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SARS-CoV-2 specific memory B cells frequency in recovered patient remains stable while antibodies decay over time

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  • Felsenstein Medical Research Center- FMRC Tel-Aviv University
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Abstract and Figures

The breadth of the humoral immune response following SARS-CoV-2 infection was indicated to be important for recovery from COVID-19. Recent studies have provided valuable insights regarding the dynamics of the antibody response in symptomatic COVID-19 patients. However, the information regarding the dynamics of the serological and cellular memory in COVID-19 recovered patients in scarce. It is imperative to determine the persistence of humoral memory in COVID-19 recovered patients as it will help to evaluate the susceptibility of recovered patients to re-infection. Here, we describe the dynamics of both the SARS-CoV-2 specific serological and B cell response in COVID-19 recovered patients. We found that symptomatic SARS-CoV-2 patients mount a robust antibody response following infection however, the serological memory decays in recovered patients over the period of 6 months. On the other hand, the B cell response as observed in the SARS-CoV-2 specific memory B cell compartment, was found to be stable over time. Moreover, the frequency of SARS-CoV-2 specific B cell plasmablasts was found to be associated with the SARS-CoV-2 specific antibody levels. These data, suggests that the differentiation of short-lived plasmablasts to become long-lived plasma cells is impaired and the main contributor of antibody production are the short-lived plasmablasts. Overall, our data provides insights regarding the humoral memory persistence in recovered COVID-19 patients. Notwithstanding the insights from this study, it is still to be determined if the persistence of SARS-CoV-2 memory B cells can be considered as a correlate of protection in the absence of serological memory.
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SARS-CoV-2 specific memory B cells frequency in recovered patient remains stable while
antibodies decay over time
Vaisman-Mentesh, A.1, Dror, Y1., Tur-Kaspa, R.2, Markovitch, D.3, Tatiana Kournos3.,
*Dicker, D.3 and *Wine, Y.1
1The Shmunis School of Biomedicine and Cancer Research, George S. Wise Faculty of Life
Sciences, Tel Aviv University, Tel Aviv 69978, Israel.
2Department of Medicine D and the Liver Institute, Rabin Medical Center, Beilinson
Hospital, Molecular Hepatology Research Laboratory, Felsenstein Medical Research
Center, Sackler School of Medicine, Tel Aviv University, 39 Jabotinsky Street, Petah-
Tikva 49100, Israel
3 Internal Medicine D, Hasharon Hospital-Rabin Medical Center, Petach Tikva, Israel.
Sackler School of Medicine, Tel Aviv University, 6997801 Israel
*To whom correspondence should be addressed: daniel3@013.net,
YarivWine@tauex.tau.ac.il
Keywords: COVID-19, SARS-CoV-2, B cell response, Antibody, serology, antibody
repertoire, RBD, humoral response, serological memory
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Abstract
The breadth of the humoral immune response following SARS-CoV-2 infection was indicated
to be important for recovery from COVID-19. Recent studies have provided valuable insights
regarding the dynamics of the antibody response in symptomatic COVID-19 patients.
However, the information regarding the dynamics of the serological and cellular memory in
COVID-19 recovered patients in scarce. It is imperative to determine the persistence of
humoral memory in COVID-19 recovered patients as it will help to evaluate the susceptibility
of recovered patients to re-infection. Here, we describe the dynamics of both the SARS-CoV-
2 specific serological and B cell response in COVID-19 recovered patients. We found that
symptomatic SARS-CoV-2 patients mount a robust antibody response following infection
however, the serological memory decays in recovered patients over the period of 6 months. On
the other hand, the B cell response as observed in the SARS-CoV-2 specific memory B cell
compartment, was found to be stable over time. Moreover, the frequency of SARS-CoV-2
specific B cell plasmablasts was found to be associated with the SARS-CoV-2 specific
antibody levels. These data, suggests that the differentiation of short-lived plasmablasts to
become long-lived plasma cells is impaired and the main contributor of antibody production
are the short-lived plasmablasts.
Overall, our data provides insights regarding the humoral memory persistence in recovered
COVID-19 patients. Notwithstanding the insights from this study, it is still to be determined if
the persistence of SARS-CoV-2 memory B cells can be considered as a correlate of protection
in the absence of serological memory.
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Background
The first patients detected positive to coronavirus disease 2019 (COVID-19) were identified in
Wuhan, China 1. These patients were found to be infected by severe acute respiratory syndrome
coronavirus 2 (SARS-CoV-2) leading to the declaration of the World Health Organization
(WHO) that COVID-19 is a worldwide pandemic 2. Rapid response to the outbreak provided
important information regarding the virus genome sequence and especially the Spike protein
(S protein) and its sub-region, the receptor binding domain (RBD) which is responsible for the
binding to the human host cell receptor, human Angiotensin-converting enzyme 2 (hACE2)
and mediates virus entry 3. The S protein is highly immunogenic with the RBD holding the
potential to elicit neutralizing antibodies (nAbs) 4. The S protein RBD, was shown to elicit
antibodies starting early as 3 days following the onset of symptoms 5 in which their levels
increase along the progression of the disease 6-8. Measuring RBD-specific serum antibody titers
in samples collected from COVID-19 patients during active disease, suggests that in most
cases, SARS-CoV-2 infection mounts a robust humoral response and generates antibodies
specific to the S protein RBD 9. Many serological studies are focused on developing diagnostic
approaches for the detection of virus-specific antibodies by the identification of IgM and IgG
antibodies as they are indicative of a productive progression of humoral immune response.
Serological tests for specific SARS-CoV-2 antibodies detection in patient’s blood are
important to trace contacts and for serological surveillance. Still the question remains if
serological memory persist over time and recent studies suggest that the antibodies mounted
against SARS-CoV-2 do not persist over time and decay several weeks following onset of
symptoms 10. At the cellular level, the T cell population was investigated as it was suggested
that these cells may contribute to recovery 11. T cell reactivity to SARS-CoV-2 epitopes was
detected in non-exposed individuals suggesting a cross-reactive T cell recognition between
circulating “common cold” coronaviruses and SARS-CoV-2 12. The latter report further
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strengthens the idea that memory wanes over time as the population does not develop immunity
to common cold. On the other hand, SARS-CoV-2 specific T cells present in the general
population may impact susceptibility and pathogenesis of SARS-CoV-2 infection 13,14.
Recent studies report on the isolation of RBD-specific B cells aiming at elucidating the
composition of neutralizing antibodies using single cell analysis 15,16. However, the
information regarding SARS-CoV-2 specific B cell dynamics is scarce and there is little
information regarding the dynamics of antibodies and their association with the antigen-
specific B cell compartment in COVID-19 recovered patients. This information is detrimental
as it can help to evaluate the breadth of the humoral memory in COVID-19 recovered patients
and to determine whither this will contribute for long-lasting serological and cellular memory.
Adaptive memory is two-parted, comprising long-lived antibody-secreting plasma cells
(LLPC) which contribute to the serological memory and long-lived memory B cells (mBC)
that have the capacity to react quickly to a recurrent antigenic challenge (cellular memory) 17.
In this study we aim to understand the temporal dynamics of the serological and cellular
memory in COVID-19 recovered patients.
To this end, we collected sera from 54 active COVID-19 patients and whole blood from 57
COVID-19 recovered patients and six follow up samples from the recovered cohort, along with
their clinical data. Sera were tested to determine the levels of RBD-specific antibodies and their
neutralization capacity. B cells isolated by FACS from COVID-19 recovered patients were
used to determine the frequency of RBD-specific B cell subsets. We found that RBD-specific
antibodies increase rapidly in symptomatic COVID-19 patients and further decline rapidly in
recovered patients. We identified a strong correlation between the RBD-specific IgG levels and
their neutralization capacity suggesting that RBD-specific antibody titer by itself may be used
as a proxy to evaluate their neutralization capacity. Interestingly, we found that COVID-19
patients with metabolic disorder exhibit significant higher levels of RBD-specific antibodies.
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Additional association was found between the levels of RBD-specific antibodies with ferritin
and C-reactive protein (CRP) indicating that disease severity leads to a robust immune
response. More importantly, we found that there is a correlation between the time following
onset of symptoms and the RBD-specific antibody titers indicating that the recovered COVID-
19 patients experience a decay in their serological memory. In contrast to this decay, RBD-
specific memory B cells were found to be stable within the range of six months following onset
of symptoms. Overall, our data obtained in this study reveals a discordance between serological
and cellular memory in COVID-19 recovered patients which has important implications on re-
infection susceptibility and vaccine design.
Results and discussion
To study the acute phase antibody response to SARS-CoV-2 infection and the persistence of
antibodies in recovered COVID-19 patients, RBD-specific IgG/A/M levels were measured in
sera from symptomatic (n=54), recovered (n=57) COVID-19 patients and control sera (n=26).
Antibody measurements were carried out in duplicates and each experiment was repeated
independently twice with high reproducibility (Figure S1). Antibody levels were calculated as
the signal over mean signal obtained in the negative controls used in each microwell plate
(Figure 1A). We observe that IgG/A/M levels in the symptomatic COVID-19 cohort, increases
significantly 5 days following onset of symptoms (DFS). The antibody titers for all isotypes
continues to increase to reach significantly higher levels compared to the control group
approximately 15 DFS. IgG/A/M levels in recovered patients decreased significantly compared
to the antibody levels in symptomatic patients (15-60 DFS) while still showing scientifically
higher levels compared to the control cohort. IgA levels decreased rapidly in the recovered
patients reaching the basal levels as observed in the control group.
Follow up sera were collected from 11 symptomatic patients to monitor the antibody dynamics
over time within each patient (Figure 1B). We observed a rapid increase in RBD-specific
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antibody levels within 10 DFS for all isotypes which plateaued or started to decline,
approximately 15 DFS. RBD-specific IgG titers in recovered COVID-19 patients, were
measured also in dilution series and calculated as the ratio between area under curve (AUC)
and the mean AUC of control sera that was applied to each microwell plate. Utilizing in vitro
neutralization assay as described previously 18 the nAb fraction out of the total RBD-specific
antibodies was calculated. Each serum sample was applied to microwell plate w/ and w/o
hACE2 as a competitive agent. Hence, the decrease of the signal is associated with the portion
of nAbs that were depleted from the microwell due to blockade of epitopes on the RBD by
hACE2 (Figure S2). We found a strong correlation between the total RBD-specific antibodies
and the nAb suggesting that measuring RBD-specific antibody levels can be used as a proxy
to evaluate the nAbs levels (Figure 1C).
Collected clinical parameters for a subset of the recovered patients were stratified by the
clinical indications. It was previously demonstrated that dyslipidemia and high blood pressure
are linked to metabolic syndrome 19. We found that both parameters were associated with the
levels of anti-RBD IgG (Figure 1D-E). C-reactive protein (CRP), hyperferritinemia and D-
dimer were described as features of systemic inflammatory reactions in COVID-19 patients
and were suggested to be used as an indication for disease severity 20-23. Similar to the previous
reports, we found that ferritin and CRP are correlated while ferritin and lymphocyte counts are
inversely correlated (Figure S3). We examined the association between these COVID-19
severity risk factors and the levels of RBD-specific antibodies. Both serum ferritin and CRP
were found to be associated with high levels of anti-RBD IgG (Figure 1F-G, Figure S4A-B)
while elevated D-dimer was not found to be associated with increased levels of RBD-specific
antibodies (Figure S4C). Age (n=52, Figure S5A) and gender (Figure S5B) showed no, or
weak correlation with RBD-specific IgG levels.
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To evaluate the persistence of anti-RBD antibodies following COVID-19 recovery, the
antibody levels were tested for their association with DFS. We found that the antibody levels
were inversely correlated with the DFS, indicating that they rapidly decay over time (Figure
2A). Follow up samples were collected from six recovered patients approximately 2-3 months
following the previous blood draw time point and revealed a significant drop in anti-RBD
levels reaching to the basal levels found in the control group (Figure 2B).
The “protective” capacity of the humoral memory arm following SARS-CoV-2 can be defined
by the levels of antibodies specific for the pathogen and their neutralization ability. While,
humoral memory, i.e., secretion of specific protective antibodies over time provides the host
with a first line of defense against reinfection and is an informative marker for previous
exposure. Because the half-life of secreted antibodies is short 24, their persistence over time
requires the presence of antibody secreting B cells (i.e. plasmablasts, plasma cells).
To monitor the B cell response in COVID-19 recovered patients and the association between
RBD-specific B cell frequency with IgG levels, we applied PBMCs from recovered patients to
FACS and isolated RBD-specific memory B cells (mBC) and plasmablasts (PB) using the
double stain strategy (Figure S6).
To this end, we calculated the frequency of RBD-specific mBC and PB out of the total CD19+
cell population and analyzed the correlation between the two B cell subsets and with DFS and
RBD-specific antibody levels. In contrast to the decay identified for the serological memory as
reflected by the RBD-specific IgG, we observed that RBD-specific mBC were stable over time
(Figure 3A). Follow up samples from a subset of the COVID-19 recovered patient cohort,
demonstrated similar persistence of RBD-specific mBC and in some cases showing a mild
increase of the RBD-specific mBCs frequency over time (Figure 3B). These data suggest that
the B cell memory compartment is stable for at least 6 months following the recovery from
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COVID-19. These results are in accordance with the general dynamics observed in the mBC
compartment where once established, antigen-specific memory B cell populations are
remarkably stable and highly enriched for quiescent and exceptionally long-lived cells antigen-
specific mBC 25.
It was recently reported that the B cell response following influenza vaccine does not induce
long-lived plasma cells (LLPC) or these LLPC decline over time. Moreover, the associated
influenza-specific antibodies decline in accordance with the LLPC frequency 26. We
hypothesized that the differentiation of B cells to become LLPC is impaired following SARS-
CoV-2 infection as we observed that antigen-specific antibodies decline over time. To test this
hypothesis, we studied the association between the frequency of RBD-specific PB subset and
the frequency of RBD-specific mBC and found that the frequency of both subsets are highly
correlated (Figure 4A). These data are consistent with the immunological mechanism
governing the B cell response following affinity maturation including asymmetrical deviation
of parent B cell post germinal center affinity maturation 27. Next, we investigated the
association between RBD-specific PB and the antibody levels as such association will suggest
that the main contributor for the serum antibody levels are the short lived plasmablasts (SLPB).
Using linear regression analysis, we found an association between the RBD-specific IgG and
the frequency of PB, suggesting that the contributor for serum IgG levels are mainly based on
the presence of activated PB in the blood. In case LLPC were generated we would expect to
find a decrease in PB frequency while a stable level of RBD-specific IgG.
The persistence of RBD-specific mBC suggests that the cellular arm of the adaptive immunity
may provide robust recall immune response in case of re-infection however, the question
remains - will this suffice in providing sufficient protection especially due to the decay of the
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serological memory? These aspects should be further investigated in follow up temporal studies
when samples from recovered patients one year following onset of symptoms will be available.
Materials and methods
Expression and purification of recombinant protein. The plasmids for expression of
recombinant SARS-CoV-2 receptor-binding domain (RBD) was kindly provided by Dr.
Florian Krammer, Department of Microbiology, Icahn School of Medicine at Mount Sinai,
New York, NY, USA. The RBD sequence is based on the genomic sequence of the first virus
isolate, Wuhan-Hu-1, which was released on January 10th 2020 5 .The plasmids for expression
of recombinant human ACE2 (hACE2) was kindly provided by Dr. Ronit Rosenfeld from the
Israel Institute for Biological Research (IIBR). The cloned region encodes amino acids 1-740
of hACE2 followed by a 8xHis tag and a Strep Tag at the 3’ end, cloned in a pCDNA3.1
backbone. Recombinant proteins were produced in Expi293F cells (Thermo Fisher Scientific)
by transfections of these cells with purified DNA using an ExpiFectamine 293 Transfection
Kit (Thermo Fisher Scientific), according to the manufacturer’s protocol, and as described
previously 5 . Supernatants from transfected cells were harvested on day 6 post-transfection
by centrifugation of the culture at 4000xg for 20 minutes and applied to a HisTrap affinity
column (GE Healthcare) that was pre-equilibrated with binding buffer (PBS, pH 7.4, 5mM
imidazole).
Affinity column was washed with 5 column volumes (CV) of wash buffer (PBS, pH 7.4, 20mM
imidazole) followed by 2-step elution with 5CV of elution buffer (PBS, pH 7.4, 50 or 250mM
imidazole). Elution was collected in 1ml fractions and were analyzed by 12% SDS–PAGE.
Fractions containing clean recombinant proteins were merged and dialyzed using Amicon Ultra
(Mercury) cutoff 10K against PBS (pH 7.4). Dialysis products were analyzed by 12% SDS–
PAGE for purity and concentration was measured using Take-5 (BioTek Instruments).
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Purified recombinant proteins were biotinylated using the EZ-Link Micro-NHS-PEG4-
Biotinylation kit (Thermo Scientific), according to the manufacturer’s protocol. Biotinylated
recombinant RBD was bound to Brilliant Violet 421TM Streptavidin (BioLegend) or APC
Streptavidin (Southern Biotech), as previously described 28.
Blood samples. All patients provided informed consent to the use of their data and clinical
samples for the purposes of the present study and blood collection was performed under
institutional review board approvals number 0001281-4 and 0000406-1. All blood samples
were collected at the Hasharon Hospital, Rabin Medical Center under ethical approval number
0265-20. Fifty-four blood samples from 42 active COVID-19 patients were collected into BD
vacutainer serum collection tubes. Isolation of serum was performed according to the
manufacturer’s protocol. Heat-inactivation of sera was performed by incubating the samples at
56°C for 30 minutes.
Fifty-seven blood samples from recovered patients and additional 6 follow up blood samples
were collected into BD vacutainer K2-EDTA collection tubes. Isolation of serum and
peripheral blood mononuclear cells (PBMCs) was performed by density gradient
centrifugation, using Uni-SepMAXI+ lymphocyte separation tubes (Novamed) according to
the manufacturer’s protocol. Control serum samples were from 26 healthy individuals. All
serum samples were aliquoted and stored at -80°C.
Serum titer and serum neutralization capacity. Serum IgG, IgA and IgM antibody levels
were measured by ELISA, as previously described 12,29 with several modifications. Briefly,
RBD-specific Ig levels in active patient sera were determined using 96 well ELISA plates that
were coated overnight at 4°C with 2μg/ml RBD in PBS (pH 7.4). Next, coating solution was
discarded and ELISA plates were blocked with 300µl of 3% w/v skim milk in PBS for 1 hour
at 37C. Following discarding blocking solution, duplicates of serum diluted 1:300 in 3% w/v
skim milk in PBS were added to the wells. Negative control serum samples were also added in
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duplicates of 1:300 dilution. ELISA plates were washed three times with PBST and 50μl of
horseradish peroxidase (HRP) conjugated anti-human IgG H+L / anti-human IgM / anti-human
IgA secondary antibodies were added to each plate at the detection phase (50μl, 1:5000 ratio
in 3% w/v skim milk in PBS) and incubated for 1 hour at room temperature (RT), followed by
three washing cycles with 0.05% PBST. Developing was carried out by adding 50µl of TMB
and reaction was quenched by adding 0.1M sulfuric acid. Plates were read using the Epoch
Microplate Spectrophotometer ELISA plate reader using wave length of 450 and 620 nm.
The neutralization capacity of serum from recovered patients was determined using 96 well
ELISA plates that were coated overnight at 4°C with 2μg/ml RBD in PBS (pH 7.4). Next,
coating solution was discarded and ELISA plates were blocked with 300µl of 3% w/v skim
milk in PBS for 1 hour at 37C. Blocking solution was discarded and 50µl of 400nM hACE2
in 3% w/v skim milk were added to the positive hACE2 wells, and 3% w/v skim milk in PBS
was added to the negative hACE2 wells for 1 hour at RT. Next, triplicates of 1:150 diluted
serum samples w/ and w/o 400 nM hACE2 were added to the positive/negative hACE2 wells
(respectively) and serially diluted 3-fold in 3% w/v skim milk in PBS (1:150– 1:328,05 serum
dilution factor). Negative serum samples were also added in duplicates of 1:150 dilution w/
and w/o 400nM hACE2. Plates were incubated for 1 hour at RT. ELISA plates were washed
three times with PBST and 50μl of HRP conjugated anti-human IgG H+L secondary antibody
were added at the detection phase (50μl, 1:5000 ratio in 3% w/v skim milk in PBS) and
incubated for 1 hour at RT, followed by three washing cycles with 0.05% PBST. Developing
was carried out by adding 50µl of TMB and reaction was quenched by adding 0.1M sulfuric
acid. Plates were read using the Epoch Microplate Spectrophotometer ELISA plate reader
using wave length of 450 and 620nm.
Flow cytometry analysis. PBMCs from COVID-19 recovered patients were stained for 15
minutes in cell staining buffer (BioLegend) at RT in the dark using the following antibodies:
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anti-CD19–APC/Cyanine7 (clone HIB19; BioLegend), anti-CD20–FITC (clone 2H7;
BioLegend), anti-CD27–PerCP/Cyanine5.5 (clone O323; BioLegend), anti-CD38–PE (clone
HB7; BioLegend), biotinylated recombinant RBD coupled to Brilliant Violet 421TM
Streptavidin (RBD-BV421), and biotinylated recombinant RBD coupled to APC Streptavidin
(RBD-APC).
The following B cell population was sorted using a BD Aria III cell sorter (BD Bioscience):
PB (CD19+CD20-CD27highCD38high), RBD specific PB (CD19+CD20-
CD27+CD38highRBD+(double stained)), mBC (CD19+CD20+CD27var) and RBD specific mBC
(CD19+CD20+CD27varRBD+(double stained)). Gating strategy used for cell sorting was consistent
throughout all samples, on singlets that were CD19+. B cells frequencies were calculated using
FlowJo v10 software (BD, USA).
Statistical analysis. All curves were fitted on a sigmoidal dose–response curve and area under
curve of each was calculated. Mann-Whitney test was used to compare continuous variables.
All reported P values were two-tailed, and a P value less than 0.05 were considered statistically
significant. All statistics were performed with GraphPad Prism software (version 8, San Diego,
California).
Acknowledgment
We wish to thank Prof. Itai Benhar and Dr. Limor Nahary from the Shmunis school of
Biomedicine and cancer research, Tel Aviv University, for their assistance in providing the
initial RBD and hACE2 reagents, Dr. Ronit Rosenfeld from the Israel Institute for Biological
Research (IIBR) for her generous assistance and Prof. Mordechai Gerlic and Prof. Ariel Munitz
from the Sackler Faculty of medical, Tel Aviv University.
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Figure 1. RBD-specific antibodies in symptomatic, recovered and control cohorts and
their association with clinical parameters. (A) anti-RBD IgG/A/M antibody levels in
symptomatic, recovered COVID-19 patients and control sera. Symptomatic COVID-19
patients were stratified into DFS groups (0-4, 5-14 and 15-60, the maximum value for DFS in
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symptomatic COVID-19 patients). Statistical significance was calculated using unpaired,
nonparametric, two-tail P values, Mann Whitney Test. Geometric mean and geometric SD are
shown with lines for each group. (B) RBD-specific IgG/A/M levels in follow up samples
collected from a subset of symptomatic patients (n=11). Sera samples were collected at two
time point with one patient at three time points. X-values represent DFS. Each color designates
a different patient. (C) Correlation between the levels of total RBD-specific antibodies and
neutralizing antibodies in COVID-19 recovered patients sera using spearman’s rank correlation
(n=57). RBD-specific IgG levels in COVID-19 recovered patient sera, stratified by the
metabolic syndrome factors, (D) dyslipidemia and (E) hypertension. RBD-specific IgG levels
in COVID-19 recovered patient sera, stratified by COVID-19 risk factors (F) CRP and (G)
ferritin. (ns p > 0.05, * p
0.05, ** p
0.01, *** p
≤#
0.001, **** p
0.0001).
Figure 2: RBD-specific IgG dynamics in COVID-19 recovered patients. (A) Inverse
correlation was found between RBD-specific IgG levels (n=51) and DFS. Correlation was
calculated using spearman’s rank correlation (RS). (B) The differential RBD-specific IgG
levels were measured in follow up serum samples from Six recovered patients.
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Figure 3: Dynamics of RBD-specific mBC. (A) No linear regression was identified for RBD-
specific mBC over time (n=30, R2 = 0.0004). (B) RBD-specific mBC frequencies in follow-up
samples (n=5) at two time points for COVID-19 recovered patients demonstrating that mBC
within patients are stable over time.
Figure 4: Correlation between RBD-specific PB and (A) RBD-specific mBC (n=33) and (B)
RBD-specific IgG (n=31). For (A) spearman’s rank correlation was employed and for (B)
linear regression, where R squared is designated.
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Figure S1: Reproducibility of the ELISA experiments to determine RBD-specific antibodies
in symptomatic COVID-19 patients. Each experiment included negative controls and antibody
levels were calculated as the signal over background ratio. The values were ranked (x-axis)
according to the antibody relative levels and applied to spearman’s rank correlation. Rank
correlation is designated (RS) and p values for each antibody isotype.
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A
B
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Figure S2: Total RBD-specific IgG and neutralizing IgG in COVID-19 recovered patients
as determined by in vitro neutralization assay. For each serum, the differential area under
curve (AUC) was calculated for the total RBD-specific IgG and neutralizing IgG. The ratio
between the mean AUC of the control sera and the tested serum was calculated and stratified
to quartiles (A). Specific serum dilution ELISA for all sample (B) w/ and w/o hACE2 as the
competitive reagent.
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A
B
Figure S3: Correlation between inflammatory risk factors CRP, Ferritin and lymphocytes
counts. All values were normalized to ranking values correlation was calculated using
spearman’s rank correlation based on the original values. Lymphocytes – 1K/µl, CRP – mg/dl
and ferritin – µg/ml. (A) CRP was highly correlated with ferritin levels in blood while
(B)lymphocytes were inversely correlated with ferritin levels. RS spearman’s rank
correlation. Linear regression line is presented as a solid line.
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A B
C
Figure S4: Correlation between inflammatory risk factors CRP, Ferritin. All values were
normalized to ranking values correlation was calculated using spearman’s rank correlation
based on the original values. CRP – mg/dL and ferritin µg/ml. CRP (A) and ferritin (B) were
found to be correlated with RBD-specific antibody levels. RS – spearman’s rank correlation.
Linear regression line is presented as a solid line. The association between D-dimer and RBD-
specific antibodies was tested using nonparametic Mann-Whitney test. (ns p > 0.05).
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A
B
Figure S5: Association between age (A), gender (B) and RBD-specific antibodies in recovered
COVID-19 patients. Age association was tested by spearman’s rank correlation (RS) and
gender by nonparametic Mann-Whitney test. (ns p > 0.05, * p
0.05).
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Figure S6: Representative example of fluorescence-activated cell sorting (FACS) of
PBMC from COVID-19 recovered patient. PBMCs were enriched for B cells by negative
selection using EasySep magnetic beads followed by FACS to isolate antigen-specific mBC
(upper panel - CD19+CD20+CD27varRBDdouble positive) and antigen-specific plasmablasts (lower
panel CD19+CD20-CD27highCD38highRBDdouble positive). Frequencies of B cell subsets were
calculated per total CD19+ B cells.
Symptomatic
Recovered
Median ages
69 (35-95), n=54
55.5 (22-83), n=56
Gender
Female
32.07% (n=17)
48.3% (n=29)
Male
67.93% (n=36)
51.7% (n=31)
Median DFS
13 (0-60), n=53
70 (41-135), n=45
Laboratory findings
CRP (mg/dL)
2 (0-34.5), n=51
1.2 (0.1-36), n=27
Lymphocytes (1000/µL)
1.2 (0.5-10.5), n=51
1.1 (0.4-3.3), n=35
Ferritin (µg/mL)
NA
508.5 (11-2865), n=22
D-Dimer (ng/mL)
NA
836 (109-8028), n=21
Underlying medical conditions
Hypertension
NA
39.6% (n=48)
Dyslipidemia
NA
41.7% (n=48)
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Table S1: Summary of enrolled patients to the study. For each parameter the number of
patients is different as not all data was available. Over all 54 symptomatic patients and 57
recovered patients were enrolled. 26 control sera sample were used from a retrospective serum
bank available in the laboratory.
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... Previous reports indicated that NAb titers decrease with time, whereas specific memory B and T cells can be maintained for 6 to 8 months in convalescent COVID-19 patients. [52][53][54] Here, we assessed MTC responses in 36 participants by detecting the production of IL-2 and IFN-γ, which are biomarkers of host immunity against intracellular pathogens, including SARS-CoV-2. 55 We found that SARS-CoV-2-specific IL-2-or IFN-γ-producing cells were variable in all participants. ...
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Global COVID-19 vaccination programs effectively contained the fast spread of SARS-CoV-2. Characterizing the immunity status of returned populations will favor understanding the achievement of herd immunity and long-term management of COVID-19 in China. Individuals were recruited from 7 quarantine stations in Guangzhou, China. Blood and throat swab specimens were collected from participants, and their immunity status was determined through competitive ELISA, microneutralization assay and enzyme-linked FluoroSpot assay. A total of 272 subjects were involved in the questionnaire survey, of whom 235 (86.4%) were returning Chinese individuals and 37 (13.6%) were foreigners. Blood and throat swab specimens were collected from 108 returning Chinese individuals. Neutralizing antibodies against SARS-CoV-2 were detected in ~90% of returning Chinese individuals, either in the primary or the homologous and heterologous booster vaccination group. The serum NAb titers were significantly decreased against SARS-CoV-2 Omicron BA.5, BF.7, BQ.1 and XBB.1 compared with the prototype virus. However, memory T-cell responses, including specific IFN-γ and IL-2 responses, were not different in either group. Smoking, alcohol consumption, SARS-CoV-2 infection, COVID-19 vaccination, and the time interval between last vaccination and sampling were independent influencing factors for NAb titers against prototype SARS-CoV-2 and variants of concern. The vaccine dose was the unique common influencing factor for Omicron subvariants. Enhanced immunity against SARS-CoV-2 was established in returning Chinese individuals who were exposed to reinfection and vaccination. Domestic residents will benefit from booster homologous or heterologous COVID-19 vaccination after reopening of China, which is also useful against breakthrough infection.
... SARS-CoV-2 spike (S) protein specific memory B cells detected in recovered individuals are considered to be related to virus neutralization and have protective value [46][47][48]. For this reason, memory B cells are considered as a key component of long-lived immunity against SARS-CoV-2 infection [49,50]. ...
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... 25, 26 The level of S-specific memory B cells remained stable for more than 5 months after the infection and get associated with viral neutralization, unlike antibodies. 27 In normal conditions, resting (RM) subset of memory B cells is prevalent but decreases during many viral infections. A recent study also found that severe COVID-19 infection-activated (AM) and tissue-like (TLM) subsets were significantly increased. ...
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