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Ontogenetic and interspecific valve shape variation in the Pinnatae group of the genus Surirella and the description of S. lacrimula sp. nov

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The morphology and ontogenetic allometric trends of several taxa in the Pinnatae group of Surirella were studied using traditional morphometrics, landmark-based shape analysis, and light and electron microscopy. We investigated separately two groups of species: the first consisted of S. brebissonii Krammer & Lange-Bertalot, S. brebissonii var. kuetzingii Krammer & Lange-Bertalot and S. ovalis Brébisson, and the second included specimens originally identified as S. minuta Brébisson and S. pinnata W. Smith. Morphological variability within both groups was mainly limited to differences in valve shape and size. Landmark-based shape analysis revealed several shape groups within both species complexes, although these shape groups were not separated by clear gaps. Additional groups of specimens were separated on the basis of different ontogenetic allometric trajectories. In both species complexes, valve shapes converged at later stages of the vegetative life cycle. Within the ‘S. brebissonii–S. ovalis’ species complex, one shape group corresponded to S. ovalis and another to S. brebissonii+S. brebissonii var. kutzingii. The latter two varieties had similar average shape, but differed in their ontogenetic trajectories. In samples from the USA, only representatives of S. ovalis and S. brebissonii var. kutzingii were found. In the ‘S. minuta–S. pinnata’ species complex, three distinct shape groups were found. One of these is described here as a new species, S. lacrimula English and two others corresponded to S. minuta and S. pinnata. We suggest, therefore, maintaining these two previously synonymized species as separate taxa.
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Ontogenetic and interspecific valve shape variation
in the Pinnatae group of the genus Surirella and the
description of S. lacrimula sp. nov.
Jonathan David English a & Marina G. Potapova a
a Diatom Herbarium, Academy of Natural Sciences of Philadelphia, Philadelphia, PA, USA
Available online: 16 Dec 2011
To cite this article: Jonathan David English & Marina G. Potapova (2012): Ontogenetic and interspecific valve shape variation
in the Pinnatae group of the genus Surirella and the description of S. lacrimula sp. nov., Diatom Research, 27:1, 9-27
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Diatom Research
Vol. 27, No. 1, March 2012, 9–27
Ontogenetic and interspecific valve shape variation in the Pinnatae group of the genus Surirella
and the description of S. lacrimula sp. nov.
JONATHAN DAVID ENGLISH& MARINA G. POTAPOVA
Diatom Herbarium, Academy of Natural Sciences of Philadelphia, Philadelphia, PA, USA
The morphology and ontogenetic allometric trends of several taxa in the Pinnatae group of Surirella were studied using traditional
morphometrics, landmark-based shape analysis, and light and electron microscopy. We investigated separately two groups of species:
the first consisted of S. brebissonii Krammer & Lange-Bertalot, S. brebissonii var. kuetzingii Krammer & Lange-Bertalot and S. ovalis
Brébisson, and the second included specimens originally identified as S. minuta Brébisson and S. pinnata W. Smith. Morphological
variability within both groups was mainly limited to differences in valve shape and size. Landmark-based shape analysis revealed several
shape groups within both species complexes, although these shape groups were not separated by clear gaps. Additional groups of specimens
were separated on the basis of different ontogenetic allometric trajectories. In both species complexes, valve shapes converged at later
stages of the vegetative life cycle. Within the ‘S. brebissoniiS. ovalis’ species complex, one shape group corresponded to S. ovalis and
another to S. brebissonii +S. brebissonii var. kutzingii. The latter two varieties had similar average shape, but differed in their ontogenetic
trajectories. In samples from the USA, only representatives of S. ovalis and S. brebissonii var. kutzingii were found. In the ‘S. minuta
S. pinnata’ species complex, three distinct shape groups were found. One of these is described here as a new species, S. lacrimula English
and two others corresponded to S. minuta and S. pinnata. We suggest, therefore, maintaining these two previously synonymized species
as separate taxa.
Keywords: allometry, morphometrics, new species, Surirella, shape analysis, USA
Introduction
While working on the online diatom identification guide
‘Diatoms of the United States’ (http://westerndiatoms.
colorado.edu/), we re-evaluated records of the frequently
reported freshwater Surirella species at the Academy of
Natural Sciences of Philadelphia (ANSP) Diatom Herbar-
ium. We found that the identification of species in
the Pinnatae section of Surirella (Peragallo & Peragallo
1897–1908), characterized by a low keel and absence of
alar canals, was particularly inconsistent. One obvious
reason for such inconsistency was the low number of dis-
crete morphological characters useful for distinguishing
species within species complexes in this group. Diatom
species within so-called ‘species complexes’, or groups of
very similar species, rarely differ from each other by dis-
crete morphological characters. New diatom species within
species complexes are often described upon finding gaps in
distributions of their continuous characters, such as valve
dimensions or density of structural elements: striae, fibulae,
costae, etc. (e.g., Mann et al. 2004, Edlund & Soninkhishig
2009, Falasco et al. 2009). Such continuous characters are
also the most commonly used for species identifications
within the Pinnatae section of Surirella, but some species
Corresponding author. Email: english@ansp.org
(Received 16 June 2011; accepted 17 November 2011)
have overlapping ranges of variation for these characters
(e.g., Krammer & Lange-Bertalot 1987).
The second reason for inconsistent identifications was
a tendency for cell shapes to converge near the end of the
cell cycle. For example, Krammer & Lange-Bertalot (1987)
stated that only the large valves of Surirella brebissonii
Krammer & Lange-Bertalot could be distinguished in light
microscopy (LM) from S. ovalis Brébisson, while smaller
valves of two species were indistinguishable. Another
taxon, S. brebissonii var. kuetzingii Krammer & Lange-
Bertalot was based solely on the difference in size range
between it and the nominate variety (Krammer & Lange-
Bertalot 1987). Separating these taxa is thus difficult in
samples in which there are few valves.
Another species complex that caused identification
difficulties, judging from ANSP records, was S. pinnata
W. Smith +S. minuta Brébisson. Krammer & Lange-
Bertalot (1987) synonymized these two species, as reflected
in the ANSP records: most of the earlier records were of
S. pinnata and the later ones of S. minuta. We also noticed
that most USA populations originally identified as S. minuta
differed slightly in their cell proportions from the speci-
mens from either of the two type populations and were on
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10 English & Potapova
average more rounded. These rounded valves resembled
the smaller, rounded valves of S. minuta in shape, but did
not have the same size range as the type population. We
hypothesized that that a quantitative shape analysis may
yield useful characters for separating species within these
two species complexes.
Shape variation within groups of closely related species
may be attributed to several factors: interspecific and
intraspecific genetic differentiation, shape change related
to ontogeny (ontogenetic allometry) and phenotypic plas-
ticity. The usual goal of shape analysis in diatom studies
is to reveal shape groups that may correspond to separate
taxa. Therefore, it is important to take into account other
sources of variation, especially changes that occur during
the vegetative stage of the life cycle. In pennate diatoms,
the reduction in valve length over the life cycle is usually
accompanied by changes in valve proportions and shape
(Geitler 1932), while the numbers of structural elements
(processes, striae) may change with valve length/diameter
in both pennate and centric diatoms. The size-dependent
variation in quantitative characters has long been recog-
nized by diatomists, who have tried to take it into account
by, for example, creating such morphological characters as
ratios of two variables (reviewed in Theriot 1988) or slopes
of regression of one variable against another (R.K. Edgar
et al. 2004, S.M. Edgar & Theriot 2004). This approach is
especially useful when comparing taxa or populations with
similar size ranges and when a linear relationship between
two variables is established. Ontogenetic allometric trends
visualized as plots of various quantitative variables against
cell length (or diameter in centric diatoms) have also been
used to demonstrate morphological differences in closely
related species (e.g., Theriot & Stoermer 1984, R.K. Edgar
et al. 2004, Potapova & Ponader 2004).
The first goal of this study was to clarify taxa bound-
aries by exploring variation in valve shape in two species
complexes: (1) ‘S. ovalisS. brebissonii’ complex, also
containing S. brebissonii var. kuetzingii; and (2) ‘S. min-
utaS. pinnata’ species complex. The second goal was to
update morphological descriptions of species from these
complexes found in North America. Instead of eliminating
shape variability attributed to ontogenetic allometry, our
approach was to use ontogenetic (growth) trajectories as
additional morphological characters. A quantitative anal-
ysis of ontogenetic trajectories of valve shape has rarely
been carried out in the past (but see Stoermer & Ladewski
1982, Mou & Stoermer 1992) because of the difficulties
with extracting valve outlines in the outline-based shape
analysis. The development of landmark-based shape anal-
ysis provides a less laborious alternative to shape analysis
and has already been used in diatom studies (Potapova &
Hamilton 2007, Falasco et al. 2009, Veselá et al. 2009). In
landmark-based methods of shape analysis, landmarks are
placed on structures that are considered homologous across
specimens and the landmark coordinates are recorded. This
allows the use of superimposition techniques that remove
non-shape variation, such as size and orientation of speci-
mens, from the shape variation (Rohlf & Slice 1990). The
extracted shape descriptors can then be used as separate
morphological characters or combined using multivariate
analysis (Bookstein 1996). The sliding semi-landmarks
method is an extension of a standard landmark method
suitable for analyzing outlines (Bookstein 1997).
Materials and methods
Materials examined
The diatom slides and samples investigated in this study
are listed in Table 1. All materials are housed at ANSP.
Most of the materials were collected in the USA, but five
slides represented European collections. The first of these
was WmS64, the isotype slide of S. pinnata from Lewes,
England. The second was HLSEx528, the slide from the
H.L. Smith exsiccati set originally from the Brébisson col-
lection and identified by Brébisson as S. minuta. Although
there is no indication of locality on this slide, it is possible
that this slide represents a syntype, or even an isotype of
this species originally described by Brébisson from Falaise,
France. The other European materials were slide GC11960,
from Longpré, France, originally from P. Petit’s collec-
tion, identified as S. pinnata, slide GC11277 from Strehlen,
Germany, identified as S. pinnata and S. minuta and slide
Feb3448 from the Glasgow Botanical Gardens, Scotland,
identified as S. minuta. In addition, for the shape anal-
ysis, we scanned and used several published images of
specimens from the type populations of S. ovalis (Kram-
mer & Lange-Bertalot 1987: figs 16–20), S. brebissonii
(Krammer & Lange-Bertalot 1987: figs 21–26), S. breis-
sonii var. kutzingii (Krammer & Lange-Bertalot 1987: figs
55–56, 58–68) and S. minuta (Krammer & Lange-Bertalot
1988: Tafel 135, figs 1, 4–5, 10).
Microscopy
For LM, we used a ZEISS AxioImager A1 microscope with
Nomarski optics, equipped with an AxioCam MRm digital
camera. For scanning electron microscopy (SEM), diatom
samples were placed on aluminum stubs, coated with
platinum–palladium, and studied with a ZEISS SUPRA 50
VP FE electron microscope at 10 kV.
Morphometric analysis
Valve shape was characterized using two approaches:
plots of valve width against length and multivariate
landmark-based shape analysis. Valve length and width
were measured from the digital images of specimens
observed in LM and scanned images from other publi-
cations. Three hundred and sixty-two specimens from 14
populations of the S. brebissoniiS. ovalis complex were
included in the analysis. LM images were taken from
slides GC6450a, GC49470b, GC104843a, GC107127b,
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Valve shape variation in the Pinnatae group of Surirella 11
Table 1. Materials examined. Original identification as recorded in ANSP databases or in Diatom Herbarium catalogues.
Original ANSP slide ANSP material Collection
identification numbers numbers date Locality
Surirella minuta Feb3448 Glasgow, Scotland
S. panduriformis GC4055a May 1952 Savannah River, South Carolina, USA
S. ovalis GC6450a 6 November 1944 Willow Island, Nebraska, USA
S. ovalis GC6727a 22 April 1936 Kayenta Creek, Arizona, USA
S. pinnata,S. minuta GC11277 March 1860 Strehlen, Germany
S. pinnata GC11960 Longpré, France
S. pinnata GC43541 25 December 1926 Run near Merion Station, Pennsylvania, USA
S. ovalis GC49470b Leigh Spring, Virginia, USA
S. ovata,S. ovalis GC100963a GS020021 29 March 1993 Chicod Creek, North Carolina, USA
S. minuta,S. ovata;
type material for
S. lacrimula
GC101350a GS018351 7 June 1994 Accotink Creek, Virginia, USA
S. brebissonii GC104036a 1 September 1999 Aberjona River, Massachusetts, USA
S. brebissonii GC104843a 2 February 1999 Dawson Creek, Louisiana, USA
S. brebissonii GC105049a 17 August 2000 Silver Creek, Utah, USA
S. brebissonii,
S. minuta
GC106518b 3 September 2003 East Foster Creek, Washington, USA
S. brebissonii,
S. brebissonii
var. kuetzingii
GC107127a 25 August 2004 Underwood Creek, Wisconsin, USA
S. brebissonii GC109797b 2 June 2004 Dry Fork Marias, Montana, USA
S. brebissonii,
S. brightwellii
GC109807a MO000434 21 May 2004 Ross Fork Creek, Montana, USA
S. brebissonii GC109819a MO000446 19 June 2004 Wolf Creek, Montana, USA
S. brebissonii GC109825b MO000452 21 June 2004 Coffee Creek, Montana, USA
S. brebissonii GC109827b 29 June 2004 Mason Gulch, Montana, USA
S. minuta GC110629a 10 April 2001 Cane Creek, Tennessee, USA
S. angusta GC111668b CHRS0059 25 March 2008 Churchman’s Marsh, Delaware, USA
S. brebissonii var.
kuetzingii
GC112761a 17 July 2007 Lake Creek, Montana, USA
S. minuta, possible
syntype
HLSEx528 Europe, sent by Brebisson to H.L. Smith
S. pinnata, isotype WmS64 Lewes, England
GC6727a, GC104036a, GC105049a, GC106518b,
GC109797b, GC109825b and GC112761a, all represent-
ing US samples, and scanned images of specimens from the
type population of S. ovalis,S. brebissonii and S. brebis-
sonii var. kutzingii published in Krammer & Lange-Bertalot
(1987) were used. Four hundred and twelve specimens
from 12 populations of the S. minuta species complex were
analyzed. LM images were taken from slides GC4055a,
GC43541, GC101350a, GC109827b, GC110629a and
GC111668b representing US samples; Feb3448 (Scotland),
GC11277 (Germany), WmS64 (isotype slide of S. pin-
nata, England), HLSEx528 (possible syntype of S. minuta,
Europe) and GC11960 (France).
For the landmark-based shape analysis, the same 362
specimens from 14 populations of the S. brebissonii
S. ovalis complex were used, while only 338 speci-
mens from 7 samples of the S. minuta complex were
included. These were LM images from slides GC4055a,
GC111668b, GC101350a, GC109827b and GC110629a
(USA), WmS64 (isotype slide of S. pinnata, England)
and HLSEx528 (possible syntype of S. minuta, Europe).
We conducted landmark-based shape analysis using the
‘tps’ series of software (Rohlf 2007) available from
http://life.bio.sunysb.edu/morph/index.html. The tpsDig2
v. 2.16 program was used to digitize landmarks around the
circumference of the valves. Two of the landmarks were
fixed at the head and foot poles (LM 1, 2 respectively) and
two sets of 18 sliding semi-landmarks (LM 3–20 and 21–
38) were each placed on either side of the circumference
between the poles (Fig. 1). Both authors independently dig-
itized the landmarks for the S. minuta–S. pinnata complex
in order to test whether the method used to place the land-
marks affected the results. We each chose a different method
for the placement of the semi-landmarks: one was to place
landmarks at more frequent intervals on the circumference
where there was greater curvature in order to better approx-
imate the shape, and the other was to place the landmarks at
even distances along the outline of the valve. Shape analyses
on these two datasets were conducted separately.
The left and right half asymmetries were removed using
tpsUtil v. 1.46 to separate the landmarks into two groups:
one group (A) contained the two fixed landmarks (LM 1, 2)
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12 English & Potapova
Fig. 1. Consensus configuration for S. minuta complex repre-
senting the placement of landmarks. Landmarks 1 and 2 are fixed.
Semi-landmarks 3–20 slide between 1 and 2. Semi-landmarks
21–38 slide between 1 and 2.
and the 18 semi-landmarks on the right side of the circum-
ference (LM 3–20); the other group (B) contained the two
fixed landmarks (1, 2) and the 18 semi-landmarks on the left
side (LM 21–38) (Fig. 1). The x-values of the landmarks in
group B were negated so that the two halves of the valves
would have the same direction of curvature when they were
analyzed. In order to make the semi-landmarks homolo-
gous to each other, we used tpsRelw v. 1.49 to slide the
semi-landmarks minimizing the bending energy (Bookstein
1996, Sheets et al. 2004), which allows for the most varia-
tion within a sample. We extracted the ‘aligned specimens’
data, which is based on the Procrustes superimposition and
used that to find the average the x- and y-values of corre-
sponding points (i.e., those symmetrically reflected across
the baseline) on the corresponding halves of the same spec-
imen. In order to maintain the homology of landmarks, we
slid the landmarks a second time using tpsRelw v. 1.49 in
case there were deformations produced by the averaging.
These final averaged and slid landmark values were used in
all shape analyses.
The shape descriptors called partial warps were obtained
from both datasets using tpsRelw v. 1.49 program. Princi-
pal component analysis, also called the relative warp (RW)
analysis of partial warps and uniform components, was
conducted using the same program. The first few relative
warps are considered to capture the major variation in shape
and are treated as composite shape variables. We plotted
RW against valve length to visualize ontogenetic allometric
trends in studied datasets.
Terminology
The sources of the terms used in this article are Ross et al.
(1979), Krammer & Lange-Bertalot (1987) and Ruck &
Kociolek (2004).
Results
Surirella brebissonii and S. ovalis species complex
The plot of valve length and width (Fig. 2) revealed
two groups of specimens corresponding to two groups of
growth trajectories. The group of specimens with a lower
width/length ratio halted abruptly at 38 μm, whereas the
group of relatively wider specimens extended in length
to 70 μm. The larger group contained both of the type
populations of S. brebissonii and S. ovalis, whereas the
smaller group contained the type population of S. brebis-
sonii var. kuetzingii. The two groups of specimens were not
well separated and converged at low valve lengths.
In the relative warp analysis, the first, second and third
relative warps accounted for 79.4, 10.53 and 5.15% of
shape variation, respectively. The rest of the relative warps
altogether accounted for less than 5% of variation. The first
warp (RW1) corresponded to the width and roundness of
the valve relative to its length (Fig. 3) and was moderately
correlated with valve length (R=0.44). The plot of RW1
versus length was similar to the plot of valve width versus
length and revealed two groups of shape trajectories that
overlapped in the smaller valves (Fig. 3). Note that for the
calculation of all population centroids and linear growth
trends, obvious outliers from three samples were not
included. One, two and three outliers were excluded from
GC106518b, GC105049a and GC112761a, respectively.
These specimens were excluded because we could not
be certain that they were from the same species as they
lay far outside the growth trend. As in the plot of valve
width versus length, the specimens from the type popu-
lations of S. brebissonii and S. ovalis fell into the same
group, whereas specimens from the type population of
S. brebissonii var. kuetzingii fell into a separate group. The
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Valve shape variation in the Pinnatae group of Surirella 13
Fig. 2. Scatter plot of length and width for S. ovalisS. brebissonii species complex. Regression lines represent ontogenetic–allometric
trends in individual populations. Specimens from type populations are represented by the hollow shapes.
Fig. 3. Plot of the first relative warp against valve length for S. ovalisS. brebissonii species complex. Regression lines represent
ontogenetic–allometric trends in individual populations. Illustrations outside the plot represent shape approximations of the extreme
values of the warp.
populations from the USA fell into the same respective
groups as in the plot of length and width. The longest valves
of both groups had the same RW1 values, indicating that,
despite their difference in size, they have similar shapes.
The rate of change of this shape component with respect to
length in the S. brebissonii var. kuetzingii group was much
higher than in the S. brebissoniiS. ovalis group.
The second warp reflected the degree of iso- or het-
eropolarity or the position of the widest part of the valve
along the apical axis and was not correlated with valve
length (R=0.01). The population with the most heteropo-
lar valves on average was the type of S. ovalis, but RW2 did
not separate any population groups. No clusters were found
in the plot of the first and second relative warps.
The third relative warp (RW3) reflected the elongation
of the head pole and foot pole (Fig. 4), one of the dis-
tinguishing characteristics of S. ovalis. This relative warp
was correlated most strongly with length (R=−0.68).
No distinct groups of growth trajectories corresponding to
shape change captured by RW3 were found (Fig. 4), but
the type populations of S. brebissonii and S. brebissonii
var. kuetzingii did not vary in this shape character with
respect to length, whereas the type population of S. ovalis
did.
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14 English & Potapova
Fig. 4. Plot of the third relative warp against valve length for S. ovalisS. brebissonii species complex. Regression lines represent
ontogenetic–allometric trends in individual populations. Illustrations outside the plot represent approximations of the extremes of the warp.
Fig. 5. Plot of the first and third relative warps for S. ovalisS. brebisosnii species complex. Centroids of individual populations with
standard error bars.
The plot of RW1 and RW3 showed no clear clusters
of specimens, but the centroids of individual populations
formed two groups along the RW3 axis (Fig. 5). The
composition of these groups was the same as in the width–
length plot and the RW1–length plot except that the type
of S. brebissonii was now placed in the same group as the
type of S. brebissonii var. kuetzingii.
Specimens from populations that comprised the
S. brebissonii var. kueztingii group in the length–width
plot and RW1 are considered here as representatives of
S. brebissonii var. kuetzingii, and those from the larger
group as S. ovalis (because the type specimens of these
species fell into respective groups). The type of S. brebis-
sonii fell into both groups, but had different ontogenetic
allometric trends from those in the S. brebissonii var.
kuetzingii group and had a different overall valve shape
from those in the S. ovalis group, and so is considered dis-
tinct from any US population. The following morphological
descriptions are given to describe ranges of variability of
these taxa observed so far in North America.
Surirella brebissonii var. kuetzingii Krammer &
Lange-Bertalot (Figs 6–10, 17–18)
This description is based on the following popula-
tions from the USA: GC6727a, GC104036a, GC105049a,
GC106518b, GC109797b, GC109825b and GC112761a.
The valves are ovate, 13–56 μm long and 10–24μm wide.
They are heteropolar, with a broadly rounded head pole and,
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Valve shape variation in the Pinnatae group of Surirella 15
Figs 6–16. Surirella brebissonii var. kützingii and S. ovalis, LM. Figs 6–10. Surirella brebissonii var. kützingii. ANSP GC112761a,
Lake Cr., Montana. Fig. 9. Boundary of central area marked with arrow. Figs 11–16. Surirella ovalis.Fig. 11. ANSP GC6450a, Willow
Island, Nebraska. Figs 12–13. ANSP GC49470b, Leigh Spring, Virginia. Figs 14–16. ANSP GC104843a, Dawson Cr., Louisiana. Fig. 14.
Double fibula marked with arrow. Scale bar =10 μm.
in the smaller valves, a rounded foot pole, whereas in the
larger valves the foot pole is cuneate. The raphe fissure is
simple and is discontinuous externally at both the foot and
head poles. The valve face is slightly concentrically undu-
late (Fig. 9). The striae extend from the marginal zone to
the midline. Their density is 18–23 in 10 μm. The striae
are multiseriate, with 2-3 rows of round areolae near the
midline (Fig. 18, white arrow) and 4-5 rows of areolae near
the margin (Fig. 18, black arrow). On the valve face, these
striae pass through marginal depressions (Fig. 18), which
appear as large areolae in LM. Between two striae there is a
costa. There are usually 5–6 fibulae in 10 μm, but we have
observed some to have a density as high as 8 in 10 μm. Occa-
sionally, two fibulae are adjacent (Fig. 17, white arrow) with
only one intervening stria. The interfibular spaces are more
or less rectangular, tapering slightly towards the midline.
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16 English & Potapova
Figs 17–22. Surirella brebissonii var. kützingii and S. ovalis, SEM. Figs 17–18. Surirella brebissonii var. kützingii. Fig. 17. MO000446,
Wolf Cr., Montana. Internal valve view. Double fibula marked with arrow. Fig. 18. MO000452, Coffee Cr., Montana. External valve view.
Rows of striae near midline (white arrow) and near margin (black arrow) Figs 19–22. Surirella ovalis. MO000434, Eoss Fork Cr., Montana.
Figs 19, 21. External valve views. Lower costa marked with arrow (Fig. 21). Fig. 20. Internal valve view. Fig. 22. External view of valve
face close to margin. Striae (white arrow) and costae (black arrow). Scale bars: Figs 17, 21 =4μm, Fig. 18 =2μm, Fig. 19 =6μm,
Fig. 20 =3μm, Fig. 22 =1μm.
The portulae are oval in shape and either one or two striae
wide (Fig. 17).
Surirella ovalis Brebisson 1838 (Figs 11–16, 19–23)
This description is based on the following populations
from the USA: GC6450a, GC49470b, GC104843a and
GC107127b. The valves are ovate, 17–70 μm long and
14–37 μm wide, and vary in shape from very slightly het-
eropolar to heteropolar. In the shortest valves, both apices
are broadly rounded (Fig. 16); in valves of intermediate
length, the head pole is usually broadly rounded while
the foot pole is cuneate (Fig. 15); in the longest valves,
both apices are cuneate (Figs 11, 12), although the head
pole remains broader throughout whole length range. The
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Valve shape variation in the Pinnatae group of Surirella 17
width-to-length ratio ranges from 1.5 to 2. The raphe fis-
sure is simple and is discontinuous externally at both the
foot and head poles. The valve face is strongly concentri-
cally undulate in many of the larger frustules (Figs 11, 19).
The striae are radiate across the valve face from the midline
with a density of 14–19 in 10 μm. The multiseriate striae
have 2–3 rows of areolae near the midline (Fig. 22, black
arrow) and 4–5 rows near the margin (Fig. 22, white arrow).
The striae pass through marginal depressions on the valve
face. The striae contain slit-shaped areolae on the external
valve surface (Fig. 22) and round areolae on the internal
valve surface (Fig. 20). Between the striae there are costae
and every third or fourth costa on the external surface of the
valve, which corresponds to the fibulae on the interior of the
valve, is lower than the surrounding costae (Fig. 21). The
fibulae are broad and marginal, 5–6 in 10 μm. The inter-
fibular spaces are rectangular to triangular and contain one
to three round or oval portulae. Occasionally, two fibulae
are adjacent (Fig. 14) with only one intervening stria.
Surirella minuta and S. pinnata species complex
The plot of valve length and width revealed several groups
of specimens (Fig. 23). Specimens from two populations
formed two smaller groups: one included a few specimens
from slide GC111668b (Delaware, DE), which were consid-
erably longer than the others; while another group consisted
of specimens from slide GC11960 (France), which were
considerably wider than the others. There were also much
smaller valves in the sample from Delaware that were the
same size as the majority of specimens, but there was a
significant gap between the small and the large valves.
The rest of the specimens comprised a large cluster, within
which two partially overlapping groups corresponding to
two shape trajectories could be distinguished. The valves
of trajectory A had a smaller length range than those of
trajectory B. The valves of trajectory A did not exceed
30 μm, whereas those of trajectory B extended up to
48 μm in length, but remained relatively more narrow.
These trajectories separated the largest valves, but con-
verged in the smaller valves. The majority of specimens,
including all of those from the USA, fell into one of
these two groups, but two European populations spanned
both groups: HLSEx528, the possible syntype population
of S. minuta, and the specimens from the lectotype slide
of S. minuta.
In addition to the two type populations of S. minuta
and S. pinnata, we chose five representative samples from
the USA for geometric–morphometric analysis, which will
hereafter in the text and figures be referred to by the fol-
lowing abbreviations: GC4055a from the South Carolina
(SC), GC111668b from Delaware (DE), GC101350a from
Virginia (VA), GC109827a from Montana (MT) and
GC110629a from Tennessee (TN). In the relative warp anal-
ysis, the first, second and third relative warps accounted for
87.9, 6.22, and 2.15% of variation, respectively. The rest of
the relative warps all together captured <4% of the shape
variation. RW1 reflected the variation in the relative width
and the shape of the middle part of the valve (Fig. 24) and
was strongly correlated with length (R=0.83). This rel-
ative warp reflected the general pattern of shape change
through the life cycle, namely that as the cells become
shorter, their width-to-length ratio increases. Most popu-
lations shared this trend and had similar rates of change
in RW1 with respect to length (Fig. 24). The one popu-
lation that did not have a similar rate of change was DE,
which had significantly longer valves. Samples MT, VA,
TN and the syntype of S. minuta had, on average, low
RW1 scores; thus they were, on the whole, relatively wider
than the other populations. The RW1 ontogenetic trajecto-
ries of these four populations formed a tight group. Three
populations with high average RW1 scores and more elon-
gated valve shapes were DE, SC and the isotype population
of S. pinnata.
The second relative warp reflected the degree of iso- or
heteropolarity, or the position of the widest part valve along
apical axis. It showed a very weak correlation with length
(R=0.14), and did not separate any distinct groups of
specimens, allometric trends or centroids. All populations
showed a tendency to become more isopolar in the smaller
valves, whereas the larger valves had varying degrees of het-
eropolarity. All of the populations converged in the RW2
values of their smaller valves and thus had the same degree
of isopolarity.
The third relative warp reflected the variability of the
head and foot poles, especially how narrow the foot pole
was (Fig. 25). This relative warp also had a very weak
correlation with length (R=−0.10). Specimens were not
separated by this warp into distinct clusters (Fig. 25), but
the centroids of the populations showed a significant sepa-
ration between the syntype of S. minuta and MT, VA and TN
(Fig. 26). The specimens of MT, VA and TN had on aver-
age low RW3 scores (a more narrow footpole), whereas
the syntype of S. minuta had high RW3 scores (a more
rounded footpole).
In the plot of RW3 versus RW1, the centroids of popula-
tions formed three clearly defined groups (Fig. 26). Higher
RW1 values separated the isotype of S. pinnata, DE and SC
from the other populations, which meant that their valves
were narrower on average. Higher RW3 and lower RW1
separated the syntype of S. minuta and thus this popula-
tion had wider valves with more rounded footpoles than the
other populations. Three populations, VA, MT and TN, had
low RW3 and RW1 values, and so their valves are generally
wider with narrower footpoles.
We obtained the same results of the RW analysis using
two somewhat different ways of placing landmarks on valve
outlines (Figs 27–28). Although there was some minor vari-
ability in the placement of individual specimens in the shape
space, the major shape trends revealed along the RW axes
remained the same (Fig. 27). The main difference in the
results was that even after the landmarks had been slid, they
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18 English & Potapova
Figs 23. Scatter plot of length and width for S. minuta–S. pinnata species complex. Specimens from type populations are represented
by the hollow shapes. A and B represent two growth trajectories.
Figs 24. Plot of the first relative warp against valve length for the S. minuta–S. pinnata species complex. Regression lines represent
ontogenetic–allometric trends in populations. Illustrations outside the plot represent approximations of the extremes of the warp.
still maintained approximately the density in which they
were placed (Fig. 28), i.e., either equally spaced around the
circumference or more dense in areas of greater curvature.
Despite these differences in placement around the valve cir-
cumference, the RW analysis was able to abstract the same
shape components out of the two datasets.
Three groups of populations within S. minuta species
complex revealed by the landmark analysis were suffi-
ciently different in shape and ontogenetic trends to be con-
sidered different species. One group contained the type of
S. minuta and another the type of S. pinnata. Although these
species have been synonymized, our analysis suggested that
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Valve shape variation in the Pinnatae group of Surirella 19
Figs 25. Plot of the third relative warp (RW3) of shape variation against valve length for the S. minuta complex. Regression lines represent
ontogenetic–allometric trends in populations. Illustrations outside the plot represent approximations of the extremes of the warp.
Figs 26. The plot of the first relative warp (RW1) against the third (RW3) for the S. minuta complex. Centroids of individual populations
with standard error bars.
they need to be maintained. Further examination showed
that these species also differ in the fibula structure. Updated
morphological descriptions of S. minuta and S. pinnata are
given below. The third group of populations (MT, VA and
TN) was different enough in shape from other two to justify
the description of a new species, S. lacrimula.
Surirella minuta Brebisson in Kutzing 1849 (Figs 31–32)
This description is based on the population from the poten-
tial syntype of S. minuta, HLSEx528. The valves are linear
to ovate and 16–36 μm long and 9–11 wide, with a width-
to-length ratio between 1.5 and 4. The head pole is broadly
rounded, while the foot pole is more cuneate. The striae are
fine with a density of 28–30 in 10 μm. The striae are radiate
at the apices and parallel in the middle of the valve. Each
stria begins at the midline and terminates at the keel. The
fibulae, 7–8 in 10 μm, begin at the valve mantle and extend
about half the distance to the apical axial line (Fig. 32).
Surirella pinnata Smith 1853 (Figs 34–38, 41, 43)
This description is based on specimens from two popu-
lations: the isotype of S. pinnata WSM64 and the pop-
ulation from South Carolina, GC4055a. The population
from Delaware, GC11668b, (Figs 33, 42, 44) was not
included in the morphological analysis because, although
the analysis showed strong similarity in shape charac-
ters, the ontogenetic–allometric trends differed significantly
from the other populations of S. pinnata. The population
from slide Delaware was not abundant enough to determine
whether it contained a new species. The small valves in this
population were indistinguishable from S. pinnata, but it
is unknown whether the large valves were from a separate
species.
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20 English & Potapova
Figs 27. The plot of a second set of data generated by a different placement of landmarks in the same specimens. First relative warp
(RW1) against the third (RW3) of shape variation for the S. minuta complex. Centroids of individual populations with standard error bars.
Figs 28. Comparison of the final position of landmarks for the two different ways of positioning landmarks in the S. minuta–S. pinnata
dataset. Pairs (a and b) of the extreme values of the first three relative warps of shape variation. Hollow circles represent placement at
equal distances around the circumference and filled circles represent placement of more landmarks at areas of higher curvature.
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Valve shape variation in the Pinnatae group of Surirella 21
Figs 29–38. Representatives of S. minuta–S. pinnata species complex, LM. Figs 29–30. Surirella lacrimula sp. nov. ANSP GC109827b,
Mason Gulch, Montana. Figs 31–32. Surirella minuta ANSP HLSEx528, Europe. Fig. 32. Short fibula marked with arrow. Fig. 33.
Surirella cf. pinnata. ANSP GC111668b, Churchman’s Marsh, Delaware. Figs 34-38. Surirella pinnata. Figs 34–36. ANSP WmS64,
Lewes, England. Fig. 36. Fibula extending to midline marked with arrow. Figs 37–38. ANSP GC4055b, Savannah R., South Carolina.
Scale bar =10 μm.
The valves of S. pinnata are linear, 14–45 μm long and
7–10 μm wide, with a width-to-length ratio of 2–4.5. The
head pole is broadly rounded, whereas the foot pole is more
cuneate. The raphe fissure is simple and is discontinuous
externally at both the foot and head poles. The density of
the striae in the isotype material was lower than observed
in the S. pinnata in the USA at 24–25 in 10 μm rather
than 26–31 in 10 μm. Corresponding to the fibulae on the
internal valve surface, every fourth costa on the valve face is
lowered below the plane of the other costae (Fig. 41). There
are 3–5 rows of circular areolae in each multiseriate stria
and on the valve face these terminate in a marginal depres-
sion (Fig. 43). The narrow fibulae, 6–8 in 10 μm, begin at
the valve mantle and extend to the midline (Fig. 36). The
interfibular spaces are rectangular and contain one portula.
There are 3–5 striae between the fibulae. The portulae are
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22 English & Potapova
Figs 39–44. Surirella lacrimula sp. nov., S. pinnata and S. cf. pinnata, SEM. Figs 39–40. Surirella lacrimula sp. nov. Type material,
ANSP GS018351, Accotink Cr., Virginia. Fig. 39. External valve view. Fig. 40. Internal view of a head pole. Figs 41, 43. Surirella pinnata.
ANSP GS020021. Chicod Cr., North Carolina. Fig. 41. External valve view. Fig. 43. External view of a head pole. Figs 42, 44. Surirella
cf. pinnata. ANSP CHRS0059, Churchman’s Marsh, Delaware. Fig. 42. Internal valve view. Fig. 44. Internal view of valve margin with
portulae. Scale bars: Figs 39–41 =3μm, Fig. 42 =6μm, Figs 43–44 =1μm.
generally rectangular in shape and are one to two striae
wide.
Surirella lacrimula English sp. nov. (Figs 29-30, 39-40,
45-54, 55-60)
Diagnosis. Valvae ovatae, 19–30 μm longae, 10–13 μm
latae, facie valva leviter circulatim undata, polo ‘capite’
late rotundo et polo ‘pede’ tereti vel anguste cuneato.
Carina humili. Striae tenues densae, ad apices radiantes,
parallelae medio, ad marginem ab linea–mediale exten-
dentes 27–33/10 μm; fibulae tenues margini terminatae
mediatenus de margine ad axem apicalem, 60–80/100 μm.
Description. Valves ovate, 19–30 μm long, 10–13 μm
wide, valve face slightly concentrically undulate with a
broadly rounded head pole and rounded to narrowly cuneate
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Valve shape variation in the Pinnatae group of Surirella 23
Figs 45–54. Surirella lacrimula sp. nov., LM. Figs 45–50. Type material, Accotink Cr., Virginia. Fig. 45. Holotype specimen.
Figs 51–53. ANSP GC110629a, Cane Cr., Tennessee. Fig. 54. ANSP GC109827b, Mason Gulch, Montana. Scale bar =10 μm.
foot pole. Low keel. Fine dense striae, radiate at apices,
parallel in the middle, extending to margin from midline,
27–33/10 μm; fine marginal fibulae terminating part way
from the valve margin to the midline, 60–80/100 μm.
Holotype. Circled specimen on the slide ANSP GC58959
(Fig. 45), Diatom Herbarium, Academy of Natural Sci-
ences, Philadelphia (ANSP).
Isotypes. Circled specimens on slides CANA 85057,
ANSP GC58964.
Type locality. Accotink Creek near Annandale, Virginia,
USA. 38.8128 N, 77.2286 W. Collected by United States
Geological Survey (USGS) staff on 7 June 1994.
Etymology. The name of this species comes from the Latin
lacrima, which means, ‘tear’. It is thus named for its small
size and its distinctive teardrop shape.
Morphological details
Portulae. Similarly to S. minuta, the portulae are
generally rectangualar with rounded corners (Fig. 59).
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24 English & Potapova
Figs 55–60. Surirella lacrimula sp. nov., SEM. Type material, ANSP GS018351, Accotink Cr., Virginia. Fig. 55. Internal valve view.
Fig. 56. External valve view. Fig. 57. External view of the foot pole. Fig. 58. External view of the head pole. Fig. 59. Interior view of a valve
margin with portulae. Fig. 60. External view of a valve margin. Marginal depression marked with arrow. Scale bars: Figs 55–56 =4μm,
Figs 57–60 =1μm.
There is usually one portula between two fibulae, but occa-
sionally there are extra, much smaller portulae between a
large portula and a fibula. The portulae open onto a cavity
or canal formed between the mantle wall and the fibulae.
Fibulae. The fibulae are narrow (200 nm) and proceed
from the mantle 2μm to merge into a single costa
(Fig. 59). On the valve surface, they correspond to costae
that are lower than the surface of the valve.
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Valve shape variation in the Pinnatae group of Surirella 25
Striae. The multiseriate striae run between the costae from
the midline to the valve margin and into a marginal depres-
sion (Fig. 60). In the interior of the valve, the striae can be
seen to extend through the portulae to into the raphe canal.
There are usually 2–3 rows of areolae at the apical axis and
3–4 rows of areolae at the valve margin.
Areolae. The areolae seen from the valve interior are cir-
cular, while on the valve surface they are more oblong.
There is a single row of widely spaced areolae on the apical
axis, which are slightly raised on the valve surface.
Marginal depression on the valve face. There is a
marginal depression at the end of each intercostal striae
on the valve face. The position of the marginal depression
corresponds to the junction of the interior canal wall and
the valve interior surface.
Mantle. The mantle is slightly concave. The mantle has
costae and rows of areolae which line up with those on the
valve face. No other ornamentations were present.
Raphe. The raphe slits are externally discontinuous at
both the head and the foot poles. The external raphe ends
are simple. The raphe can be seen in the canal cavity behind
the portulae.
Distribution. Surirella lacrimula is apparently a widely
distributed species across North America. It was found
in most of the ANSP slides with records of S. minuta or
S. pinnata and many of the records of S. brebissonii,
S. brebissonii var kuetzingii and S. ovata that we checked.
Discussion
Our analysis revealed multiple ontogenetic allometric
trends and shape groups within species complexes in the
Pinnatae group of the genus Surirella. Although there was
a statistically significant difference in shape among groups,
their ranges of variation overlapped, including striae and
fibulae density (Table 2), particularly in the smaller valves.
This means that at present it is impossible to draw precise
species boundaries within this group based on morphome-
tric characters and some specimens cannot be identified
with certainty to species level. However, we found that
quantitative characterization of valve shape and allomet-
ric trends were useful for exploring species diversity within
this taxonomic group. The landmark-based shape analysis
was shown to be unaffected by the person placing the land-
marks because we obtained almost identical results between
two independently collected datasets.
Landmark-based shape analysis revealed two shape
groups in S. brebissoniiS. ovalis species complex:
one group contained the type population of Surirella
ovalis, whereas the other included type populations of
S. brebissonii and S. brebissonii var. kuetzingii. The two
latter varieties had the same valve shape, but differed in
their dominant ontogenetic trends. The growth trajectory
of S. brebissonii was actually similar to that of S. ovalis.
Although it was already known that S. brebissonii var.
kuetzingii had a much smaller size range than S. brebissonii
(Krammer & Lange-Bertalot 1987), our analysis showed
that this variety passes through the same range of shape
transformation as S. brebissonii, but does so within a
much smaller size range. The valves of S. brebissonii var.
kuetzingii also change more in shape over a given decrease
in length than those of S. brebissonii. The specimens from
the USA, which were identified as a nominate variety of
S. brebissonii or S. brebissonii var. kuetzingii, all conformed
to the growth trajectory of S. brebissonii var. kuetzingii.
There is insufficient data at present to determine whether
the nominate variety of S. brebissonii and var. kuetzingii
represent separate biological species, but it is notable that
we found no populations with intermediate growth trends
between these two varieties. Surirella brebissonii var. kuet-
zingii seems to be more common than the nominate variety
not only in North America, but also in Europe, because
relatively short valves for the most part are illustrated in
European floras (e.g., Germain 1981: pl. 152, fig. 108 as
S. ovata Kützing; Snoeijs 1993).
Most studied populations in the S. minuta–S. pinnata
species complex had similar ontogentic allometric trends.
The shape analysis revealed, however, three different shape
groups. These groups overlapped, but were sufficiently
Table 2. Morphological characteristics of selected low-keel Surirella species.
Taxa, materials Length (μm) Width (μm) Striae/10 μm Fibulae/10 μm
Surirella brebissonii var. kuetzingii, from all USA populations 13–38 10–18 18–24 5–8
S. iowensis, from all USA populations 21–54 15–33 16–26 6–8
S. lacrimula sp. nov. from all USA populations 19–30 10–13 27–33 6–8
S. lacrimula sp. nov., type population, GS018351 19–28 10–12 27–32 6–8
S. minuta, HLSEx528 syntype? 16–36 9–11 28–30 7–8
S. minuta cf., CHRS0059 18–70 7–14 20–31 5–8
S. ovalis, from all USA populations 17–70 14–37 14–19 5–6
S. pinnata, GC4055a 17–35 7–10 26–31 7–8
S. pinnata, WmS64 isotype 14–45 8–10 24–25 6–7
S. suecica, from all USA populations 14–34 7–10 30–36 9–12
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26 English & Potapova
statistically different to justify their identification as species.
One, S. pinnata, was separated from the other populations
by the first relative warp, or the relative width and round-
ness of the valve. The second, S. minuta, was separated
from the remaining populations by the third relative warp,
or the shape of its poles. The remaining populations had
very similar ontogenetic trends and shape averages, and so
they were described as a new species, S. lacrimula.
Surirella lacrimula differs from S. minuta by its
smaller range of length and by the more acute foot pole.
Surirella pinnata can be distinguished from S. lacrimula by
not only its narrowly linear valves shape, but also fibulae
extending fully to the midline, whereas those of S. lacrimula
stop far from it. Surirella lacrimula differs from S. ovalis,
S. iowensis, S. stiria and S. brebissonii primarily by its
higher density of costae, 27–32 in 10 μm instead of 14–
24 in 10 μm. It is also never longer than 30 μm, whereas
S. ovalis,S. iowensis and S. brebissonii can be >55 μm.
Surirella iowensis can also have a valve face that is twisted
about the apical axis, but S. lacrimula has only a flat valve
face. Surirella lacrimula differs from S. suecica,S. stalgma
and S. atomus in the structure of its fibulae and the shape of
the valve. The fibulae of these three species are very short
and wide and do not extend from the margin of the valve,
whereas S. lacrimula has narrower fibulae that extend part
way across the face of the valve. The foot poles of these
species are narrower than S. lacrimula and the foot pole of
S. stalgma is always capitate.
Based on this examination of the type populations, there
is evidence to suggest that S. minuta and S. pinnata should
not be synonymized. Both the morphometric analysis of
valve shape and differences in the structure of the fibulae
indicate that these are two similar but separate taxa. The
valves of S. pinnata are narrowly linear, whereas those of
S. minuta are relatively wider. The fibulae in S. minuta do
not extend to the midline like those in S. pinnata.
It is difficult to determine whether the studied popula-
tion of S. minuta from the Brébisson collection (slide ANSP
HLSEx528) was necessarily a syntype of this species. The
original description of S. minuta (Kützing 1849) did not pro-
vide many morphological details of the species. The length
range supplied in the description, 21–45 μm, is longer than
the range in the possible syntype HLSEx528, 16–36 μm,
and the fibulae in the syntype are twice as dense (7–8
in 10 μm) as in the original description (3–4 in 10 μm).
Krammer & Lange-Bertalot (1987) examined the original
material of S. minuta, and their illustrations show specimens
with the same dimensions, shape and density of structural
elements as in the possible syntype population that we
studied.
In studied materials from the USA, S. pinnata was fairly
rare although S. lacrimula was common. Surirella lacrim-
ula also appears to be present in Europe (Ector & Hlúbiková
2010: pl. 115, figs 69–76, pl. 116, figs 1–6). No USA
specimens fit the third shape group, S. minuta.
It has already been shown by Stoermer & Ladewski
(1982) that quantitative shape analysis can reveal shape dif-
ferences in diatoms that are not always seen with human
eye. Our study confirms this and demonstrates that shape
analysis including a study of ontogenetic allometry may be
a valuable exploratory tool in discovering diatom species
diversity.
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... kuetzingi. From the literature, this species has a global distribution (Krammer & Lange-Bertalot 1987, English & Potapova 2012, Bey & Ector 2013, Dedić et al. 2015, Caglar et al. 2022. Fig. 59). ...
... 71 in that paper) showing the characteristics of the portulae for S. minuta. In their study, English & Potapova (2012) also provided valve dimensions, stria and fibula densities for S. minuta, but did not mention the characteristics of its portulae (Table 1). For the population from Qinghai Province, we provided a valve size reduction series, valve dimensions, stria and fibula densities, and clearly demonstrated that the characteristics of its portula are the same as what Krammer & Lange-Bertalot illustrated. ...
Article
During our investigations on the freshwater diatoms from Qinghai Province, China, four sympatric Surirella taxa belonging to the group Pinnatae were analysed. Based on morphological observations derived from light and scanning electron microscopy, three of these four taxa were identified as: S. minuta, S. lacrimula, and S. brebissonii var. kuetzingii. The fourth taxon is described as Surirella liubingii sp. nov., a new species with a unique combination of characteristics. These include the distribution pattern of its costa-stria bundles (CSBs) alternating with its over-fibula costae (OFCs), which is formed by the distinctly elevated CSBs on the valve face, mostly composed of three costae, and OFCs with a remarkedly lower position. Other characteristics include the presence of robust fibulae extending to the valve midline, the presence of only one portula between two adjacent fibulae, and a "pseudoseptum" extending internally from the valve margin. From the observations on these four Surirella taxa, we described and discussed two types of fibula (one in which the fibula nearly reaches the valve midline and one with short fibula) and two types of portula morphology (one with only one portula between two adjacent fibulae and the other with 2-4 portulae between two adjacent fibulae).
... Among the many methods used for shape analysis (Pappas et al. 2014), sliding landmarks shape analysis was developed to detect variation and differences among organisms and structural shapes (Rohlf & Slice, 1990), and has been applied to analysis of siliceous algae using both light and scanning electron micrographs (e.g. Beszteri et al. 2005, English & Potapova 2012, Siver et al. 2013. Key findings have supported the separation of closely related taxa, provided morphological support for molecular phylogenies, enabled new species recognition, and defined species-level ontogenies from multiple temporal samples (English & Potapova 2012, Burge et al. unpubl.). ...
... Key findings have supported the separation of closely related taxa, provided morphological support for molecular phylogenies, enabled new species recognition, and defined species-level ontogenies from multiple temporal samples (English & Potapova 2012, Burge et al. unpubl.). Whereas S. catillifera is easily distinguished among Semiorbis taxa by traditional morphometrics, it was only by combining traditional morphometrics with sliding landmarks shape analysis, similar to English & Potapova (2012), that we could discern the ontogenetic patterns that readily differentiate the three strongly arched Semiorbis species. ...
Article
Full-text available
The genus Semiorbis was erected by R.M.Patrick in 1966 as monotypic based on the relatively rare taxon Semiorbis hemicyclus. Defining characters for Semiorbis include strongly arcuate valves, short eunotioid raphe branches, well-developed external costae with spine-like projections on the virgae, lack of rimoportulae, and a broader dorsal mantle. New populations of Semiorbis were found in the central USA (Wisconsin) on Outer Island, Apostle Islands National Lakeshore, along southeast Lake Superior, from a lake in New Jersey (USA), and from a small arctic lake in Nunavut, Canada. The population in Outer Lagoon, a shallow embayment cut off from Lake Superior by a long-shore bar, provided documentation of living cells and colonies of Semiorbis. We examined the morphology, ecology, and taxonomy of these new populations using light and scanning electron microscopy, traditional morphometrics, and sliding landmarks shape analysis. We compared these populations to European populations of Semiorbis hemicyclus and North American populations of Semiorbis rotundus and Semiorbis catillifera. We determined that the population found in Wisconsin represents a new species herein described as Semiorbis eliasiae Edlund, D.R.L.Burge, N.A.Andresen & VanderMeulen sp. nov., the New Jersey (USA) population is Semiorbis rotundus, and the Nunavut (Canada) population represents a North American population of the generitype Semiorbis hemicyclus.
... Despite significant changes in valve outline during diatom morphogenesis, an overall specific valve shape for each species is retained throughout the size-diminution series [30]. Therefore, ontogenetic-allometric trajectories visualizing the variation of valve shape with size can be used for the morphological characterization of diatom species [20,31,32]. The main idea of applying allometric regression lines for species recognition is that the shape of different specimens is easier to compare when the specimens all have the same size [32]. ...
Article
Full-text available
In Lake Ladoga (northwestern Russia), we found a diatom, putatively Fragilaria sublanceolata-baikali, an endemic species from Lake Baikal (southeastern Siberia, Russia). To determine whether this population matches a previously recognized species from Lake Baikal and assess how it differs from other similar Fragilaria taxa, we studied the valve morphology of three morphologically similar Fragilaria populations (the putative F. sublanceolata-baikali, F. pectinalis and F. perminuta) sampled in Lake Ladoga, along with a population of F. sublanceolata-baikali sampled in Lake Baikal. We used light and scanning electron microscopy with a combination of traditional and geometric morphometric methods. To analyze covariation between the valve shape and size (i.e., allometry), we examined differences in the ontogenetic–allometric trajectories at both the interspecific and intraspecific levels. In addition, the effect of size correction of the valve shape on species differentiation was tested. Traditional morphometrics revealed that F. sublanceolata-baikali is distinguished from F. pectinalis and F. perminuta by valve length, while F. pectinalis and F. perminuta are distinguished by striae density. All three species of Fragilaria showed separate and parallel allometric trajectories. In contrast, the two populations of F. sublanceolata-baikali were on a common allometric trajectory, indicating the conspecificity between these populations. Prior to allometric correction, geometric morphometrics was not able fully discriminate between the three Fragilaria species. After allometric correction, the three Fragilaria species were clearly separated in a size-corrected morphospace, whereas the two populations of F. sublanceolata-baikali formed a tightly overlapping group. Thus, we conclude that geometric morphometrics can reliably distinguish between these morphologically similar species of Fragilaria, but only after accounting for allometric shape variation. Our study confirmed morphological similarity between the two geographically distant populations of F. sublanceolata-baikali, which indicates that this taxon can be considered as invasive in Lake Ladoga.
... The terminology for parts of the valve and girdle follow English & Potapova (2012) and Taylor & Cocquyt (2016). The photographs were adjusted to a uniform magnification (×1000) and resolution (300 dpi) using Photoshop CC (Adobe, California, USA). ...
Article
Full-text available
A new species Surirella caljoniana sp. nov. is described from a unique microenvironment in the mountainous region of Türkiye. The taxon was found in a small soda spring which is an important water source for the Kızılırmak River. Surirella caljoniana is similar to Surirella brebissonii Krammer & Lange-Bertalot, S. brebissonii var. kuetzingii Krammer and Lange-Bertalot, S. lacrimula J.D.English, S. neglecta Reichardt and S. subsalsa W.Smith in morphology and shape. Unlike the other taxa, S. caljoniana has an oval-elliptic, slightly heteropolar outline, larger length/width ratio and a narrowly rounded, slightly protracted foot pole. Over the striae, distinct fimbriate silica protrusions are evident and similar to some marine species within the Pinnatae.
... It was successfully classified at the species level when using the full 331-bp marker (an identical match to S. brebissonii) whereas the 263-bp shared region of this ASV was also identical to several other Surirella species from the Pinnatae group. Species of the Pinnatae group are characterized by close phylogenetic relationships reflected in small interspecific genetic differences, not only in rbcL but also in other molecular markers (Ruck et al., 2016), and morphological separation of S. brebissonii from other species of this group is difficult (morphometric characteristics overlap between species: English and Potapova, 2012;Krammer and Lange-Bertalot, 1987). In this case, differentiating species could even be relevant for biomonitoring, because S. brebissonii can dominate diatom assemblages (for instance, in some German rivers: Lange-Bertalot et al., 2017) and differs in IPSS and IPSV values from some other species of the Pinnatae group, (S. brebissonii and S. lacrimula have IPSS = 3 and IPSV = 2, whereas all S. angusta and S. ovalis var. ...
Article
Two short diatom rbcL barcodes, 331-bp and 263-bp in length, have frequently been used in diatom metabarcoding studies. They overlap in a common 263-bp region but differ in the presence or absence of a 68-bp tail at the 5′ end. Though the effectiveness of both has been demonstrated in separate biomonitoring and diversity studies, the impact of the 68-bp non-shared region has not been evaluated. Here we compare the two barcodes in terms of the values of a biotic index (IPS) and the ecological status classes derived from their application to an extensive metabarcoding dataset from United Kingdom rivers; this comprised 1703 samples and was produced using the 331-bp primers. In addition, we assess the effectiveness of each barcode for discrimination of genetic variants around and below the species level. The strong correlation found in IPS values between barcodes (Pearson's R = 0.98) indicates that the choice of the barcode does not have major implications for current WFD ecological assessments, although a very few sites (55: 3.23% of those analysed) were downgraded from an acceptable WFD class (“good”) to an unacceptable one (“moderate”). Analyses of the taxonomic resolution of the two barcodes indicate that for many ASVs, the use of either marker – 263-bp and 331-bp – gives unambiguous assignations at species level though with differences in bootstrap confidence values. Such differences are caused by the stochasticity involved in the naïve Bayesian classifier used and by the fact that genetic distance, regarding closely related species, is increased when using the 331-bp barcode. However, in three cases, species differentiation fails with the shorter marker, leading to underestimates of species diversity. Finally, two ASVs from Nitzschia species evidenced that the use of the shorter marker can sometimes lead to false positives when the extent and nature of infraspecific variation are poorly known.
... In this regard, the technique of geometric morphometric shape analysis, which allows visualizing ontogenetic allometric trajectories in the multivariate morphospace, has proved to be a useful and effective extension of the traditional morphometric approach (e.g. Stoermer & Ladewski, 1982;Mou & Stoermer, 1992;English & Potapova, 2012;Edgar et al., 2015;Kulichová & Fialová, 2016). ...
Article
Full-text available
The morphology and ontogenetic allometric trends of a rare diatom Fragilaria heidenii Østrup and the morphologically related Staurosira tabellaria (W. Smith) Leuduger-Fortmorel were compared using conventional and semilandmark-based geometric morphometric analyses. Fragilaria heidenii was studied in detail by light and electron microscopy using type material and recent samples from Lake Ladoga and Lake Ilmen (north-western Russia). The taxon is transferred into the genus Staurosira Ehrenberg as Staurosira inflata comb. nov. on the basis of its valve morphology. This taxon is characterized by the absence of rimoportulae, lack of perforated copulae, spines located on the interstriae, internal vola occlusion in the areolae and the features of the areolae and apical pore fields. Conventional morphometric analysis showed considerable overlapping of S. inflata and S. tabellaria in their frustule characteristics such as length, width, length-to-width ratio and striae density. Moreover, at later stages of the vegetative life cycle, S. inflata has a tendency to resemble S. tabellaria by its valve outline that makes it difficult to separate these two taxa. The geometric morphometric analysis revealed two shape groups corresponding to S. inflata and S. tabellaria that were separated by a clear gap. Semilandmarks representing shape of the middle part of the valve were primarily responsible for discrimination between species. Apart from differences in valve shapes, S. inflata and S. tabellaria also differed significantly in their ontogenetic allometric trajectories. Overall, our results demonstrate that the semilandmark-based geometric morphometrics is sensitive enough to distinguish species by their outlines, when traditional morphometric parameters are not able to discriminate them with confidence.
... 209: 1-2), but the type specimens of Hustedt's taxon does not have a spine at the central area, as illustrated in Simonsen (1987, pl. 757: 4-5 Kociolek 2004), and the various morphologies of the structure of helictoglossae in Iconella or Surirella are poorly documented for new species, even in more recent treatments (e.g.: English & Potapova 2011;Blanco et al. 2012;Van de Vijver et al. 2013;Brindle et al. 2018). Ruck & Kociolek (2004) described helictoglossae in S. robusta Ehrenberg (Ehrenberg 1840) and S. splendida to have typical helictoglossae-like process at the footpole (Ruck & Kociolek 2004, pl. ...
... Maximum size is usually generated from a zygote (auxospore) de novo [1,12]. Although shape changes during ontogeny may obscure interspecific differences, species-specific allometric trajectories may be recognized and quantified using morphometric methods [13][14][15]. Cell division can produce deviations in symmetric structures such as valve outlines that may reflect genetic, environmental, or random variability in developmental processes [16][17][18]. In diatoms, pronounced intraspecific phenotypic plasticity may arise by the transmission and subsequent amplification of tiny deviations in the course of the vegetative part of the life cycle [19]. ...
Article
Full-text available
Irregularities in cell division can produce asymmetry in symmetric structures, such as outlines of diatom cells, which can reflect genetic, environmental, or random variability in developmental processes. This study examined 12 phylogenetic lineages of the diatom genus Frustulia using landmark-based geometric morphometrics to assess the variation between cell segments separated by apical and transapical axes. Although asymmetric variation within cells differed in some lineages, these irregularities most likely did not reflect the evolutionary history of the lineages. The intraclonal phenotypic plasticity of diatom frustules was induced rather by nongenetic factors, i.e., inherited valve abnormalities, constraints of siliceous cell walls, and random developmental instability during morphogenesis. The positive correlations between the symmetric and asymmetric components of shape variation indicated that the morphogenesis of diatom cell walls affected irregularities within cells and variability among the symmetrized cells to a similar extent.
Article
Full-text available
Diatom cultures can help answer taxonomic, biogeographic and ecological questions on a local and global scale. Unialgal cultures are derived from a single cell and provide abundant material for morphological and molecular analyses. The link between the historic morphological species concept and the molecular data is becoming increasingly important with the use of eDNA metabarcoding. Additionally, cultures provide insights into the life cycle of diatoms and thereby complement taxonomy and species ecology. In this study, we present an approach to extract benthic diatoms from an environmental sample to generate unialgal cultures. We explored diatom diversity in preserved assemblages and by culturing as many different taxa as possible from benthic freshwater samples taken on the same day from the Bow River in Calgary, Canada. With both methods we found a total of 221 different benthic diatom taxa, of which 182 were identified in the preserved diatom assemblages. Interestingly, an additional 39 taxa only appeared in the cultures. In total 129 strains were cultivated representing 71 different taxa. This study includes pictures of living cells demonstrating the additional merits of unialgal cultures, as they provide information on plastid details, auxospores and endosymbionts. Both, the identification of the diatom assemblages and the generation and identification of strains provide the foundation for additional water quality assessment tools, taxonomic insights and molecular references libraries.
Article
Full-text available
A number of pennate diatom genera typically have teratogenic deformations of their siliceous frustules due to the effects of environmental stress, such as high concentrations of heavy metals and low pH. However, the quantitative assessment of these deformations has rarely been applied. One species in which aberrations have frequently been reported is Eunotia bilunaris, which typically has bilaterally symmetric frustules with dorso-ventral differentiation. In this study, we aimed to illustrate the geometric morphometric analysis of symmetry as a tool for assessing the severity of teratogenic deformations. These were quantified by Procrustes superimposition of equidistant points placed along the valvar outlines in pairs of configurations based on their bilateral reflection symmetry. The shape deformations were mostly confined to central parts of the ventral outlines and were captured both by the symmetric and asymmetric subspaces of the variation. The amount of bilateral asymmetry in individual cells was negatively related to frustule size via the allometric power law relationship, illustrating that asymmetry increased in the asexual diminution series. The presented analysis provides a framework for the quantitative assessment of frustule deformations in eunotioid diatoms that can be used for the comparative scoring of teratogenic deviations among cells, populations, or species.
Article
Full-text available
Navicula reinhardtii and its allies are characterized among the naviculoid diatoms by ail apomorphic, or derived, character: heteromorphic terminal raphe endings that deflect in opposite directions. In the ancient lakes of Hovsgol (Mongolia), Baikal (Russia), and Prespa (Macedonia), species complexes or flocks made up of two to seven Navicula reinhardtii morphodemes are found; however, apart from the nominate morphodeme, the lakes do not share any of their morphodemes with other lakes. In Lake Hovsgol, four morphodemes can be distinguished from Navicula reinhardtii of the type using traditional morphometric analyses. We are formally describing the members of the Hovsgol reinhardtii-complex to include (in addition to Navicula reinhardtii), Navicula hoevsgoelreinhardtii sp. nov., Navicula mongolreinhardtii nom. nov stat. nov., Navicula apiculatoreinhardtii sp. nov., and Navicula apiculatoreinhardtii f. biseriata f. nov. Characters that differentiate these taxa include valve size and shape, striae density, and striae patterns.
Chapter
The greatest strength of the new geometric morphometrics is the system of interrelated multivariate and graphical procedures it offers for a variety of analytic questions involving landmark data. A typical analysis will begin with the conversion of landmark data into a multivariate statistical representation of shape, will continue with a series of broadly familiar multivariate matrix manipulations, and will conclude by inspection of a considerable variety of diagrams that represent the findings in both the space of shape coordinates per se and the space of the two-or three-dimensional image of the organism. The choices under the first heading, the passage to a multivariate representation of shape, include two-point shape coordinates, partial warp scores, and Procrustes residuals. Each of these except the partial warp scores is unsuitable for some subset of the reasonable matrix manipulations; for instance, shape coordinates do not supply sensible principal components analyses, and Procrustes residuals cannot lead to sound canonical variate analyses without modification. The modes of diagramming data include thin-plate splines, partial warp splines and scatters, Procrustes residual scatters, and resistant-fit scatters, among others. Most analyses benefit greatly from exploiting more than one of these.
Book
Volume 4 in a series which has resulted from a joint intercalibration programme of the Baltic Marine Biologists (BMB) Working Group 27. Each species is illustrated with a photograph and extensive references to the appropriate up-to-date information literature. This book can be ordered from http://www.nhbs.com and other internet book stores. In volumes 1-5 the following 500 species are treated, all, illustrated, each on a separate page: Achnanthes amoena Achnanthes bahusiensis Achnanthes bremeyeri Achnanthes brevipes Achnanthes brevipes var. intermedia Achnanthes cf. minuscula Achnanthes dispar Achnanthes fimbriata Achnanthes fogedii Achnanthes groenlandica Achnanthes lemmermannii Achnanthes linkei Achnanthes longipes Achnanthes oblongella Achnanthes pericava Achnanthes submarina Achnanthes vistulana Achnanthidium microcephalum Achnanthidium minutissimum Achnanthidium thermale Actinocyclus normanii Actinocyclus normanii fo. subsalsus Actinocyclus octonarius var. crassus Actinocyclus octonarius var. tenellus Actinoptychus senarius Amphora abludens Amphora acutiuscula Amphora beaufortiana Amphora cf. bacillaris Amphora cf. exigua Amphora cf. tenerrima Amphora coffeaeformis Amphora commutata Amphora copulata Amphora decussata Amphora fogediana Amphora helenensis Amphora holsatica Amphora hyalina Amphora hybrida Amphora laevissima Amphora lineolata Amphora luciae Amphora macilenta var. typica Amphora maletractata var. constricta Amphora micrometra Amphora ostrearia var. lineata Amphora ovalis Amphora pediculus Amphora rhombica var. intermedia Amphora robusta Amphora staurophora Amphora subholsatica Amphora veneta Amphora wisei Anaulus balticus Aneumastus minor Aneumastus tusculus Anomoeoneis sphaerophora fo. costata Anomoeoneis sphaerophora fo. sculpta Anorthoneis vortex Ardissonea crystallina Ardissonea fulgens Asterionella formosa Attheya decora Attheya septentrionalis Aulacoseira islandica Aulacoseira subarctica Bacillaria paxillifer Berkeleya fennica Berkeleya micans Berkeleya rutilans Biremis ambigua Biremis lucens Brachysira aponina Kützing Brachysira vitrea Brebissonia lanceolata Caloneis aemula Caloneis amphisbaena Caloneis amphisbaena fo. subsalina Caloneis bacillum Caloneis crassa Campylodiscus bicostatus Campylodiscus clypeus Campylodiscus echeneis Catenula adhaerens Cavinula cocconeiformis Cavinula pseudoscutiformis Cerataulina pelagica Cerataulus turgidus Chaetoceros affinis Chaetoceros brevis Chaetoceros cf. borealis Chaetoceros cf. fallax Chaetoceros danicus Chaetoceros decipiens Chaetoceros diadema Chaetoceros holsaticus Chaetoceros mitra Chaetoceros muelleri var. subsalsum Chaetoceros similis Chaetoceros simplex Chaetoceros subtilis Chaetoceros throndsenii Chaetoceros wighamii Cocconeis costata Cocconeis disculus Cocconeis molesta var. crucifera Cocconeis neothumensis Cocconeis pediculus Cocconeis peltoides Cocconeis placentula Cocconeis placentula var. euglypta Cocconeis pseudomarginata Cocconeis quarnerensis Cocconeis scutellum Cocconeis speciosa Cocconeis stauroneiformis Coscinodiscus asteromphalus Coscinodiscus granii Coscinodiscus radiatus Coscinodiscus wailesii Cosmioneis pusilla Craticula cuspidata Ctenophora pulchella Cyclostephanos dubius Cyclotella atomus Cyclotella choctawhatcheeana Cyclotella meneghiniana Cyclotella radiosa Cyclotella schumannii Cyclotella stelligera Cylindrotheca closterium Cymatopleura elliptica Cymatopleura solea Cymbella affinis Cymbella cistula Cymbella helvetica Cymbella lanceolata Cymbella pusilla Denticula creticola Denticula sundayensis Denticula tenuis var. crassula Diatoma bottnica Diatoma moniliformis Diatoma tenuis Diatoma vulgaris Dickieia subinflata Didymosphenia geminata Dimeregramma minor Diploneis decipiens var. parallela Diploneis didyma Diploneis domblittensis Diploneis interrupta Diploneis litoralis Diploneis mauleri Diploneis oculata Diploneis smithii Diploneis smithii var. dilatata Diploneis smithii var. pumila Diploneis smithii var. rhombica Diploneis stroemii Diploneis suborbicularis Ditylum brightwellii Donkinia angusta Donkinia recta var. minuta Ellerbeckia arenaria Encyonema caespitosum Encyonema lacustre Encyonema prostratum Encyonema silesiacum Encyonopsis behrei Encyonopsis microcephala Entomoneis paludosa Entomoneis pseudoduplex Entomoneis punctulata Epithemia adnata Epithemia sorex Epithemia turgida Epithemia turgida var. westermannii Eucampia zodiacus Fallacia clepsidroides Fallacia cryptolyra Fallacia florinae Fallacia forcipata Fallacia litoricola Fallacia plathii Fallacia pseudolitoricola Fallacia pseudony Fallacia pygmaea Fallacia tenera Fragilaria amicorum Fragilaria capucina Fragilaria crotonensis Fragilaria gedanensis Fragilaria heidenii Fragilaria hyalina var. durietzii Fragilaria inflata var. istvanffyi Fragilaria parasitica Fragilaria striatula Fragilaria vaucheriae Fragilariopsis cylindrus Frustulia creuzburgensis Gomphocymbella ancyli Gomphonema acuminatum var. coronatum Gomphonema olivaceum Gomphonema parvulum Gomphonemopsis exigua Gomphonemopsis exigua var. platypus Gomphonemopsis pseudexigua Grammatophora marina Grammatophora oceanica Guinardia flaccida Gyrosigma acuminatum Gyrosigma attenuatum Gyrosigma balticum Gyrosigma eximium Gyrosigma fasciola Gyrosigma macrum Gyrosigma strigilis Hantzschia virgata Hantzschia virgata var. gracilis Hantzschia virgata var. wittii Haslea crucigera Haslea crucigeroides Haslea ostrearia Hustedtiella baltica Hyalodiscus scoticus Hyalosira delicatula Karayevia clevei Leptocylindrus danicus Leptocylindrus minimus Licmophora abbreviata Licmophora communis Licmophora dalmatica Licmophora debilis Licmophora gracilis var. anglica Licmophora hyalina Licmophora oedipus Licmophora rhombica Lunella bisecta Luticola mutica Lyrella sulcifera Martyana atomus Martyana martyi Martyana schulzii Mastogloia baltica Mastogloia braunii Mastogloia elliptica Mastogloia exigua Mastogloia lanceolata Mastogloia pumila Mastogloia pusilla Mastogloia smithii Mastogloia smithii var. amphicephala Melosira arctica Melosira lineata Melosira moniliformis Melosira nummuloides Melosira varians Melosira westii fo. parva Meridion circulare Navicula aboensis Navicula arenaria Navicula armoricana Navicula bipustulata Navicula bottnica Navicula capitata var. hungarica Navicula clamans Navicula crucicula Navicula cruciculoides Navicula cryptocephala Navicula decussis Navicula digitoradiata Navicula directa Navicula duerrenbergiana Navicula eidrigiana Navicula finmarchica Navicula flanatica Navicula germainii Navicula germanopolonica Navicula gregaria Navicula infirmitata Navicula integra Navicula jentzschii Navicula lanceolata Navicula laterostrata Navicula lesmonensis Navicula margaritiana Navicula meniscus Navicula microdigitoradiata Navicula oblonga Navicula oestrupii Navicula palpebralis Navicula pavillardii Navicula pelagica Navicula peregrina Navicula perminuta Navicula phyllepta Navicula platystoma Navicula portanova Navicula protracta Navicula pseudocrassirostris Navicula radiosa Navicula ramosissima Navicula ramosissima var. torquata Navicula reinhardtii Navicula rhynchocephala Navicula salinarum Navicula scutelloides Navicula slesvicensis Navicula starmachioides Navicula supralitoralis Navicula tripunctata Navicula vanhoeffenii Navicula viminoides Neidium iridis var. amphigomphus Neosynedra provincialis Nitzschia acicularis Nitzschia ardua Nitzschia aurariae Nitzschia bacillum Nitzschia brevissima Nitzschia cf. angustatula Nitzschia cf. distans Nitzschia clausii Nitzschia dippelii Nitzschia dissipata Nitzschia dubia Nitzschia dubiiformis Nitzschia elegantula Nitzschia filiformis Nitzschia frigida Nitzschia frustulum Nitzschia grossestriata Nitzschia heufleriana Nitzschia inconspicua Nitzschia littorea Nitzschia lorenziana Nitzschia microcephala Nitzschia paleacea Nitzschia pusilla Nitzschia recta Nitzschia recta var. robusta Nitzschia reversa Nitzschia salinicola Nitzschia scalaris Nitzschia scalpelliformis Nitzschia sigma Nitzschia sigmoidea Nitzschia thermaloides Nitzschia valdestriata Nitzschia vitrea Odontella aurita Odontella mobiliensis Odontella sinensis Opephora marina Opephora olsenii Paralia sulcata Parlibellus berkeleyi Parlibellus delognei Parlibellus hamulifer Parlibellus plicatus Pauliella taeniata Petrodictyon gemma Petroneis granulata Petroneis humerosa Petroneis latissima Petroneis marina Petroneis monilifera Pinnularia acuminata Pinnularia appendiculata Pinnularia cruciformis Pinnularia elegans Pinnularia halophila Pinnularia lundii Pinnularia mesolepta Pinnularia neomajor Pinnularia quadratarea Placoneis clementis Placoneis gastrum Placoneis placentula Plagiogramma staurophorum Plagiotropis lepidoptera Plagiotropis tayrecta Plagiotropis vanheurckii Plagiotropis vitrea Planothidium calcar Planothidium delicatulum Planothidium dubium Planothidium frequentissimum Planothidium oestrupii Planothidium rostratum Planothidium septentrionalis Pleurosigma aestuarii Pleurosigma angulatum Pleurosigma elongatum Pleurosigma formosum Pleurosigma lanceolatum var. cuspidatum Pleurosigma salinarum Pleurosigma subsalsum Pleurosira laevis fo. polymorpha Porosira glacialis Proboscia alata Proschkinia poretzkajae Psammodictyon panduriforme var. continua Psammothidium bioretii Psammothidium punctulatum Psammothidium rossii Pseudogomphonema kamtschaticum Pseudonitzschia pseudodelicatissima Pseudonitzschia pungens Pseudosolenia calcar-avis Pseudostaurosira brevistriata Pseudostaurosira brevistriata var. inflata Pseudostaurosira perminuta Pseudostaurosira zeillerii Pteroncola inane Reimeria sinuata Rhabdonema arcuatum Rhabdonema minutum Rhizosolenia delicatula Rhizosolenia fragilissima Rhizosolenia hebetata fo. semispina Rhizosolenia pungens Rhizosolenia setigera Rhoicosigma compactum Rhoicosphenia curvata Rhopalodia acuminata Rhopalodia brebissonii Rhopalodia gibba Scoliotropis latestriata Sellaphora bacillum Sellaphora pupula Skeletonema costatum Skeletonema subsalsum Stauroneis acuta Stauroneis phoenicenteron Stauroneis simulans Stauroneis spicula Staurophora amphioxys Staurophora salina Staurophora wislouchii Staurosira cf. construens var. venter Staurosira construens Staurosira construens var. binodis Staurosira elliptica Stephanodiscus binderanus Stephanodiscus hantzschii Stephanodiscus hantzschii fo. tenuis Stephanodiscus minutulus Stephanodiscus neoastraea Stephanodiscus parvus Stephanodiscus rotula Striatella unipunctata Surirella brebissonii Surirella brightwellii var. baltica Surirella crumena Surirella minuta Surirella striatula Synedra acus Synedra ulna Tabellaria fenestrata Tabellaria flocculosa Tabularia fasciculata Tabularia investiens Tabularia ktenoeides Tabularia tabulata Tabularia waernii Terpsinoë americana Thalassionema nitzschioides Thalassiophysa hyalina Thalassiosira anguste-lineata Thalassiosira baltica Thalassiosira eccentrica Thalassiosira guillardii Thalassiosira hyperborea var. lacunosa Thalassiosira hyperborea var. pelagica Thalassiosira lacustris Thalassiosira levanderi Thalassiosira oestrupii Thalassiosira proschkinae Thalassiosira pseudonana Thalassiosira punctigera Thalassiosira weissflogii Trachyneis aspera Tryblionella apiculata Tryblionella circumsuta Tryblionella coarctata Tryblionella gracilis Tryblionella hungarica Tryblionella levidensis Tryblionella littoralis Tryblionella littoralis Tryblionella navicularis Tryblionella plana Tryblionella plana var. fennica Tryblionella punctata Tryblionella salinarum Undatella quadrata
Book
Volume 1 in a series which has resulted from a joint intercalibration programme of the Baltic Marine Biologists (BMB) Working Group 27. Each species is illustrated with a photograph and extensive references to the appropriate up-to-date information literature. This book can be ordered from http://www.nhbs.com and other internet book stores. In volumes 1-5 the following 500 species are treated, all, illustrated, each on a separate page: Achnanthes amoena Achnanthes bahusiensis Achnanthes bremeyeri Achnanthes brevipes Achnanthes brevipes var. intermedia Achnanthes cf. minuscula Achnanthes dispar Achnanthes fimbriata Achnanthes fogedii Achnanthes groenlandica Achnanthes lemmermannii Achnanthes linkei Achnanthes longipes Achnanthes oblongella Achnanthes pericava Achnanthes submarina Achnanthes vistulana Achnanthidium microcephalum Achnanthidium minutissimum Achnanthidium thermale Actinocyclus normanii Actinocyclus normanii fo. subsalsus Actinocyclus octonarius var. crassus Actinocyclus octonarius var. tenellus Actinoptychus senarius Amphora abludens Amphora acutiuscula Amphora beaufortiana Amphora cf. bacillaris Amphora cf. exigua Amphora cf. tenerrima Amphora coffeaeformis Amphora commutata Amphora copulata Amphora decussata Amphora fogediana Amphora helenensis Amphora holsatica Amphora hyalina Amphora hybrida Amphora laevissima Amphora lineolata Amphora luciae Amphora macilenta var. typica Amphora maletractata var. constricta Amphora micrometra Amphora ostrearia var. lineata Amphora ovalis Amphora pediculus Amphora rhombica var. intermedia Amphora robusta Amphora staurophora Amphora subholsatica Amphora veneta Amphora wisei Anaulus balticus Aneumastus minor Aneumastus tusculus Anomoeoneis sphaerophora fo. costata Anomoeoneis sphaerophora fo. sculpta Anorthoneis vortex Ardissonea crystallina Ardissonea fulgens Asterionella formosa Attheya decora Attheya septentrionalis Aulacoseira islandica Aulacoseira subarctica Bacillaria paxillifer Berkeleya fennica Berkeleya micans Berkeleya rutilans Biremis ambigua Biremis lucens Brachysira aponina Kützing Brachysira vitrea Brebissonia lanceolata Caloneis aemula Caloneis amphisbaena Caloneis amphisbaena fo. subsalina Caloneis bacillum Caloneis crassa Campylodiscus bicostatus Campylodiscus clypeus Campylodiscus echeneis Catenula adhaerens Cavinula cocconeiformis Cavinula pseudoscutiformis Cerataulina pelagica Cerataulus turgidus Chaetoceros affinis Chaetoceros brevis Chaetoceros cf. borealis Chaetoceros cf. fallax Chaetoceros danicus Chaetoceros decipiens Chaetoceros diadema Chaetoceros holsaticus Chaetoceros mitra Chaetoceros muelleri var. subsalsum Chaetoceros similis Chaetoceros simplex Chaetoceros subtilis Chaetoceros throndsenii Chaetoceros wighamii Cocconeis costata Cocconeis disculus Cocconeis molesta var. crucifera Cocconeis neothumensis Cocconeis pediculus Cocconeis peltoides Cocconeis placentula Cocconeis placentula var. euglypta Cocconeis pseudomarginata Cocconeis quarnerensis Cocconeis scutellum Cocconeis speciosa Cocconeis stauroneiformis Coscinodiscus asteromphalus Coscinodiscus granii Coscinodiscus radiatus Coscinodiscus wailesii Cosmioneis pusilla Craticula cuspidata Ctenophora pulchella Cyclostephanos dubius Cyclotella atomus Cyclotella choctawhatcheeana Cyclotella meneghiniana Cyclotella radiosa Cyclotella schumannii Cyclotella stelligera Cylindrotheca closterium Cymatopleura elliptica Cymatopleura solea Cymbella affinis Cymbella cistula Cymbella helvetica Cymbella lanceolata Cymbella pusilla Denticula creticola Denticula sundayensis Denticula tenuis var. crassula Diatoma bottnica Diatoma moniliformis Diatoma tenuis Diatoma vulgaris Dickieia subinflata Didymosphenia geminata Dimeregramma minor Diploneis decipiens var. parallela Diploneis didyma Diploneis domblittensis Diploneis interrupta Diploneis litoralis Diploneis mauleri Diploneis oculata Diploneis smithii Diploneis smithii var. dilatata Diploneis smithii var. pumila Diploneis smithii var. rhombica Diploneis stroemii Diploneis suborbicularis Ditylum brightwellii Donkinia angusta Donkinia recta var. minuta Ellerbeckia arenaria Encyonema caespitosum Encyonema lacustre Encyonema prostratum Encyonema silesiacum Encyonopsis behrei Encyonopsis microcephala Entomoneis paludosa Entomoneis pseudoduplex Entomoneis punctulata Epithemia adnata Epithemia sorex Epithemia turgida Epithemia turgida var. westermannii Eucampia zodiacus Fallacia clepsidroides Fallacia cryptolyra Fallacia florinae Fallacia forcipata Fallacia litoricola Fallacia plathii Fallacia pseudolitoricola Fallacia pseudony Fallacia pygmaea Fallacia tenera Fragilaria amicorum Fragilaria capucina Fragilaria crotonensis Fragilaria gedanensis Fragilaria heidenii Fragilaria hyalina var. durietzii Fragilaria inflata var. istvanffyi Fragilaria parasitica Fragilaria striatula Fragilaria vaucheriae Fragilariopsis cylindrus Frustulia creuzburgensis Gomphocymbella ancyli Gomphonema acuminatum var. coronatum Gomphonema olivaceum Gomphonema parvulum Gomphonemopsis exigua Gomphonemopsis exigua var. platypus Gomphonemopsis pseudexigua Grammatophora marina Grammatophora oceanica Guinardia flaccida Gyrosigma acuminatum Gyrosigma attenuatum Gyrosigma balticum Gyrosigma eximium Gyrosigma fasciola Gyrosigma macrum Gyrosigma strigilis Hantzschia virgata Hantzschia virgata var. gracilis Hantzschia virgata var. wittii Haslea crucigera Haslea crucigeroides Haslea ostrearia Hustedtiella baltica Hyalodiscus scoticus Hyalosira delicatula Karayevia clevei Leptocylindrus danicus Leptocylindrus minimus Licmophora abbreviata Licmophora communis Licmophora dalmatica Licmophora debilis Licmophora gracilis var. anglica Licmophora hyalina Licmophora oedipus Licmophora rhombica Lunella bisecta Luticola mutica Lyrella sulcifera Martyana atomus Martyana martyi Martyana schulzii Mastogloia baltica Mastogloia braunii Mastogloia elliptica Mastogloia exigua Mastogloia lanceolata Mastogloia pumila Mastogloia pusilla Mastogloia smithii Mastogloia smithii var. amphicephala Melosira arctica Melosira lineata Melosira moniliformis Melosira nummuloides Melosira varians Melosira westii fo. parva Meridion circulare Navicula aboensis Navicula arenaria Navicula armoricana Navicula bipustulata Navicula bottnica Navicula capitata var. hungarica Navicula clamans Navicula crucicula Navicula cruciculoides Navicula cryptocephala Navicula decussis Navicula digitoradiata Navicula directa Navicula duerrenbergiana Navicula eidrigiana Navicula finmarchica Navicula flanatica Navicula germainii Navicula germanopolonica Navicula gregaria Navicula infirmitata Navicula integra Navicula jentzschii Navicula lanceolata Navicula laterostrata Navicula lesmonensis Navicula margaritiana Navicula meniscus Navicula microdigitoradiata Navicula oblonga Navicula oestrupii Navicula palpebralis Navicula pavillardii Navicula pelagica Navicula peregrina Navicula perminuta Navicula phyllepta Navicula platystoma Navicula portanova Navicula protracta Navicula pseudocrassirostris Navicula radiosa Navicula ramosissima Navicula ramosissima var. torquata Navicula reinhardtii Navicula rhynchocephala Navicula salinarum Navicula scutelloides Navicula slesvicensis Navicula starmachioides Navicula supralitoralis Navicula tripunctata Navicula vanhoeffenii Navicula viminoides Neidium iridis var. amphigomphus Neosynedra provincialis Nitzschia acicularis Nitzschia ardua Nitzschia aurariae Nitzschia bacillum Nitzschia brevissima Nitzschia cf. angustatula Nitzschia cf. distans Nitzschia clausii Nitzschia dippelii Nitzschia dissipata Nitzschia dubia Nitzschia dubiiformis Nitzschia elegantula Nitzschia filiformis Nitzschia frigida Nitzschia frustulum Nitzschia grossestriata Nitzschia heufleriana Nitzschia inconspicua Nitzschia littorea Nitzschia lorenziana Nitzschia microcephala Nitzschia paleacea Nitzschia pusilla Nitzschia recta Nitzschia recta var. robusta Nitzschia reversa Nitzschia salinicola Nitzschia scalaris Nitzschia scalpelliformis Nitzschia sigma Nitzschia sigmoidea Nitzschia thermaloides Nitzschia valdestriata Nitzschia vitrea Odontella aurita Odontella mobiliensis Odontella sinensis Opephora marina Opephora olsenii Paralia sulcata Parlibellus berkeleyi Parlibellus delognei Parlibellus hamulifer Parlibellus plicatus Pauliella taeniata Petrodictyon gemma Petroneis granulata Petroneis humerosa Petroneis latissima Petroneis marina Petroneis monilifera Pinnularia acuminata Pinnularia appendiculata Pinnularia cruciformis Pinnularia elegans Pinnularia halophila Pinnularia lundii Pinnularia mesolepta Pinnularia neomajor Pinnularia quadratarea Placoneis clementis Placoneis gastrum Placoneis placentula Plagiogramma staurophorum Plagiotropis lepidoptera Plagiotropis tayrecta Plagiotropis vanheurckii Plagiotropis vitrea Planothidium calcar Planothidium delicatulum Planothidium dubium Planothidium frequentissimum Planothidium oestrupii Planothidium rostratum Planothidium septentrionalis Pleurosigma aestuarii Pleurosigma angulatum Pleurosigma elongatum Pleurosigma formosum Pleurosigma lanceolatum var. cuspidatum Pleurosigma salinarum Pleurosigma subsalsum Pleurosira laevis fo. polymorpha Porosira glacialis Proboscia alata Proschkinia poretzkajae Psammodictyon panduriforme var. continua Psammothidium bioretii Psammothidium punctulatum Psammothidium rossii Pseudogomphonema kamtschaticum Pseudonitzschia pseudodelicatissima Pseudonitzschia pungens Pseudosolenia calcar-avis Pseudostaurosira brevistriata Pseudostaurosira brevistriata var. inflata Pseudostaurosira perminuta Pseudostaurosira zeillerii Pteroncola inane Reimeria sinuata Rhabdonema arcuatum Rhabdonema minutum Rhizosolenia delicatula Rhizosolenia fragilissima Rhizosolenia hebetata fo. semispina Rhizosolenia pungens Rhizosolenia setigera Rhoicosigma compactum Rhoicosphenia curvata Rhopalodia acuminata Rhopalodia brebissonii Rhopalodia gibba Scoliotropis latestriata Sellaphora bacillum Sellaphora pupula Skeletonema costatum Skeletonema subsalsum Stauroneis acuta Stauroneis phoenicenteron Stauroneis simulans Stauroneis spicula Staurophora amphioxys Staurophora salina Staurophora wislouchii Staurosira cf. construens var. venter Staurosira construens Staurosira construens var. binodis Staurosira elliptica Stephanodiscus binderanus Stephanodiscus hantzschii Stephanodiscus hantzschii fo. tenuis Stephanodiscus minutulus Stephanodiscus neoastraea Stephanodiscus parvus Stephanodiscus rotula Striatella unipunctata Surirella brebissonii Surirella brightwellii var. baltica Surirella crumena Surirella minuta Surirella striatula Synedra acus Synedra ulna Tabellaria fenestrata Tabellaria flocculosa Tabularia fasciculata Tabularia investiens Tabularia ktenoeides Tabularia tabulata Tabularia waernii Terpsinoë americana Thalassionema nitzschioides Thalassiophysa hyalina Thalassiosira anguste-lineata Thalassiosira baltica Thalassiosira eccentrica Thalassiosira guillardii Thalassiosira hyperborea var. lacunosa Thalassiosira hyperborea var. pelagica Thalassiosira lacustris Thalassiosira levanderi Thalassiosira oestrupii Thalassiosira proschkinae Thalassiosira pseudonana Thalassiosira punctigera Thalassiosira weissflogii Trachyneis aspera Tryblionella apiculata Tryblionella circumsuta Tryblionella coarctata Tryblionella gracilis Tryblionella hungarica Tryblionella levidensis Tryblionella littoralis Tryblionella littoralis Tryblionella navicularis Tryblionella plana Tryblionella plana var. fennica Tryblionella punctata Tryblionella salinarum Undatella quadrata
Article
This is the first part of a comprehensive critical examination of the Pinnatae group in Surirella, dealing with the most abundant or most discussed taxa. Aided by LM and SEM comparisons with type materials, the diagnoses and usual concepts of various taxa have been verified, completed or revised. The observations include in particular: S.ovális Brébisson, S.ovata Kützing, S.crumena Brébisson, S.peisonis Pantocsek, S.brightwellii W.Smith, S.patella Kützing, S.minuta Brébisson and S.angusta Kützing. In addition we discuss a number of infraspecific taxa, questionable or confirmed synonyms and conspecificities with further taxa. Two races (‘Sippen’) are described as new taxa. One of them was found included in the syntype material of S. ovalis and in a sample with Brébisson's notation ‘Surirella ovalis’, and both have been confused with other established taxa until recently. These taxa can only be identified reliably if entire populations rather than single specimens are studied, on account of morphological variation occurring during the normal vegetative life cycle.