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Meiotic studies of the hybrids among Pseudoroegneria cognata, Elymus semicostatus and E. pendulinus (Poaceae)

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Intergeneric and interspecific crosses were made among Pseudoroegneria cognata (Hackel) A. Löve (2n=14, SS), Elymus semicostatus (Nees ex Steud.) Melderis (2n=4x=28, SSYY) and E. pendulinus (Nevski) Tzvelev (2n=4x=28. SSYY), collected in Pakistan and China. Chromosome pairing and numerical analysis of meioses were studied in the hybrids. Meiotic configurations of all triploid hybrids fit a 2:1 model with X-values ranging from 0.924 to 0.979, and those of tetraploid combinations fall into a 2:2 model with X-values ranging from 0.883 to 0.939. It is concluded from the sludy that (i) the “S” genome in P. cognata is more closely related to E. semicostatus than to that in E. pendulinus; (ii) the “SSYY” genomes of E. semicostatus and E. pendulinus are slightly differentiated from one another; and (iii) a certain degree of homoeology exists between “S” and “Y” genomes of the species studied.
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Hereditas
114: 117-124 (1991)
Meiotic studies
of
the hybrids among
Pseudoroegneria cognata,
Elymus
semicostatus
and
E.
pendulinus
(Poaceae)
BAO-RONG LU, BJORN SALOMON and ROLAND VON BOTHMER
Department
of
Crop Genetics and Breeding, The Swedish University
of
Agricultural Sciences.
Svaliiv,
Sweden
Lu,
B.-R.,
SALOMON,
B.
and
BOTHMER,
R.
VON.
1991. Meiotic studies of the hybrids among
Psuudoroe,y-
neria cognata. Eiymus semicostatus and
E.
penduiinus
(Poaceae).
-
Hereditas
114:
I
17-124.
Lund,
Sweden. ISSN
0018-0661.
Received October 29, 1990. Accepted December 17, 1990
Intergeneric and interspecific crosses were made among Pseudoroegneria cognata (Hackel)
A.
Love
(2n=14,
SS),
Elymus semicostatus (Nees ex Steud.) Melderis (2n=4x=28,
SSYY)
and
E.
pendulinirs
(Nevski) Tzvelev (2n=4x=28,
SSYY),
collected in Pakistan and China. Chromosome pairing and numerical
analysis of meioses were studied
in
the hybrids. Meiotic configurations of all triploid hybrids fit a
2:l
model with X-values ranging from 0.924
to
0.979, and those of tetraploid combinations fall into a
22
model with X-values ranging from 0.883
to
0.939.
It
is concluded
from
the study that (i) the
“S”
genome
in
P.
cognata is more closely related to
E.
semicostatus than to that in
E.
pendulinus;
(ii)
the
“SSYY”
genomes of
E.
semicostatus and
E.
pendulinus are slightly differentiated from one another; and
(iii)
a
certain degree of homoeology exists between
“S”
and
“Y”
genomes of the species studied.
Roland von Bothmer, Department
of
Crop Genetics and
Breeding,
The Swedish
University
of
A,yric.ri/fura/
Sciences,
S-268
00
Svaiov.
Sweden
Interspecific
or
intergeneric hybridization and
meiotic analyses
of
the hybrids are valuable me-
thods to investigate phylogenetic relationships in
the tribe
Triticeae
Dumort. (STEBBINS and SNYDER
1956; JACOBSEN and BOTHMER I98
1
;
DEWEY 1984;
BOTHMER et al. 1986; Lu et al. 1988; WANG 1989).
Studies of chromosome pairing behaviour in the
intergeneric and interspecific hybrids during meio-
sis may facilitate the understanding of relationships
among genomes of their parental species (BOTHMER
et al. 1986), and investigate the origin of different
genomes in order to illustrate the evolution
of
the
tribe. ALONSO and KIMBER (198 1) and
KIMBER
and
ALONSO (1 98
1)
developed methods to determine the
relative affinity between genomes in triploid and
tetraploid hybrids by a numerical analysis of meio-
sis, which should make the assessment of genomic
relationships of different parental species more ob-
jective.
Pseudoroegneria
A. Love, a newly established
genus (LOVE 1980), includes about
15
perennial
species distributed on open hillsides in the northern
hemisphere (DEWEY 1984; LOVE 1984). According
to DEWEY (1984) and LOVE (1984), this genus con-
tains diploids and autotetraploids with the basic
“S”
genome, whereas WANG et al. (1986) found that the
tetraploid species
P. tauri
(Boiss
&
Bal.)
A.
Love
contained the
“SP’
genomes. The
“S”
genome is
one
of
the most important genomic components,
present in more than half of the perennial Triticeae
species. This genome in combination with other
genomes has formed the basis of polyploid genera,
namely,
Elymus
L.
(SH,
SY,
SHY
and
SPY),
Elytri-
gia
L.
(SSX),
and
Pascopyrum
A. Love (SHJN), cf.
DEWEY (1984) and JENSEN (1990a). Several
in-
tergeneric hybrids have been obtained between di-
ploid species of
Pseudoroegneria,
mainly
P. spicuta
(Pursh)
A.
Love, and tetraploid species
of
E/yrnus
with SSHH genomes in order to produce
SSH
tri-
ploids (DEWEY 1982; LOVE and CONNOR 1982).
These were relatively easy to obtain even without
embryo rescue procedures, which suggests a close
affinity and potential for gene introgression be-
tween the two genera (DEWEY 1984). The intergen-
eric crosses between the Asian diploid
Pseudoroeg-
neria
species
(SS)
and tetraploid
Elymus
species
with the
“SY”
genomes have not been reported.
However, DEWEY
(1
981) published the cytogenetic
behaviour of
P. cognata
(he used the name
Agro-
pyronferganensis
Drob.) together with its genomic
relationship to three tetraploid
Elymus
species con-
taining
“SH”
genomes. JENSEN et al. (1986) publ-
Hereditas
114
11991)
Fig.
1
A-F.
Veio\ii in the rriploid h! hid\
(2n=:!
1
1.
Fig.
A-C.
E(yniir.s
.scniic~ostcztrr,s
x
Pseudororynariu
cognnfu
(HH
2-1731
:rith
7
hi\aleni\
(6
rings
and
I
rod)
and
7
uni\alent\
in
A-B;
2
trivaients indicated
by
arrows,
5
bivalents
(3
:~II$\
and
7
rods!
and
5
univalenrs
in
C.
Fig.
0.
P
(.(~:.itti~i
x
E.
pc~dtilitzus
(BB
6853)
with
1
quadrivalem
indicated
4)
'I
:louhle-headed xron.
!
tri\'alent
indicated
by
a
\ingle-headed arrow.
5
bivalents
(1
ring and
4
rods)
and
4
:init
dun\.
Fig.
E.
F
\~~~f~/l,~~.\~tr~ir.\
x
P
r'o,q,itrtci
tHH
2480)
with
3
trivalents
indicated
by
arrows.
Fig.
F.
Anaphase-
I
ot
i.
wrii/('o\/t//ir.\
x
P.
i
oyriufli.
showing lapping chromosonirs
in
addition
to
;I
bridge indicated
by
an
arrow.
-
3ai-
=
10
prn
Herrditas
114
(1991)
HYBRIDS
OF
PSEUDOROEGNERIA
AND
tLYMUS
12
1
Fig.
2A-F.
Meiosis
of
the tetraploid hybrids
(2n=28)
E.
pendulinus
X
E.
semicostatus.
Fig.
A.
One trivalent indicated
by an arrow,
12
bivalents (6 rings and
6
rods) and
1
univalent (BB 6703).
Fig.
B.
One quadrivalent indicated by an
arrow,
8
bivalents (3 rings and
5
rods) and
8
univalents (BB 6703).
Fig.
C.
Two quadrivalents
(1
ring and
1
chain)
indicated by two double-headed arrows,
1
trivalent indicated by a single-headed arrow, 7 bivalents
(5
rings and
2
rods)
and
3
univalents (BB 6703).
Fig.
D.
One quadrivalent indicated by an arrow,
9
bivalents
(5
rings and
4
rods) and
6
univalents (BB 6764).
Fig.
E.
One chain quadrivalent indicated by an arrow,
10
bivalents
(8
rings and
2
rods) and 4
univalents (BB 6764).
Fig. F.
Anaphase-I, showing a laggard and two chromosomal bridges indicated by arrows.
-
Bar
=
10
pn.
age
of
ca
1
1
(maxiniuni
14)
per
cell
and.
hence.
a
relatively
lot\
frequent)
ot
tiniv:ilent formation.
ca
3
(maximum
7)
per
cell.
Tri-
and
quadrivalent\
\&ere
frequently ob\ervctI. nveruging iilmo\t
0.5
(max-
imum
3)
per
cell
(Fig.
2C).
Lagging chromosomes
M
ere
comnionl~~
obserxd
at
antiphase
I
and
I1
in
all
crosw
and
chromosome
bridyes together
with
f'ragments
M
ere
recorded
in
thc
coinbinations
of
E.
\c/uiuisr~/rrrs
x
Y
('o<q/itifu
and
I:
pt>rih/i/iu.\
x
F.
.\c,/~ii(,~~.s~(r/rt.\
(Fig.
1
F
mcl
2F.l.
Micronuclei
\\ere
ob\er\ed
iii
most ofthe quar-
hc bcst
fitting
tnathem~iticiil
genomic
model\
lor
the triploid and tetraploid hybrids are
pre\ented
cspeciall!
in
the triploid hybrid\.
-r:tbic
1.
\\t-\
1968:
Li
et
al.
1990~;
Jtmsi:N
1990b). There-
fore,
the
triploid hybrids presumably have
"SSY"
genotnes.
and chromosome pairing in the hybrids
must
be attributed
to
the synapsis between the
"S"
genomes from the respective parential species,
P.
cogrrtrttr.
E.
.scniit~ostt~tr~.s
and
E.
pcndulinus.
This
allow
a
direct comparison
to
be
made of the
"S"
genome
in
Eljniirs
species with the original
"S"
genotne
in
the supposed ancestral donor,
Pscu-
tlo/.o('g/ic/-itr.
Meiotic pairing of the combination
P.
(vgrrtrttr
x
E.
.scniic.,j.sttrtirs
with
an
average chiasma
frequent\
of
ca
11-13
in
the two crosses
is
dis-
tinctl) higher than that of
P.
c~qriutu
x
E.
pendu-
/itrrr.\,
nhich
has
iin
average
of
cii
9
chiasmata per
cell.
This result
is
similar to that published by
DE-
\\i.\
(1081
1.
in
which
cii
8-14 chiasmata per cell
MC~C
(herved
in
the
hybrids between
P.
cngntrfu
and three
E/ytui/.\
species with the
"SH"
genome.
.It-\\i.\
et
al.
(
1986)
also
reported similar chromo-
sonic
pairing
figtircs
in
the
combination
E.
crlutu-
vic,r/.v
x
P.
co,prrtrtrr
with
ca
5
chiasmata
per
cell. An
explanation
for
the
different chiasma formation in
thij
\ttidy
i4
that
the
3"
genome
in
the two
Elymus
specie\
had
;I
polyphyletic origin, it., that
E.
ximi-
derii
ed
from different dip1
species.
However.
the
most likely explanation
is
that the
5"
genome
has
been modified
to
a
greater
extent in
E.
/w~rdu/i~ii/s
than
in
I:.
semic~ostutus,
in
other
~vords.
the
"S"
genome in
E.
seniicostdus
show
claw
homology
to
the original
"S"
genome
of
P.
cogrirrfrr
than
to
that in
E. priizduli/irr.s.
Geo-
grnphically,
P.
c'ogirtrru
and
E.
semir'ostufus
are dis-
tributed
in
adjacent
areas
in
North
Pakistan,
v.,herea\
E.
/wdu[i/u/.s,
which grows in Eastern
China
and
South Eastern
USSR,
is isolated from
the
former two
5pecies.
Meiotic
configurations
of
the tetraploid hybr
E.
/wrid/rli/iits
x
E.
seniic'ostutus,
fall
into
the
model with X-values
rllnging
from
0.8834.93
different combinations (Table 4). This indicates that
two genomes in the hybrids arc probably more
closely related to each other than they are to
a
simi-
larly
related
another
pair of genomes. which sup-
ports the
previous
conclusion about the genomic
constitution
(SSYY)
for
t
two species
(Df;wex
1968:
Li
et al.
1990~:
JEN
1990b).
The
meiotic
pairing
in
the
hybrids with
an
average
of
ca
11.5
hi\ dent\
and
ca
1
Y
chiasmata
per
cell sugests that
the
two
genomes
of
E.
.smij(,r)strrtir.s
and
E.
pr/rr/rr-
/i/r//.\
have
been
to
some extent differentiated from
cacti
othcr.
At
Icast four chromosomes always
remained
unpaired.
The
occasional
bridge-fragment
formation may
he
it
result of inversion
or
of
a
sub-
"o.sft/rrr.\
and
E.
[lc~'lrdl//i~ll~s
po
Hereditus
114
(1991)
HYBRIDS
OF
PSEliDOKOtGNtKlA
AND
ELYMLS
123
Table
4.
Observed and calculated meiotic configurations in the triploid and tetraploid hybrids according to ALONSO and KIMBLR
(1
98
I).
and KIMBER and ALONSO
(1981)
Combinations Cross
number *Obs/
Model Univ Rod Ring Triv Chain
quad.
E
wni(o~tatu~
x
P
tognata HH
2478
E.
semicostatus
x
P.
cognata
HH
2480
P.
i’ognata
x
E. pendulinus BB
6853
E.
pendulinus
x
E.
semicostatus BB
6713
E. pendulinus
x
E.
semicostatus BB
6764
obs
2:
I
obs
2:
1
obs
2:
1
obs
2:2
obs
2:2
6.45
6.54
6.72
6.56
7.66
8.23
3.98
3.28
3.71
2.90
1.10 5.65 0.35
0.78 5.71 0.47
2.14 3.20 1.20
2.40 3.14 1.12
4.02 1.88 0.44
3.35 1.67
0.91
5.08 6.18 0.22
5.49 5.67 0.32
4.61 6.76 0.28
5.16 6.14 0.32
0.02
0.08
0.12
0.66
0.16
0.38
Ring
quad.
-
0.08
0.02
0.02
0.03
C
x
ss
0.936 0.979 0.129
0.78
1
0.924 0.103
0.607 0.X83 1.038
0.663 0.939 0.979
0.688 0.932 1.647
*
ObdModel
=
Ohaerved or Model;
Univ
=
univalents; Rod
=
rod
bivalents;
Ring
=
ring
bivalents; Triv
=
trivalents; Chain
quad
=
chain
quadrivalents:
Ring
quad
=
ring
quadrivalent5:
c
=
mean arm
pairing
frequency;
x
=
relative
affinity
of
the most closely
related genomes:
SS
=
Sum
of
squares
chromatid (“U”-type) exchange
(
JONSE
and
BRUMP-
Elymus
canadensis
X
Agropyron
caninum, A.
trac~h~cuulim.
and A. striatum.
-
Am.
.I.
But.
55:
1
133-1
139
DEWEY, D. R.
1970.
The origin of Agi-opyron alhicans.
-
An?.
./.
DEWEY, D. R.
1981.
Cytogenetics of ARropyronfer~~orrensis and
TON
1971).
Average frequencies
of
ca
0.5
multivalents per
cell were observed in both SSY- and SSYY-hy-
Bar,
,-,
12-18
brids, with
a
maximum of three per cell in the two
combinations.
It is
possible, therefore, that chromo-
somal structural rearrangements, e.g., transloca-
tions, have arisen between parental chromosomes,
but it is more likely that
a
certain degree of homoe-
ology exists between the
“S”
and
“Y”
genomes in
these
Elymus
species, as suggested previously
(Lu
and
BOTHMER
1989, 1990; Lu et al. 1990a).
Arknowkfgements.
-
We thank Dr T.
Sall
for kindly assisting
with the calculation of a meiotic model for the tetraploids. We are
also grateful to prof.
N.
Jacobsen, Copenhagen for supplying two
of
the hybrids and to Mr.
R.
Pickering for kindly correcting the
English language.
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natural
h)hrid\
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... E. semicostatus is also a highly variable species showing a wide range of genetic and morphogenetic variations (Lu and Salomon 1993;Salomon 1994). The species is allotetraploid and belongs to "SY" genomic constitution group (Lu et al. 1991), which made it central genome "analyser species" to check the genomic constitution of other species through cytological analysis of artificially produced hybrids (Sakamoto and Muramatsu 1966;Lu et al. 1990Lu et al. , 1991Lu and Bothmer 1990a;Salomon and Lu 1992, 1994a, 1994bLu and Salomon 1993). Salomon (1994) in his revisionary studies on genus Elymus has considered E. semicostatus as "centre species" and has ascribed nearly nine taxa in Elymus semicostatus group based on common SY genome, and morphological characters. ...
... E. semicostatus is also a highly variable species showing a wide range of genetic and morphogenetic variations (Lu and Salomon 1993;Salomon 1994). The species is allotetraploid and belongs to "SY" genomic constitution group (Lu et al. 1991), which made it central genome "analyser species" to check the genomic constitution of other species through cytological analysis of artificially produced hybrids (Sakamoto and Muramatsu 1966;Lu et al. 1990Lu et al. , 1991Lu and Bothmer 1990a;Salomon and Lu 1992, 1994a, 1994bLu and Salomon 1993). Salomon (1994) in his revisionary studies on genus Elymus has considered E. semicostatus as "centre species" and has ascribed nearly nine taxa in Elymus semicostatus group based on common SY genome, and morphological characters. ...
... Since then, owing to its wider distribution and morphogenetic diversity the species has been examined cytologically by a number of cytologists from the Indian states of Jammu and Kashmir, Himachal Pradesh and Uttarakhand (Mehra and Sharma 1972, 1975Sharma and Sharma 1979;Salomon 1994;Salomon and Lu 1994b;Singhal et al. 2014;Kumari and Saggoo 2016); and outside India i.e. Nepal, Pakistan and Afghanistan (Tateoka 1955;Matsumura et al. 1956;Lu et al. 1990Lu et al. , 1991Lu et al. , 1995Lu and Bothmer 1990a, 1990b, 1993a, 1993bSalomon and Lu 1992, 1994a, 1994bLu 1993;Lu and Salomon 1993;Moinuddin et al. 1994;Salomon 1994). ...
Article
Full-text available
The present study includes chromosome count, meiotic abnormalities, pollen fertility and karyotype of Elymus semicostatus from north-west Himalaya, India. This is the first attempt to present karyotype morphometric data of the species from India [2n = 4x = 28 = 22m (2sat) + 6sm]. At present 28 wild accessions of the species have been analysed, all of which shared the same tetraploid (4x) chromosome count of 2n = 28. In addition, seven accessions also showed the presence of 0–2 B-chromosomes in the meiocytes. Meiotic abnormalities were frequent and 17 accessions showed the phenomenon of cytomixis, involving chromatin transfer among meiocytes and associated meiotic irregularities in spindle activity and chromosomal segregation. Consequent to such meiotic abnormalities, these accessions showed pollen malformation in the form of sterile and variable sized pollen grains. Cytomixis in the species seems to be a natural phenomenon under the control of genetic factors and is responsible for inducing meiotic disturbance and pollen malformation.
... E. semicostatus is also a highly variable species showing a wide range of genetic and morphogenetic variations (Lu and Salomon 1993;Salomon 1994). The species is allotetraploid and belongs to "SY" genomic constitution group (Lu et al. 1991), which made it central genome "analyser species" to check the genomic constitution of other species through cytological analysis of artificially produced hybrids (Sakamoto and Muramatsu 1966;Lu et al. 1990Lu et al. , 1991Lu and Bothmer 1990a;Salomon and Lu 1992, 1994a, 1994bLu and Salomon 1993). Salomon (1994) in his revisionary studies on genus Elymus has considered E. semicostatus as "centre species" and has ascribed nearly nine taxa in Elymus semicostatus group based on common SY genome, and morphological characters. ...
... E. semicostatus is also a highly variable species showing a wide range of genetic and morphogenetic variations (Lu and Salomon 1993;Salomon 1994). The species is allotetraploid and belongs to "SY" genomic constitution group (Lu et al. 1991), which made it central genome "analyser species" to check the genomic constitution of other species through cytological analysis of artificially produced hybrids (Sakamoto and Muramatsu 1966;Lu et al. 1990Lu et al. , 1991Lu and Bothmer 1990a;Salomon and Lu 1992, 1994a, 1994bLu and Salomon 1993). Salomon (1994) in his revisionary studies on genus Elymus has considered E. semicostatus as "centre species" and has ascribed nearly nine taxa in Elymus semicostatus group based on common SY genome, and morphological characters. ...
... Since then, owing to its wider distribution and morphogenetic diversity the species has been examined cytologically by a number of cytologists from the Indian states of Jammu and Kashmir, Himachal Pradesh and Uttarakhand (Mehra and Sharma 1972, 1975Sharma and Sharma 1979;Salomon 1994;Salomon and Lu 1994b;Singhal et al. 2014;Kumari and Saggoo 2016); and outside India i.e. Nepal, Pakistan and Afghanistan (Tateoka 1955;Matsumura et al. 1956;Lu et al. 1990Lu et al. , 1991Lu et al. , 1995Lu and Bothmer 1990a, 1990b, 1993a, 1993bSalomon and Lu 1992, 1994a, 1994bLu 1993;Lu and Salomon 1993;Moinuddin et al. 1994;Salomon 1994). ...
Article
The present study includes chromosome count, meiotic abnormalities, pollen fertility and karyotype of Elymus semicostatus from north-west Himalaya, India. This is the first attempt to present karyotype morphometric data of the species from India [2n = 4x = 28 = 22m(2sat) + 6sm]. At present 28 wild accessions of the species have been analysed, all of which shared the same tetraploid (4x) chromosome count of 2n = 28. In addition, seven accessions also showed the presence of 0–2 B-chromosomes in the meiocytes. Meiotic abnormalities were frequent and 17 accessions showed the phenomenon of cytomixis, involving chromatin transfer among meiocytes and associated meiotic irregularities in spindle activity and chromosomal segregation. Consequent to such meiotic abnormalities, these accessions showed pollen malformation in the form of sterile and variable sized pollen grains. Cytomixis in the species seems to be a natural phenomenon under the control of genetic factors and is responsible for inducing meiotic disturbance and pollen malformation.
... Cytological analyses have identified five basic genomes (St, H, Y, P, and W; genome symbols follow those of Wang et al. 1994) in the genus. The St genome found in all species of Elymus was supposedly donated by Pseudoroegneria (Nevski) Á Löve (Lu et al. 1991;Salomon and Lu 1994). The H, P, and W genomes are derived from Hordeum L., Agropyron Gaetn., and Australopyrum (Tzvelev) Á Löve, respectively; while the origin of the Y genome is still unclear and subject to debate (Dewey 1971;Torabinejad and Mueller 1993;Jensen and Salomon 1995;Liu et al. 2006;Sun and Salomon 2009). ...
... These phenomena have been considered as the causes of shared polymorphism across ploidy level and (or) phylogenetic incongruence among loci (Weissmann et al. 2005;Hedrén et al. 2008;Brokaw and Hufford 2010). Keng and Chen (1963) examined the variations in spike length and lemma vestiture within E. pendulinus, but there has been little examination on its genetic variation, allopolyploid origin, and evolutionary history, all of which remain poorly explained (Jensen 1990;Lu et al. 1991;Zhou et al. 1999). ...
... A recent study by Koch and Matschinger (2007) suggested that chloroplast introgression has become less common in recent times. Elymus pendulinus has been shown to hybridize with other species (Lu et al. 1991;Salomon and Lu 1994;Zhou et al. 1999), demonstrating at least some potential to acquire genetic material through introgression. Moreover, both nuclear gene data of ZAR 0714 contained the St copy. ...
Article
Full-text available
Evidence accumulated over the last decade has shown that allopolyploid genomes may undergo complex reticulate evolution. In this study, 13 accessions of tetraploid Elymus pendulinus were analyzed using two low-copy nuclear genes (RPB2 and PepC) and two regions of chloroplast genome (Rps16 and trnD-trnT). Previous studies suggested that Pseudoroegneria (St) and an unknown diploid (Y) were genome donors to E. pendulinus, and that Pseudoroegneria was the maternal donor. Our results revealed an extreme reticulate pattern, with at least four distinct gene lineages coexisting within this species that might be acquired through a possible combination of allotetraploidization and introgression from both within and outside the tribe Hordeeae. Chloroplast DNA data identified two potential maternal genome donors (Pseudoroegneria and an unknown species outside Hordeeae) to E. pendulinus. Nuclear gene data indicated that both Pseudoroegneria and an unknown Y diploid have contributed to the nuclear genome of E. pendulinus, in agreement with cytogenetic data. However, unexpected contributions from Hordeum and unknown aliens from within or outside Hordeeae to E. pendulinus without genome duplication were observed. Elymus pendulinus provides a remarkable instance of the previously unsuspected chimerical nature of some plant genomes and the resulting phylogenetic complexity produced by multiple historical reticulation events.
... Another study using internal transcribed spacer sequences identified substantial genetic variation and differentiation between North America-originated Elymus species with the genome composition of StStHH and Elymus species from Eurasia (Wang et al., 2009). While the maternal donor of North America-originated Elymus species might be the Pseudoroegneria species from North America and Asia Pseudoroegneria species participated in the formation of the Elymus species from Asia (Lu et al., 1991), further investigation is needed to determine the specific origin of these species. Several hypotheses have been proposed to explain the origination of the Y genome in Elymus species. ...
... Several hypotheses have been proposed to explain the origination of the Y genome in Elymus species. According to studies conducted by Lu's group (Lu et al., 1991;Lu & Salomon, 1992;Liu et al., 2006), it was suggested that the Y genome shared a common ancestor with the St genome (Pseudoroegneria) based on cytological and molecular research. In contrast, a molecular study focusing on the RPB2 gene conducted by Sun et al. (2008) found evidence suggesting that the St and Y genomes had different origins. ...
Article
Full-text available
Quaternary glacial climate oscillation and geographical isolation have significantly influenced the geographic distribution pattern and lineage evolution history of species. However, understanding how these factors specifically impact the genealogical structure of dominant Gramineous species in the Qinghai–Tibet Plateau (QTP) remains a subject of investigation. Elymus sibiricus L. (Gramineae), indigenous to the QTP and widely distributed in Eurasia, exhibits remarkable environmental adaptation and phenotypic diversity, making it an ideal candidate for phylogeographic studies. Based on the analysis of 175 complete chloroplast genome sequences, our results indicated that the ancestors of E. sibiricus originated from the QTP and underwent a complex migration history. After the speciation of E. sibiricus , several geo‐groups exhibited independent differentiation, showing minimal gene flow among them. The current phylogeographic patterns of E. sibiricus are a result of frequent climate alternations and the cold climate during the Quaternary glacial, as well as the presence of several geographical barriers that have restricted the gene flow among different geo‐groups. Our research has revealed for the first time that E. sibiricus has a multilineage origin, and its maternal donors are not limited to a single species. Furthermore, the high quality and mapping depth of the variant file provided reliable data for analyzing the patterns based on raw sequencing data. These findings enhance our understanding of the relationship between plant differentiation and climatic and geographical factors of Eurasia.
... The Core Southern rDNA was found in Elytrigia repens and in diploid Pseudoroegneria strigosa, as well as in some other Pseudoroegneria species: P. spicata (haplome St or StX - Wang et al., 1986), and P. sosnovskyi (haplome St - Assadi, 1994). On the other hand, the Core Northern St-ribotype is characteristic feature of P. cognata (2n = 14 - Lu et al., 1991) and P. spicata (PI 232134, 2n = 14 -Okino et al., 2009) The "Northern dahuricus" St-rDNA and "Southern dahuricus" St-rDNA (ribotypes) are derivatives of these two base types of rDNA, "Core Southern" and "Core Northern". There are 6 SNPs and one deletion that delimited consensus sequences of the "Core Southern" and "Core Northern" ribotypes (Fig. 3). ...
Article
Full-text available
Nuclear ribosomal internal transcribed spacer (ITS) sequences were sequenced for 23 species and subspecies of Elymus sensu lato collected in Russia. The Neighbor-Net analysis of ITS sequences suggested that there are four ribotypes called Core Northern St-rDNA, Core Southern St-rDNA, Northern dahuricus St-rDNA and Southern dahuricus St-rDNA. The Core Southern variant of St-rDNA is closely related to rDNA of diploid Pseudoroegneria stipifolia (PI 313960) and P. spicata (PI 547161). The Core Northern St-rDNA is closely related to rDNA of P. cognata (PI 531720), a diploid species of Kyrgyzstan carrying StY variant of the St genome. The Core Northern St-rDNA is widespread among the Elymus species of Siberia and the Far East, including Yakutia and Chukotka. The Core Southern St-ribotype is typical of southern Elymus and Pseudoroegneria of the South Caucasus, Primorye, Pakistan, and South Korea. The Northern dahuricus St-ribotype and Southern dahuricus St-ribotype are derivatives of the Core Northern and Core Southern St-ribotypes, correspondingly. Both of them were found in all four studied species of the E. dahuricus aggregate: E. dahuricus Turcz. ex Griseb., E. franchetii Kitag., E. excelsus Turcz. ex Griseb. and Himalayan E. tangutorum (Nevski) Hand.-Mazz. In other words, there are at least two population groups (two races) of the Elymus dahuricus aggregate species that consistently differ in their ITS-sequences in Siberia, the Far East and Northern China. Each contains all morphological forms, which taxonomists now attribute either to different species of E. dahuricus aggr. (E. dahuricus sensu stricto, E. franchetii, E. tangutorum, E. excelsus) or subspecies of Campeiostachys dahurica (Turcz. ex Griseb.) B.R. Baum, J.L. Yang et C.C. Yen. At the moment it is unknown if there are any morphological differences between plants carrying either Northern or Southern dahuricus rDNA. Probably, they are cryptic species, but it is certain that if differences in morphology between the two races exist, they are not associated with signs that are now considered taxonomically significant and are used to separate E. dahuricus s. s., E. franchetii, E. tangutorum, and E. excelsus.
... Dewey (1984) speculated that the donor of Y haplome might have once been distributed in central Asia or the Himalayan area but now may be extinct. It was found that St and Y genomes share some similarity (Lu & Bothmer, 1989, 1990aLu et al., 1990bLu et al., , 1991. Based upon their studies of ITS sequences, Liu et al. (2006) also proposed that the St and Y genome might also share a common ancestor. ...
Article
To detect the genomic constitutions and investigate the evolutionary relationships between Campeiostachys and Elymus species, we have cloned and analyzed 271 5S nrDNA sequences from 27 accessions of these species, mostly of Chinese origin. We identified Long H1, Short S1 and Long Y1 unit classes in nine Campeiostachys or Elymus species. The identification of the three orthologous unit classes was confirmed by the NJ tree of each unit class from PAUP and the phylogeny tree of three unit classes from MrBayes. The results suggested that these Elymus species comprise StYH haplomes and should be included in Campeiostachys. The phylogeny tree showed a clear separation between the S1 unit class and Y1 unit class. However, Y1 unit class sequences formed a sister clade to S1 unit class implying while the St and Y haplomes may have some affinity, they are distinct from one another. The phylogeny tree also indicated that the five species in sect. Turczaninovia (C. dahurica var. cylindrica, C. dahurica var. dahurica, C. dahurica var. tangutorum, E. purpuraristatus and E. dahuricus var. violeus) may share a more recent common ancestor, while the four species in sect. Elymus (C. nutans, E. breviaristatus, E. sinosubmuticus and E. atratus) share a close relationship. By identifying only one type of unit class for each haplome, we propose that the 5S nrDNA sequences of species within Campeiostachys may have undergone haplome‐specific concerted evolution.
... E. semicostatus, a tetraploid species showed the gametophytic chromosome number of n=14, confirmed by the presence of 14 bivalents in PMCs at diakinesis (Fig. 1l). Our meiotic chromosome number agrees with the previous somatic chromosome numbers of 2n=28 from Afghanistan (Lu and Bothmer 1993a, b, Lu et al. 1995, Salomon 1994, India (Mehra and Sharma 1972, 1975, 1977, Parkash 1979, Sharma and Sharma 1979, Mehra 1982, Salomon 1994, Salomon and Lu 1994a, b, Singhal et al. 2014, Kumari and Saggoo 2016, Nepal (Tateoka 1955, Matsumura et al. 1956) and Pakistan (Salomon et al., 1988, Lu and Bothmer 1990a, 1993a, b, Lu et al. 1990, 1991, 1995, Salomon and Lu, 1992, 1994a, b, Lu and Salomon, 1993, Moinuddin et al., 1994, Salomon, 1994. In spite of its wide distribution and morphological diversity, the species uniformly exists as tetraploid. ...
Article
Present study explores the meiotic chromosome numbers in seven species of the genus Elymus from Himachal Pradesh and Uttarakhand, India. The study adds the first chromosome number of E. gangotrianus (n=14+0-2B), besides adding chromosome numbers for Indian taxa of E. himalayanus (n=21), E. jacquemontii (n=14), E. schrenkianus (n=21) and E. schugnanicus (n=14). In the genus Elymus polyploidy might have a role in its chromosome evolution.
... This heterogeneous group of allopolyploid combinations is often collectively classified as Elymus sensu lato, as reflected in numerous major floristic works [59][60][61][62]. Under this definition, Elymus comprises StStHH and StStYY tetraploids, and StStStStHH, StStHHHH, StStStStYY, StStYYYY, StStHHYY, StStYYWW, and StStYYPP hexaploids [58,[63][64][65][66][67][68][69][70][71][72][73][74][75][76][77][78]. This group, while united by their shared St genome, is obviously polyphyletic, and there has been recent work toward updating their classification to better reflect differences in genomic content [79][80][81][82]. ...
Article
Full-text available
The grass tribe Triticeae (=Hordeeae) comprises only about 300 species, but it is well known for the economically important crop plants wheat, barley, and rye. The group is also recognized as a fascinating example of evolutionary complexity, with a history shaped by numerous events of auto- and allopolyploidy and apparent introgression involving diploids and polyploids. The genus Elymus comprises a heterogeneous collection of allopolyploid genome combinations, all of which include at least one set of homoeologs, designated St, derived from Pseudoroegneria. The current analysis includes a geographically and genomically diverse collection of 21 tetraploid Elymus species, and a single hexaploid species. Diploid and polyploid relationships were estimated using four molecular data sets, including one that combines two regions of the chloroplast genome, and three from unlinked nuclear genes: phosphoenolpyruvate carboxylase, β-amylase, and granule-bound starch synthase I. Four gene trees were generated using maximum likelihood, and the phylogenetic placement of the polyploid sequences reveals extensive reticulation beyond allopolyploidy alone. The trees were interpreted with reference to numerous phenomena known to complicate allopolyploid phylogenies, and introgression was identified as a major factor in their history. The work illustrates the interpretation of complicated phylogenetic results through the sequential consideration of numerous possible explanations, and the results highlight the value of careful inspection of multiple independent molecular phylogenetic estimates, with particular focus on the differences among them.
Article
The genus Elymus L. in the tribe Triticeae (Poaceae) includes economically and ecologically important forage grasses. The genus contains the pivotal St genome from Pseudoroegneria in combinations with other genomes in the tribe. Many Elymus species are tetraploids containing the StY genomes. Apparently, polyploidization characterizes the speciation of the genus in which the Y is considered as another key genome. Based on data from cytological, genome in situ hybridization (GISH), and molecular studies, we hypothesized an endo‐allopolyploidy origin of the StY‐genome species from autotetraploid Pseudoroegneria species. To test the hypothesis, we amplified, cloned, and sequenced five single‐copy nuclear genes (i.e., alcohol dehydrogenase 1‐3, Adh 1‐3, RNA polymerase II, Rpb 2; and Waxy ) from Elymus , Pseudoroegneria , and Hordeum species. The phylogenetic trees constructed based on the sequencing analyses of all genes indicated that diploid and autotetraploid Pseudoroegneria species were closely related although with considerable genetic variation in tetraploids. In addition, the StY‐genome Elymus species tended to have a close relationship with the diploid and autotetraploid Pseudoroegneria species, although different phylogenetic relationships among the gene trees were detected. These results indicated that the StY‐genome species may have an autotetraploid origin and experienced recurrent hybridization. The complex St genomes in Pseudoroegneria in the polyploid state may gain more opportunities for within‐species differentiation and recurrently hybridization. As a result, series modified versions of St genomes evolved into the StY genomes in some Elymus species. This article is protected by copyright. All rights reserved.
Article
The analysis of chromosome pairing during meiosis is important for understanding the relationships between different genomes. To evaluate the diversity of chromosome pairing behavior in the wild species of Roegneria sinica var. media Keng with St and H genomes in Triticeae (Poaceae), differences and similarities in the meiotic chromosome pairing behaviors of the two genomes in two populations of R. sinica var. media, were analyzed using genomic in situ hybridization. Chromosome pairing at meiotic metaphase I in the two populations of R. sinica var. media mainly formed bivalents, although several univalents, trivalents and quadrivalents also occurred. Chromosome pairings occurred mainly between homologous chromosomes. However, some non-homologous pairings were observed under natural conditions. No significant differences in karyotype were found between the St and H genomes. Chromosome pairing behaviors differed between and within the two populations. Genetic variation occurred mainly within populations (94.04 %), and variation was more abundant in one population than the other. The genomes St and H differed, but there was some relationship between the two genomes. These findings suggest that homoeologous pairing of chromosomes or exchanges occurred between different genomes of the wild species in Triticeae during evolution. The findings also provide conclusive cytological evidence for genetic variation within the wild species, which forms the basis of their genetic diversity. © 2016 Korean Society for Plant Biotechnology and Springer Japan
Article
Meiosis and mode of reproduction are described in Agropyron ferganense Drob., a perennial forage grass from Central Asia. This species is diploid (2n = 14); it exhibits normal meiosis and reproduces by cross-pollination. Hybrids were produced between A. ferganense and six species with known genome formulas: 1) North American A. spicatum (Pursh) Scribn. & Smith, an SS diploid (2n = 14), 2) Middle Eastern A. libanoticum Hack., an SS diploid (2n = 14), 3) North American A. dasystachyum (Hook.) Scribn., an SSHH tetraploid (2n = 28), 4) Eurasian A. caninum (L.) Beauv., an SSHH tetraploid (2n = 28), 5) North American Sitation hystrix (Nutt.) J. G. Smith, an SSHH tetraploid (2n = 28), and 6) South American Elymus patagonicus Speg., an SSHHHH hexaploid (2n = 42). Almost complete chromosome pairing in the A. ferganense x A. spicatum and A. libanoticum hybrids demonstrated that A. fergenanse is an SS diploid, but it is genetically isolated from the other SS diploids because of high sterility in the F1 hybrids. S-genome diploids form a network of species that extend from the Middle East through Central Asia to western North America. Frequent occurrence of seven univalents and seven bivalents at metaphase I in the triploid hybrids of A. ferganense x A. dasystachyum, A. caninum and S. hystrix was consistent with the proposed genome formulas of SS for A. ferganense, SSHH for the three tetraploid species, and SSH for the hybrids. Chromosome pairing was highly variable in the A. ferganense x E. patagonicus hybrids; however, some cells had almost complete bivalent pairing, an expected observation in an SSHH hybrid from a cross between an SS diploid (A. ferganense) and an SSHHHH hexaploid (E. patagonicus). Various options were considered concerning the appropriate generic classification of the S-genome diploids, which are now commonly placed in Agropyron. The inclusion of these species in the genus Eiytrigia, as advocated by some Soviet taxonomists, appears to be a reasonable decision.
Article
Previous suggestions of introgression between Agropyron spicatum (Pursh) Scribn. & Smith, 2n = 14 & 28, and Agropyron dasystachyum (Hook.) Scribn., 2n = 28, were confirmed. Fertile, meiotically regular, 28-chromosome plants morphologically identical to Agropyron albicans Scribn. & Smith, 2n = 28, occurred in first- and second-generation open-pollination progenies of diploid A. spicatum × A. dasystachyum hybrids, presumably by backcrossing to A. dasystachyum. These A. albicans-like derivatives were fully cross-compatible with naturally occurring A. albicans. First and second generation open-pollination progeny of tetraploid A. spicatum × A. dasystachyum F1's contained approximately 5% A. albicans-like plants; but none was tetraploid, cytologically stable, and fertile. Although introgression occurs freely between tetraploid A. spicatum and A. dasystachyum, derivation of fertile true-breeding A. albicans from their early-generation progeny seems unlikely. Agropyron griffithsii Scribn. & Smith ex. Piper, the glabrous counterpart of A. albicans, probably originated from hybrids between diploid A. spicatum and Agropyron riparium Scribn. & Smith, the glabrous form of A. dasystachyum. Genome formulas of diploid A. spicatum, A. dasystachyum (riparium), and A. albicans (griffithsii) may be written as S1S1, S2S2XX, and S1-2 S1-2XX, respectively. The relationship between A. albicans and A. dasystachyum is so close that A. albicans should be regarded as no more than a subspecies of A. dasystachyum.