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Genetic diversity of Tamarindus indica populations: Any clues on the origin from its current distribution?

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Tamarindus indica is a domesticated species of high economic value for the Sahel region. Despite this importance, very few data is available on its diversity as well as its structure leading to controversial discussions on its origin. Thus it is questionable whether the knowledge of its genetic diversity and organisation may help in identifying the area of its origin. We have studied 10 populations using markers RAPDs with the seeds collected from Asia (India and Thailand), Africa (Burkina Faso, Senegal, Kenya and Tanzania), from three islands (Madagascar, Réunion and Guadeloupe). The results showed that T. indica has a high intra population genetic variability with a higher value obtained in the population from Cameroon. This high intra-population variability did not allow us to determinate the origin of the species. However, if we take into account the paleontological and anthropological results, we can assume that T. indica has an African origin.
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African Journal of Biotechnology Vol. 6 (7), pp. 853-860, 2 April 2007
Available online at http://www.academicjournals.org/AJB
ISSN 1684–5315 © 2007 Academic Journals
Full Length Research Paper
Genetic diversity of Tamarindus indica populations:
Any clues on the origin from its current distribution?
Boukary Ousmane DIALLO1*, Hélène, I. JOLY2, Doyle McKEY3, Martine HOSSAERT-
McKEY3 and Marie Hélène CHEVALLIER2
1 DPF/INERA/CNRST 03 BP 7047 Ouagadougou, Burkina Faso.
2CIRAD-Forêts TA 10 / C Campus International de Baillarguet 34398 Montpellier Cedex 5 France.
3CEFE/CNRS 1919 Route de Mende, 34293 Montpellier Cedex 5 France.
Accepted 6 October, 2006
Tamarindus indica is a domesticated species of high economic value for the Sahel region. Despite this
importance, very few data is available on its diversity as well as its structure leading to controversial
discussions on its origin. Thus it is questionable whether the knowledge of its genetic diversity and
organisation may help in identifying the area of its origin. We have studied 10 populations using markers
RAPDs with the seeds collected from Asia (India and Thailand), Africa (Burkina Faso, Senegal, Kenya and
Tanzania), from three islands (Madagascar, Réunion and Guadeloupe). The results showed that T. indica
has a high intra population genetic variability with a higher value obtained in the population from
Cameroon. This high intra-population variability did not allow us to determinate the origin of the species.
However, if we take into account the paleontological and anthropological results, we can assume that T.
indica has an African origin.
Key words: Tamarindus indica, RAPDs markers, genetic diversity origin.
INTRODUCTION
Human migrations and/or exchanges have promoted the
worldwide distribution of numerous plant species, such as
wheats, rice, maize, potato, and citrus (Brush et al.,
1995; Hamon et al., 1999; Nicolisi et al., 2000). Selection
has produced specialized phenotypes with genetic differ-
entiation between cultivated forms and their wild rela-
tives. The organization of the genetic diversity of these
widespread domesticated plants has been studied and
their centres of origin identified in many cases (FAO,
1996). For tree species of lesser current economic impor-
tance little information is available and doubts remain
regarding the area of origin of some widespread species.
This knowledge is of importance for developing efficient
in situ conservation strategies (Chevallier 1999).
*Corresponding authors E-mail: ousboukdiallo@yahoo.fr.
Tamarindus indica is widely distributed in dry parts of
Africa and tropical Asia and has been recently introduced
into South America, as well as into the Antilles
(Guadeloupe) and the Indian Ocean (La Réunion). The
periods of these introductions are still unknown and the
precise origin of this species is still a subject of
controversy (Lefévre, 1971; El-Siddig et al., 1999; Grollier
et al., 1998) claimed that it originated in Africa and was
introduced into India at an early date, whereas Wunderlin
(1998) and Poupon and Chauvin (1983) assumed that its
origin is in Asia particularly in India, because of its
appelation "Tamar hindi” which when translated means
“Indian date" and owing to the fact that Marco Polo in his
writings quotes its presence into 1298 and the boudhists
sources make noted it 650 years AV J.C.
The spatial distribution of genetic diversity could yield
clues to resolve these uncertainties. Introduction events
are often associated with a population bottleneck, which
should reduce genetic diversity (Citation). The short time
elapsed since introductions should not have been suffici-
854 Afr. J. Biotechnol.
ent for mutation to counter such reduction in diversity
(Citation). The diversity in an area of introduction should
thus be a subset of initial diversity (Citation).
The main objectives of this study were i) to estimate the
genetic diversity of T. indica and ii) to evaluate whether
patterns in the organization of this diversity can provide
clues as to the area of origin of the species. In order to
address these questions we assessed the genetic
diversity of 10 populations of T. indica, distributed over its
range with Random Amplified Polymorphic DNA (RAPD)
markers, which have proved useful for estimating genetic
diversity especially for previously unstudied taxa when
DNA sequence information are not available (Williams et
al., 1990). RAPD analysis has been widely used in asse-
ssing the genetic diversity of populations of a large
number of trees, including tropical species (Bekessy et
al., 2002; Cardoso et al., 1998; Dawson and Powell,
1999; Degen et al., 2001; Gillies et al., 1997; Heaton et
al., 1999; Lee et al., 2002; Lowe et al., 2000).
MATERIALS AND METHODS
Knowledge on T. Indica
T. indica L. is a semi-evergreen tree which can reach up to 20 m in
height. It is a member of the family Fabaceae (Leguminosae), which
is the third largest family of flowering plants with 700 genera and
approximately 17,000 species (Chant, 1993). It belongs to the
subfamily Caesalpinioideae, which can be divided into five to nine
tribes or groups of genera based on the morphological characters.
In the Bentham’s classification (Pettigrew and Watson, 1977),
tamarind belongs to the tribe of the Amherstieae Benth. According
to Léonard (1957), the Amherstieae comprises 25 genera in total,
21 in tropical Africa, two in tropical America and two in Asia. There
are only three relic Afro-Asiatic genera within the group, namely
Humboldtia, Tamarindus and Amherstia. Both Tamarindus and
Amherstia are more derived, with zygomorphic and showy flowers
and stamen filaments connate in a sheath, but have many
differences in the floral structure, leaves, fruits and seeds. These
genera are isolated from each other and from the main part of the
tribe, centred in western Africa (Polhill and Raven, 1981).
Tamarindus is said to have some resemblance to Heterostemon
Desf. from the upper Amazon region of South America. No other
tree bearing any resemblance to tamarind has been reported in
other countries (Dassanayake and Clayton, 1999). The genus
Tamarindus contains only one species (monotypic genus). It is a
diploid species with a chromosome number of x = 12 and 2n = 24
(Purseglove, 1987; El-Siddig et al., 1999).
Plant material and DNA extraction
Seeds were collected from 10 trees (Guadeloupe) to 30 trees
(Kodiena, Burkina Faso) in eight natural or naturalised plantations
and two planted stands of T. indica covering a large part of the
current range of the species (Table 1). For the populations of
Cameroon, India and Senegal the number of trees was not
specified by the seed centres.
The seeds were allowed to germinate in polycarbonate boxes
containing sand and young seedlings were kept in an incubator at
37°C. Total DNA was extracted from 150 mg of foliar tissues from
fifteen-day-old seedlings following the protocol of Bousquet et al.
(1990). The integrity of the DNA was estimated on agarose gels
and the quantity was determined using a fluorimeter DNA was then
diluted in sterile water to a concentration of 5 ng/µl for use in
amplification reactions.
RAPD analyses
Fifteen primers were screened to identify suitable primers for RAPD
analysis, using five individual samples from different provenances.
Eight primers able to detect distinct, clearly resolved and
polymorphic amplified products were selected for further analysis.
PCR was carried out in a final volume of 25 µl containing 10 mM
Tris (pH 8.0), 50 mM KCl, 2 mM MgCl2, 0.1 mM of each dNTP, 0.56
µM of primer, and 1 unit of Taq DNA polymerase. Amplification of
RAPDs was performed on a Perkin-Elmer thermocycler using the
following PCR conditions: an initial denaturation step at 94°C for 4
min, followed by 45 cycles each at 94°C for 1 min, 36°C for 1 min,
72°C for 2 min and a final extension step at 72°C for 2 min.
Negative controls, in which DNA was omitted, were included in
each run. Amplification products were separated by electrophoresis
on 1.8% agarose gels run in 1X TBE (Tris-Borate-EDTA) buffer,
stained with ethidium bromide, visualised and photographed under
UV light.
Scoring of bands and statistical analysis
Amplified bands were scored present (1) or absent (0) regardless of
band intensities. Ambiguous data were scored as missing data. We
analysed the data on three levels of comparison: among
individuals, among populations and among areas.
Ressemblances/differences among individuals
The Sokal and Michener index of similarity S (Sokal and Sneath,
1963) was calculated between all individuals, using the software
NTSYS-PC (Rohlf, 1993). The value of this index varies between 0
(two individuals not having any common marker) to 1 (two
individuals showing identical banding patterns). The matrix of
similarities allowed us to calculate the matrix of genetic distances
(1-S). A neighbor-joining (NJ) dendrogram was then constructed
from these distances using the software DARwin 3.6 (Perrier et al.,
1999). We performed a first analysis in order to quantify genetic
variability within the potential native range of T. indica, and then
added planted individuals and individuals from populations of recent
introduction.
Quantification and comparison of population diversity
The Shannon index (HS=- pi ln pi) and Nei’s index (H=n(1- pi2)/n-
1) where pi (in both indices) is the frequency of the ith RAPD band,
as well as the percentage of polymorphic loci (P) at the 0.99
criterion were calculated for each population using Popgen 1.32
(Yeh and Boyle, 1997). Calculation of P is a heuristic approximation
for these dominant markers. It is not known whether bands at a
particular level correspond to a single locus. Furthermore, only two
“alleles” are possible, ‘present’ and ‘absent’. The population
genetic structure FST was computed using AFLP-SURV 1.0
(Vekemans, 2002) following Lynch and Milligan (1994) instead of
ST normally applied during AFLP data analysis.
Comparison among areas
To examine differences among areas (East Africa, West Africa,
Cameroon, Réunion and Guadeloupe) we grouped individuals with-
Diallo et al. 855
Table 1. T. indica samples studied for RAPD analysis. N denotes the sample size for seeds and
Nb denotes the sample size of female donor trees of each population.
Country Population name Population type Nb trees N seeds
Burkina Faso Kodiena Natural 30 18
Cameroon Maroua Natural - 16
Kenya Gédé Natural 25 16
Senegal Pamene Natural - 18
Tanzania M’tandika Natural 22 18
Guadeloupe Mahaudière Planted 10 21
India Dehra Dun Natural - 24
Madagascar Anarafaly Natural 15 22
Réunion Etang sale Natural 16 21
Thailand Bangkok Planted 10 12
in each area as an entity and calculated distances of Nei using the
software AFLP-SURV 1.0 (Vekemans, 2002). Robustness of the
nodes was evaluated by bootstrap (2000 replicates). We used the
Neighbor and Consense procedures of the Phylip95 software
package (Felsenstein, 1993) to construct the dendrogram and infer
boostrap confidence on tree branches.
RESULTS
Intra-population genetic diversity
The eight primers used to screen RAPD diversity of T.
indica populations generated 58 polymorphic amplifica-
tion fragments across the whole sample. (Table 2) lists
the polymorphic primers, their sequences and the num-
ber of polymorphic markers found in the 10 populations
(Table 3). We obtained 5 to 10 fragments per amplifica-
tion with an average of 7.25. Marker 1 is fixed in Guade-
loupe, polymorphic in Thailand and India and completely
absent from the other populations (Figure 1). The
percenttage of polymorphic loci ranged from 39.7% for
Thailand to 77.6% for Cameroon with a mean of 69.3 for
the African populations. The average within-population
diversity was 0.28 and 0.31, respectively, over all popula-
tions and the African populations.
Inter-population genetic diversity
The dendrogram of individuals from populations of the
potential native range (Figure 2) exhibits three groups:
the first group includes the eastern African populations
along with the populations from Madagascar and from
India, the second group comprises the western African
populations and the individuals from Cameroon form a
third group (Figure 2). The same analysis carried out with
only the five African populations, groups the Came-
roonian individuals in a cluster with those from West
Africa; Kenyan and Tanzanian individuals form two other
groups (Figure 3). The among-populations, genetic
diversity was 0.09 for these five populations with FST =
Table 2. Polymorphic primers and number of polymorphic
markers obtained.
Name of
primer Sequence of primer
(5’ to 3’)
No. of polymorphic
markers
OPA-A09 GGGTAACGCC 10
OPA-B06 TGCTCTGCCC 7
OPA-K06 CACCTTTCCC 6
OPA-K17 CCCAGCTGTG 9
OPA-R15 GGACAACGAG 6
OPA-W01 CTCAGTGTCC 8
OPA-X01 CTGGGCACGA 7
OPA-Y01 GTGGCATCTC 5
Total 58
Table 3. Estimates of genetic diversity for T. indica.
Population P HS H
Burkina Faso 65.5 0.325 (0.281) 0.216 (0.199)
Cameroon 77.6 0.429 (0.262) 0.290 (0.186)
Guadeloupe 63.8 0.312 (0.283) 0.207 (0.198)
India 72.4 0.345 (0.268) 0.227 (0.188)
Kenya 75.9 0.401 (0.271) 0.270 (0.193)
Madagascar 60.3 0.326 (0.295) 0.221 (0.208)
Réunion 67.2 0.370 (0.289) 0.251 (0.205)
Senegal 60.3 0.334 (0.299) 0.227 (0.211)
Tanzania 67.2 0.351 (0.287) 0.236 (0.205)
Thailand 39.7 0.219 (0.287) 0.148 (0.200)
100.0 0.521 (0.180) 0.350 (0.144)
P, percentage of polymorphic loci; HS, mean Shannon diversity
index; H, Nei’s diversity index.
Values in parentheses denote standard deviations.
0.23, highly significant (P < 0.001).
856 Afr. J. Biotechnol.
Tanzania Senegal Burkina Faso
Guadeloupe Cameroon Madagascar
OPA-K06
750 pb
Thaïland Kenya India
OPA-K06
310 pbe
Figure 1. RAPD profiles obtained after amplification of 9 populations of Tamarindus indica with OPA-KO6 after
separation on a 1.8% agarosse gel. The size marker included was 1 Kb DNA Ladder.
Figure 2. Dendrogram of the populations from native range of T. indica, generated by neighbor joining cluster analysis of Sokal
and Michener distances. Bf: Burkina Faso; Cm: Cameroon; Id: India; Ky: Kenya; Md: Madagascar; Sn: Senegal; Tz: Tanzania.
The individuals from the potential native range that
were grouped into three clusters were analyzed again
with the individuals of the population from Thailand,
which are planted, and the individuals from Guadeloupe
and Réunion, which are from naturalised populations
resulting from recent introductions. The dendrogram
(Figure 4) shows that individuals from the Réunion are
grouped with the western African individuals with a
statistically strong bootstrap value (72%); the individuals
from Thailand and Guadeloupe form a cluster which is
closest to those from Cameroon but with a lower boot-
strap value (44%); the individuals from eastern Africa,
Madagascar and India are the most different from all the
others (bootstrap value of 68%). Thus, a factorial analysis
Diallo et al. 857
Figure 3. Dendrogram of the African populations generated by neighbour joining cluster analysis of Sokal and
Michener distances. Bf: Burkina Faso; Cm: Cameroon; Ky: Kenya; Sn: Senegal; Tz: Tanzania.
East
West
Réunion
Cameroon
Thailand
Guadeloupe
72
44
63
68
Figure 4. Dendrogram of the various areas considered, constructed
using neighbour joining method. Bootstrap values are indicated for
each corresponding node (2000 replicates) East: Kenya, Tanzania,
Mada-gascar and India; West: Burkina Faso, Senegal.
of correspondence (AFC) (Figure 5) showed the same
structuring of populations in addition to predominant
markers associated with each group.
DISCUSSION
Presumed origin of T. indica
The high intra population variability from the populations
of the presumed origins of T. Indica do not allow for
confirmation of the geographical origin of the species
between Africa, Madagascar and India, as the sampling
was small in Asia and Madagascar. In fact, Polhill and
Raven (1981) who studied the centre of diversity of some
Leguminosae tribes measured by the percentage of the
total number of genera that are endemic to each region
showed that out of the 25 genera of Amhertieae (Tam-
arindus tribe), 23 are endemic to Africa and Madagascar,
and only two to Asia and America, respectively. However,
our findings reinforce paleontological observations cond-
ucted in the tertiary sediments in the south and centre-
north of Tanzania respectively, that revealed the presen-
ce of the pollen related to five genera of Caesalpinioideae
(Brachystegia; Cassia-type didymobotrya; Cassia-type
italica; Isoberlinia and Jubernardia-type paniculata) (Vin-
cens et al., 2003; Herendeen and Jacobs, 2000).
According to Polhill and Raven (1981) three of these
genera were encountered in the south of central Africa in
Guineocongolese forest. However, none of these studies
mentioned the Tamarindus genus suggesting a very late
migration to this zone.
Genetic diversity and origin of newly introduced
populations
In general, T. indica displays a high genetic diversity (H =
0.38), the value of this species is higher than values
obtained with isoenzymes for tropical rain forest species
(H = 0.11) (Hamrick and Loveless, 1986) and for
Australian Acacia species (0.07 to 0.20) (Moran et al.,
1989a,b; Coates,1988), or for coniferous species (H =
0.27) (Miton, 1983). In turn, the diversity value of T. indi-
ca is close to the values reported for Fadherbia albida in
tropical arid zones (Joly et al., 1992; Harris et al., 1997)
and Prunus africana (Dawson and Powell,1999). Results
obtained in this study are congruent with published stud-
ies on other African tree species which indicate a high
level of among populations diversity (Lowe et al., 2000),
858 Afr. J. Biotechnol.
Plan 1/2
- 0 .8
0
0. 8
- 0 . 8 0 0 .8
a xe 1
Guadeloupe Cam e roun Madagascar Thailande Kenya
Inde Tanzanie Ségal Burkina Réunion
Plan 1/3
-0.8
0
0.8
-0.8 0 0.8
axe 1
axe 2
Guadeloupe Cameroun Madagascar Thailande Kenya
Inde Tanzanie Sénégal Burkina Réunion
Figure 5. Analyzes Factorial correspondences (AFC) on the individuals (provenances) in
plans 1/2 and 1/3.
and a high differentiation between East African and West
African populations on Prunus africana (Dawson and Powell, 1999), Faidherbia albida (Harris et al., 1997) and
Acacia senegal (Unpublished data Dolmia).
A partial analysis performed on populations coming
from the presumed natural distribution of the species
(Africa, Madagascar, India) revealed its structure per
geographic great region. The partial analysis including
only African populations shows a high differentiation bet-
ween populations from West and East of the continent.
Such differentiation has already been found with other
species like F. albida (Joly et al., 1992; Rendell, 1998),
Ivirginia gabonensis and I. wombolu (Lowe et al., 2000).
This differentiation may presumably stem from the role
that the Rift valley might have played in stopping gene
flow between the two regions of the continent both in
terms of seed dispersion and those induced by human
exchanges and migration. Moreover, it should be noted
that the population from Cameroon displayed the highest
genetic diversity value (H = 0.77). This was also found in
bush mango (Lowe et al., 2000). The high variability in
the Cameroonian population can be explained by two
plausible reasons, namely Maroua had been a com-
mercial point between Sub-saharan Africa and India via
the Mahgreb using the Sahara road as emphasized by
Omer-Cooper et al. (1968), and Cameroon could have
been a primary center from which the species migrated
toward the other regions of the continent with favorable
conditions for its growth.
The two genetically close West African populations pre-
sented high intra population diversity that contrast with
findings of Chevallier et al. (1994) on Senegal popula-
tions of A. senegal. However, the contradictory results
may be linked to the commercial exchanges in the sub-
region favoured either by Dioula merchants of nowadays
Mali or via the massive displacements of human cara-
vans during transhumance, nomadism and wars. In fact,
Omer-Cooper et al. (1968) noted that in the 19th century
Fulani (Peulh) conducted many Jihads in the region. The
best known example is that of Utsman Dan Fodio in the
State of Gobir whose forefathers came from Fouta Toro
in actual Senegal. After the fall of the empire, an impor-
tant part of his fellows went to the northern part of
Burkina Faso to create the Liptako. During this second
migration, seeds originating from Senegal may have
been introduced via Gobir State. Afterward, hybridization
of the populations might have happened with the local
populations. The second hypothesis is that it might be
only one population that never differentiated, because
they are geographically isolated. That did not allow the
drift effect to impact on populations.
Genetic differentiation of La Réunion from West Afri-
ca, and genetic differentiation of Guadeloupe from
Thailand populations
Results obtained after analysis of populations from the
natural distribution and areas of recent introductions sug-
gest that the population of Réunion Island comes from
Diallo et al. 859
West Africa. With the discovery of the Island in 1500 by
Tristan Da Cunta, the possibilities for Vanilla and sugar
cane production led to a need for labour, therefore the
first French migrants recruited cheaper labour on the
western coasts. These workers may have transported
with them seeds of tamarind tree. However, material
could have been introduced by Arab merchants who follo-
wed the Spanish explorers of the island since medieval
times and may have transported seeds to the island.
Even though not inhabited, the island was the way to the
Indies and may have served as a stop point for boats
coming from the western African coasts because the
reports relating to the company of Indies (1711) ment-
ioned the presence of this species on the island (Lacou-
ture).http//perso.wanadoo.fr/daniel.lacouture/divers/dossi
er/nature/culture/nature020/
From this analysis it was also evident that the popu-
lation of Guadeloupe comes from Thailand. These two
populations present also a low genetic diversity compa-
red to the populations from the natural distribution area of
the species. This may be due to the fact that the planted
trees came from seeds collected on a low number of
individuals. The differentiation between the two popula-
tions of East Africa (Tanzania and Kenya) is probably due
to either natural and/or ethnic barriers (i.e. wars and
plundering without occupying the conquered lands) that
stopped human movements and indirectly the exchanges
of vegetal material.
In conclusion, the intra population variation observed,
as well as the low sample number of Asian populations
did not allow for clarity on the origin of T. indica. How-
ever, the observed genetic diversity within the African
populations shows that there are no risks of genetic ero-
sion in the short term. Molecular analyses based chloro-
plastic DNA maternally inherited characteristics may help
to understand the mode of dissemination of T. indica.
ACKNOWLEDGEMENTS
The field and laboratory works of this study were spon-
sored by the International Foundation of Science (IFS),
CIRAD-Forêts and the French cooperation mission.
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... El-Siddig et al. (2006) évoquent également qu'il serait originaire des zones des savanes sèches de l'Afrique tropicale aux vues d'une faible variabilité morphologique observée au sein de la population de cette zone. Enfin, pour certains auteurs (Maydell, 1990;Grovel, 1993;Diallo et al., 2007), il serait originaire de Madagascar. Cependant, l'espèce a été connue et cultivée en Égypte dès 400 ans avant Jésus Christ. ...
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The tamarind tree (Tamarindus indica L.), widespread in the tropics, is a multipurpose fruit species that has been the subject of several studies. The present bibliographical synthesis makes an inventory of the existing studies on the tamarind tree. Specifically, it is aims at: presenting the state of the art of the publications from the bibliographic resource, making the history and the description of tamarind, characterizing the distribution and the structure of the populations, listing the various uses and the valorization of the species and highlighting the socio-economic importance. Scientific publications on tamarind were searched using Harzing’s Publish or Perish database which allowed to gather publications from Crossref, Google scholar and Pubmed engines using keywords related to T. indica together and individually. The bibliographic resource also involved the Bielefeld Academic Search Engine, Science direct and some physical documents. Globally 112 publications were retained out of a total of 1300 recorded. These publications were classified into seven themes. The most common topics are biological and pharmacological activities, history and description of the species, use and valorization, representing respectively 29%, 22% and 20% of the proportions of the publications concerned. The least developed topics in research are management and conservation methods and socio-economic importance. Keywords: Tamarindus indica, uses, conservation, knowledge needs
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Bael (Aegle marmelos (L) Correa) is an important underutilized fruit crop of India. A total of 25 bael trees were selected from 356 bael trees of Sakharayapattana in Chikkamagalur district, Karnataka, India based on the fruit morphological traits (fruit weight, pulp weight, skull thickness, seed weight per fruit, No. of seeds per fruit, No. of locules per fruit, No. of seeds per locule, pulp wt. : seed wt.). These 25 trees were evaluated for phenotypic and genotypic variations using random amplified polymorphic DNA (RAPD) and inter-simple sequence repeats (ISSR) markers. RAPD and ISSR markers showed significant polymorphism among the trees. Jaccard’s genetic similarity value of RAPD and ISSR was found in the range of 0.00–0.95 and 0.06–0.56, respectively suggesting a moderate level of genetic diversity. The present study revealed that molecular markers can be successfully utilized for determining genetic diversity and relationship of bael trees for further varietal improvement.
... A number of studies laid the foundations for domestication, by clarifying the role of fruit trees for rural livelihoods (Leakey and Simons 1998;Schreckenberg et al. 2006;Faye et al. 2010Faye et al. , 2011Leakey et al. 2012) and setting priorities for domestication (Franzel et al. 2008). During the last four decades, attempts have been made to develop techniques for vegetative propagation (Sanou et al. 2004;Verheij 2004;Hartmann et al. 2007), management of genetic resources (Rao and Sthapit 2012;Ahuja and Ramawat 2014) and genetic improvement through establishment of provenance trials and using molecular markers (Sina 2006;Diallo et al. 2007 ...
... The simplicity of laboratory assay for RAPD markers makes them an attractive method for obtaining intraspecific distinctions. This technique is already used for cultivar identification and genetic variability analysis of several underutilized fruit crops like tamarind (Diallo et al., 2007) and bael (Nayak et al., 2013). In this study, a set of RAPD primers were used for distinguishing the superior trees of bael. ...
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Bael (Aegle marmelos (L) Correa) is an important underutilized fruit crop of India. A total of 25 bael trees were selected from 356 bael trees of Sakharayapattana in Chikkamagalur district, Karnataka, India based on the fruit morphological traits (fruit weight, pulp weight, skull thickness, seed weight per fruit, No. of seeds per fruit, No. of locules per fruit, No. of seeds per locule, pulp wt. : seed wt.). These 25 trees were evaluated for phenotypic and genotypic variations using random amplified polymorphic DNA (RAPD) and inter-simple sequence repeats (ISSR) markers. RAPD and ISSR markers showed significant polymorphism among the trees. Jaccard’s genetic similarity value of RAPD and ISSR was found in the range of 0.00–0.95 and 0.06–0.56, respectively suggesting a moderate level of genetic diversity. The present study revealed that molecular markers can be successfully utilized for determining genetic diversity and relationship of bael trees for further varietal improvement.
... Tamarind products are widely used in Asia, america and africa as health remedies. Tamarind derivatives, seeds,leaves, fruits were commonly used in the Indian ayurvedic system of medicine and indigenous african medicine (6,7). Ancient Sanskrit literature discusses the therapeutic benefits of tamarind. ...
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Introduction: Tamarindus indica L also recognized as Tamarind is a common plant species in the Indian subcontinent. Tamarind derivatives are widely used in Asia, african and south american nations as medical treatments. In ancient indian medicine and african traditional medicine ,tamarind ingredients, seeds, fruits , and leaves have been commonly used.Aim : The study aimed to assess knowledge amongst dental students of the medicinal effects of Tamarindus indica.Materials and method: A cross-sectional analysis with a self-administered questionnaire was performed, with Ten questions distributed among 100 dental students. In medical applications, the questionnaire measured understanding of Tamarindus indica treatment, its anti inflammatory properties, anti-lipedemic properties, anti-pyretic activity, and its phytocompound action mechanism. We reported and evaluated the responses.Results: 21% of the respondents were aware of the medicinal applications of Tamarindus indica therapy.15% were aware of the anti inflammatory of Tamarindus indica therapy. 13% were aware of the anti lipedemic activity of Tamarindus indica therapy.10% were aware of the anti pyretic activity of Tamarindus indica therapy.8% were aware of the mechanism of action of phytocompounds of Tamarindus indica therapy.Conclusion: There is limited awareness amongst dental students about the use of Tamarindus indica therapy in medicinal applications. Increased awareness campaigns and dental education initiatives coupled with increased value for curriculum changes will further improve knowledge and understanding of Tamarindus indica therapy.
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There is scanty information on tamarind’s genetic diversity in Easter Kenya. The objective of this study was to determine the genetic diversity of 64 tamarind accessions from Eastern Kenya using 12 Inter Simple Sequence Repeat (ISSR) markers. DNA was extracted from the young apical leaves using modified CTAB method and amplified using standard PCR. The data collected were scored as presence (1) or absence (0) of bands then compared to the 100bp ladder and analyzed using GeneAlex and R softwares. Only seven primers produced reproducible bands. A total of 46 alleles were produced for the 7 loci with an average of 6.6 per loci. Polymorphic information content (PIC) varied from 0.72 to 0.89 and genetic diversity varied from 0.74 to 0.9. The ISSR markers revealed effective polymorphism of 40.87 to 99.46% and the band sizes varied from 100 to 1000 bp. Analysis of Molecular Variance (AMOVA) depicted high variation within the tamarind populations at 90% and the least variation of 10% among the population. The first 3 components of Principal coordinate analysis (PCoA) contributed 40.83% of the total variation. Hierarchical cluster analysis grouped the tamarind accessions into seven major distinct groups. Tamarind accessions were different within counties with minimal variations among counties, proving that genetic diversity exists among the tamarind accessions in the Eastern region of Kenya. High genetic diversity was evident among Embu accessions and least among Masinga accessions. Diversity in tamarind can be utilized in marker-assisted breeding and primer ISSR17899A and ISSRHB11 can be explored in studying genes that code for various traits in tamarind accessions.
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This datasheet on Tamarindus indica covers Identity, Overview, Associated Diseases, Pests or Pathogens, Distribution, Dispersal, Biology & Ecology, Environmental Requirements, Natural Enemies, Impacts, Uses, Management, Genetics and Breeding, Food Quality, Food Safety, Economics, Further Information.
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Among the 3,000 species of the edible fruits in the tropics about 10% are more or less regularly cultivated as crop plants. This leaves more than 90% potentially useful, however, and may be gathered or cultivated to a limited extent for use as food or income source. One of these species is tamarind, Tamarindus indica L., an evergreen legume, native to the dry savannah of tropical Africa and growing wild throughout the Sudan. The much-appreciated qualities of the fruit and the adaptability of the tree to different soils and climates widened its distribution all over the tropics and subtropics. Despite this, very little is known about the tree phenology, floral biology, husbandry or genetic diversity. In this article we have aimed to bring out detailed information on various aspects of its origin, botany, ecology, propagation and cultivation, genetic improvement and main uses. In addition we reviewed the horticultural characteristics of tamarind and assessed its likely potential for further development in the Sudan.