA gene region (LSU), translation elongation factor 1-alpha gene region (TEF-1α), RNA polymerase II largest subunit gene region (RPB1) and RNA polymerase II second largest subunit (RPB2) to infer order-, family and genus-level phylogenetic trees. Based on these biphasic analyses, we segregate Polycephalomyces , Perennicordyceps , and Pleurocordyceps from Ophiocordycipitaceae and introduce the new family Polycephalomycetaceae to accomodate these three genera. The majority of species in this family have a vast range of insect and fungal hosts. The sexual morph of Polycephalomycetaceae has stromatic ascomata, long stipes, thick peridium, and cylindrical secondary spores. The asexual morph is characterized by colonies on the host surface or synnemata with stipes on the host, one or two types of phialides, and cylindrical to fusiform conidia. We expand the number of taxa in the new family by introducing seven new species ( Polycephalomyces albiramus , Perennicordyceps lutea , Pleurocordyceps parvicapitata , Pleurocordyceps lanceolatus , Pleurocordyceps nutansis , Pleurocordyceps heilongtanensis , Pleurocordyceps vitellina ), nine new hosts, and one new combination ( Perennicordyceps elaphomyceticola ). The results herein hint at a high level of diversity for Polycephalomycetaceae . Future investigations focusing on obtaining additional collections and specimens from different geographical areas would help to reveal not only the extent of the group’s diversity, but also resolve its deeper phylogenetic placement.
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Novel species of fungi described in this study include those from various countries as follows: Antarctica: Cadophora antarctica from soil. Australia: Alfaria dandenongensis on Cyperaceae, Amphosoma persooniae on Persoonia sp., Anungitea nullicana on Eucalyptus sp., Bagadiella eucalypti on Eucalyptus globulus, Castanediella eucalyptigena on Eucalyptus sp., Cercospora dianellicola on Dianella sp., Cladoriella kinglakensis on Eucalyptus regnans, Cladoriella xanthorrhoeae (incl. Cladoriellaceae fam. nov. and Cladoriellales ord. nov.) on Xanthorrhoea sp., Cochlearomyces eucalypti (incl. Cochlearomyces gen. nov. and Cochlearomycetaceae fam. nov.) on Eucalyptus obliqua, Codinaea lambertiae on Lambertia formosa, Diaporthe obtusifoliae on Acacia obtusifolia, Didymella acaciae on Acacia melanoxylon, Dothidea eucalypti on Eucalyptus dalrympleana, Fitzroyomyces cyperi (incl. Fitzroyomyces gen. nov.) on Cyperaceae, Murramarangomyces corymbiae (incl. Murramarangomyces gen. nov., Murramarangomycetaceae fam. nov. and Murramarangomycetales ord. nov.) on Corymbia maculata, Neoanungitea eucalypti (incl. Neoanungitea gen. nov.) on Eucalyptus obliqua, Neoconiothyrium persooniae (incl. Neoconiothyrium gen. nov.) on Persoonia laurina subsp. laurina, Neocrinula lambertiae (incl. Neocrinulaceae fam. nov.) on Lambertia sp., Ochroconis podocarpi on Podocarpus grayae, Paraphysalospora eucalypti (incl. Paraphysalospora gen. nov.) on Eucalyptus sieberi, Pararamichloridium livistonae (incl. Pararamichloridium gen. nov., Pararamichloridiaceae fam. nov. and Pararamichloridiales ord. nov.) on Livistona sp., Pestalotiopsis dianellae on Dianella sp., Phaeosphaeria gahniae on Gahnia aspera, Phlogicylindrium tereticornis on Eucalyptus tereticornis, Pleopassalora acaciae on Acacia obliquinervia, Pseudodactylaria xanthorrhoeae (incl. Pseudodactylaria gen. nov., Pseudodactylariaceae fam. nov. and Pseudodactylariales ord. nov.) on Xanthorrhoea sp., Pseudosporidesmium lambertiae (incl. Pseudosporidesmiaceae fam. nov.) on Lambertia formosa, Saccharata acaciae on Acacia sp., Saccharata epacridis on Epacris sp., Saccharata hakeigena on Hakea sericea, Seiridium persooniae on Persoonia sp., Semifissispora tooloomensis on Eucalyptus dunnii, Stagonospora lomandrae on Lomandra longifolia, Stagonospora victoriana on Poaceae, Subramaniomyces podocarpi on Podocarpus elatus, Sympoventuria melaleucae on Melaleuca sp., Sympoventuria regnans on Eucalyptus regnans, Trichomerium eucalypti on Eucalyptus tereticornis, Vermiculariopsiella eucalypticola on Eucalyptus dalrympleana, Verrucoconiothyrium acaciae on Acacia falciformis, Xenopassalora petrophiles (incl. Xenopassalora gen. nov.) on Petrophile sp., Zasmidium dasypogonis on Dasypogon sp., Zasmidium gahniicola on Gahnia sieberiana. Brazil: Achaetomium lippiae on Lippia gracilis, Cyathus isometricus on decaying wood, Geastrum caririense on soil, Lycoperdon demoulinii (incl. Lycoperdon subg. Arenicola) on soil, Megatomentella cristata (incl. Megatomentella gen. nov.) on unidentified plant, Mutinus verrucosus on soil, Paraopeba schefflerae (incl. Paraopeba gen. nov.) on Schefflera morototoni, Phyllosticta catimbauensis on Mandevilla catimbauensis, Pseudocercospora angularis on Prunus persica, Pseudophialophora sorghi on Sorghum bicolor, Spumula piptadeniae on Piptadenia paniculata. Bulgaria: Yarrowia parophonii from gut of Parophonus hirsutulus. Croatia: Pyrenopeziza velebitica on Lonicera borbasiana. Cyprus: Peziza halophila on coastal dunes. Czech Republic: Aspergillus contaminans from human fingernail. Ecuador: Cuphophyllus yacurensis on forest soil, Ganoderma podocarpense on fallen tree trunk. England: Pilidium anglicum (incl. Chaetomellales ord. nov.) on Eucalyptus sp. France: Planamyces parisiensis (incl. Planamyces gen. nov.) on wood inside a house. French Guiana: Lactifluus ceraceus on soil. Germany: Talaromyces musae on Musa sp. India: Hyalocladosporiella cannae on Canna indica, Nothophoma raii from soil. Italy: Setophaeosphaeria citri on Citrus reticulata, Yuccamyces citri on Citrus limon. Japan: Glutinomyces brunneus (incl. Glutinomyces gen. nov.) from roots of Quercus sp. Netherlands (all from soil): Collariella hilkhuijsenii, Fusarium petersiae, Gamsia kooimaniorum, Paracremonium binnewijzendii, Phaeoisaria annesophieae, Plectosphaerella niemeijerarum, Striaticonidium deklijnearum, Talaromyces annesophieae, Umbelopsis wiegerinckiae, Vandijckella johannae (incl. Vandijckella gen. nov. and Vandijckellaceae fam. nov.), Verhulstia trisororum (incl. Verhulstia gen. nov.). New Zealand: Lasiosphaeria similisorbina on decorticated wood. Papua New Guinea: Pseudosubramaniomyces gen. nov. (based on Pseudosubramaniomyces fusisaprophyticus comb. nov.). Slovakia: Hemileucoglossum pusillum on soil. South Africa: Tygervalleyomyces podocarpi (incl. Tygervalleyomyces gen. nov.) on Podocarpus falcatus. Spain: Coniella heterospora from herbivorous dung, Hymenochaete macrochloae on Macrochloa tenacissima, Ramaria cistophila on shrubland of Cistus ladanifer. Thailand: Polycephalomyces phaothaiensis on Coleoptera larvae, buried in soil. Uruguay: Penicillium uruguayense from soil. Vietnam: Entoloma nigrovelutinum on forest soil, Volvariella morozovae on wood of unknown tree. Morphological and culture characteristics along with DNA barcodes are provided.
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Novel species of fungi described in this study include those from various countries as follows: Australia: Banksiophoma australiensis (incl. Banksiophoma gen. nov.) on Banksia coccinea, Davidiellomyces australiensis (incl. Davidiellomyces gen. nov.) on Cyperaceae, Didymocyrtis banksiae on Banksia sessilis var. cygnorum, Disculoides calophyllae on Corymbia calophylla, Harknessia banksiae on Banksia sessilis, Harknessia banksiae-repens on Banksia repens, Harknessia banksiigena on Banksia sessilis var. cygnorum, Harknessia communis on Podocarpus sp., Harknessia platyphyllae on Eucalyptus platyphylla, Myrtacremonium eucalypti (incl. Myrtacremonium gen. nov.) on Eucalyptus globulus, Myrtapenidiella balenae on Eucalyptus sp., Myrtapenidiella eucalyptigena on Eucalyptus sp., Myrtapenidiella pleurocarpae on Eucalyptus pleurocarpa, Paraconiothyrium hakeae on Hakea sp., Paraphaeosphaeria xanthorrhoeae on Xanthorrhoea sp., Parateratosphaeria stirlingiae on Stirlingia sp., Perthomyces podocarpi (incl. Perthomyces gen. nov.) on Podocarpus sp., Readeriella ellipsoidea on Eucalyptus sp., Rosellinia australiensis on Banksia grandis, Tiarosporella corymbiae on Corymbia calophylla, Verrucoconiothyrium eucalyptigenum on Eucalyptus sp., Zasmidium commune on Xanthorrhoea sp., and Zasmidium podocarpi on Podocarpus sp. Brazil: Cyathus aurantogriseocarpus on decaying wood, Perenniporia brasiliensis on decayed wood, Perenniporia paraguyanensis on decayed wood, and Pseudocercospora leandrae-fragilis on Leandra fragilis. Chile: Phialocephala cladophialophoroides on human toe nail. Costa Rica: Psathyrella striatoannulata from soil. Czech Republic: Myotisia cremea (incl. Myotisia gen. nov.) on bat droppings. Ecuador: Humidicutis dictiocephala from soil, Hygrocybe macrosiparia from soil, Hygrocybe sangayensis from soil, and Polycephalomyces onorei on stem of Etlingera sp. France: Westerdykella centenaria from soil. Hungary: Tuber magentipunctatum from soil. India: Ganoderma mizoramense on decaying wood, Hodophilus indicus from soil, Keratinophyton turgidum in soil, and Russula arunii on Pterigota alata. Italy: Rhodocybe matesina from soil. Malaysia: Apoharknessia eucalyptorum, Harknessia malayensis, Harknessia pellitae, and Peyronellaea eucalypti on Eucalyptus pellita, Lectera capsici on Capsicum annuum, and Wallrothiella gmelinae on Gmelina arborea. Morocco: Neocordana musigena on Musa sp. New Zealand: Candida rongomai-pounamu on agaric mushroom surface, Candida vespimorsuum on cup fungus surface, Cylindrocladiella vitis on Vitis vinifera, Foliocryphia eucalyptorum on Eucalyptus sp., Ramularia vacciniicola on Vaccinium sp., and Rhodotorula ngohengohe on bird feather surface. Poland: Tolypocladium fumosum on a caterpillar case of unidentified Lepidoptera. Russia: Pholiotina longistipitata among moss. Spain: Coprinopsis pseudomarcescibilis from soil, Eremiomyces innocentii from soil, Gyroporus pseudocyanescens in humus, Inocybe parvicystis in humus, and Penicillium parvofructum from soil. Unknown origin: Paraphoma rhaphio­lepidis on Rhaphiolepsis indica. USA: Acidiella americana from wall of a cooling tower, Neodactylaria obpyriformis (incl. Neodactylaria gen. nov.) from human bronchoalveolar lavage, and Saksenaea loutrophoriformis from human eye. Vietnam: Phytophthora mekongensis from Citrus grandis, and Phytophthora prodigiosa from Citrus grandis. Morphological and culture characteristics along with DNA barcodes are provided.
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A new genus, Regiocrella, is described with two species, R. camerunensis and R. sinensis, based on specimens collected in Cameroon and China. Both species are parasitic on scale insects (Coccidae, Homoptera). Morphological and molecular evidence place the new genus in the Clavicipitaceae (Hypocreales), despite its combination of characters that are atypical of that family; Regiocrella is characterized by having perithecia partly immersed in a subiculum, noncapitate asci, unicellular fusiform ascospores and pycnidial-acervular conidiomata. The two new species, R. camerunensis and R. sinensis, are distinguished based on ascospore and perithecium size. Morphological characters were evaluated and compared to other genera in the Clavicipitaceae, especially those parasitic on scale insects or with pycnidial-acervular anamorphs or synanamorphs (i.e. Aschersonia, Ephelis or Sphacelia): Atkinsonella, Balansia, Claviceps, Epichlöe, Hypocrella, Myriogenospora and Neoclaviceps. The phylogenetic relationships of Regiocrella were examined with three gene loci: large subunit nuclear ribosomal DNA (LSU), translation elongation factor 1-α (TEF), and RNA polymerase II subunit 1 (RPB1). The results of this study confirm that Regiocrella is distinct from other genera in the Clavicipitaceae and that its two species form a monophyletic group. Regiocrella is shown to be closely related to the scale insect pathogen Hypocrella and the plant-associated genera Balansia, Claviceps, Epichlöe, Myriogenospora and Neoclaviceps. This study also provides insights into the evolution of pycnidial-acervular conidiomata and scale insect parasitism within the Clavicipitaceae. Plant-associated genera form a monophyletic group correlated with Clavicipitaceae subfamily Clavicipitoideae sensu Diehl. We also demonstrate that scale insect parasites have multiple evolutionary origins within the family and genera with pycnidial-acervular anamorphs or synanamorphs have a single origin.
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ITS sequence analysis and ascomatal development of Pseudogymnoascus roseus strains isolated from sclerotia of Cordyceps sinensis collected from the Tibetan Plateau, China, are reported in this paper. The ITS sequences of three strains from different locations were identical and were compared with sequences obtained from the BLAST search in GenBank. The strains display the same morphology as the reference collection deposited in K, matching the species description of P roseus. Ascomatal development of the P. roseus strains is described. Ascomata of P. roseus were found to comprise an aggregation of asci from several different ascomatal initials enveloped by a loose, thick-walled hyphal network. In the parsimony analysis, ITS sequences of P. roseus and other Myxotrichaceae grouped outside the Onygenales and clustered with those of discoid fungi. Members of Myxotrichaceae were considered closely related to discomycetes, but greatly diverged from onygenalean fungi. Myxotrichaceae did not form a monophyletic group in the ITS tree.