Habitat identification and habitat mapping are fundamental in determining locations of potential protected areas although both requisites are challenging, especially in the deep sea. This study presents the results on sea floor habitat identification and mapping of a NE Atlantic seamount (Galicia Bank, NW Iberian), the deepest SAC of the Spanish Natura 2000 proposal. An “‘assemble first, predict later” approach has been followed to identify and map the benthic habitats of the GB. Biotic patterns inferred from the survey data have been used to drive the definition of benthic assemblages using multivariate tools. 9 assemblages, 5 in hard substrates and 4 in sedimentary ones, have been described from a matrix of structural species. Rocky habitats clustering pattern is not determined by depth as first factor, but for a combination of slope and orientation. Cluster groups are typified by the combination of structural taxa as are cold-water corals, bamboo corals, black corals, gorgonians and large sponges. Five rocky assemblages are: i) Bank Summit Plain Rock (SPR); habitat is typified by antipatharians as Parantipathes sp, Trissopathes sp and Schizopathes sp, and Octocorallia as the gorgonian species Acanthogorgia sp, Swiftia rosea and Narella sp. ii) Summit and Bank Break Rock (SBBR): typified by Antipatharia, Octocorallia and large Porifera. The sponges Aphrocallistes beatrix, other Hexactinellida undet., and Geodidae undet., the black coral Bathypathes sp., the gorgonians Acanthogorgia sp. and Swiftia rosea, and the seastar Brissinga endecacnemos were the most discriminating species. iii) Bank Break Rock subgroup 1 (BBR1): located in the northern and eastern slopes of the bank. Typified by gorgonians (Swiftia rosea, others), bamboo corals (Acanella arbuscula, Isididae undet.) and black corals (Schizopathes sp, Trissopathes sp, Parantipathes sp). iv) Bank Break Rock subgroup 2 (BBR2): Deepest rock samples. Typified by gorgonians (Swiftia rosea, Anthothela grandiflora), bamboo corals (Acanella arbuscula), black corals (Parantipathesssp) and large sponges as Asconema setubalense, Phakellia robusta, Hexactinellida undet). v) Bank Break Rock Southern slopes (BBRS): Located in the southern slope and in the Rucabado mount. With presence of colonies of cold water corals (Madrepora oculata, Lophelia pertusa), and a companion fauna similar to the latter groups, as gorgonians (Swiftia rosea), bamboo corals (Acanella arbuscula), black corals (Schizopathes ssp) and large sponges as Asconema setubalense or Aphrocallistes beatrix. There are clear differences in habitat complexity among assemblages, being BBRS the most complex assemblage in terms of biogenic structures, and the SPR the simplest. BBRS complexity can be explained in part for the higher presence of colonial scleractinia (mostly Lophelia and Madrepora). In the soft bottoms, main factors explaining clusters are depth, substrate type and water masses. Four aasemblages are: The 4 assemblages identified for sedimentary habitats are: i) Summit Sands (SS): shallowest samples (750-780 m), substrate of medium sands of low reflectivity, affected by the ENACW. Sands dwelled by a huge amount (9.5 kg/ha) of ophiuroids of the family Ophiacanthidae (Ophiacantha sp. and Ophiomyces grandis), and with lower densities the solitary coral Deltocyathus moseleyi and Flabellum chunii, and the bivalve Limopsis spp. (L. minuta and L. cristata). ii) Summit Sands with reef patches (SSrf) Substrate of medium sands of low reflectivity with depths ranged from 780 to 1000 m, also in the ENACW layer. Sands covered by patches of cold-water coral colonies (Lophelia pertusa and Madrepora oculata, 3.3 and 3.2 kg/ha of live coral). Together with these two scleractinian species, typifying species mostly are species living on coral as Desmophyllum cristagalli, Acanthogorgia spp., Lima marioni, Parantipathes sp., and as mobile fauna different species of Munidopsis and Uropthychus. iii) Bank Break Sands (BBS): substrate of medium sands of medium reflectivity located in depths ranged from 1000 to 1200 m, in the MOW layer. Sands dominated by the urchin Cidaris cidaris, and the sponge Thenea muricata. iv) Bank Flanks Sands (FS): fine and very fine sands of low reflectivity in depths ranged from 1400 to 1800 m, LSW mass. Clearly dominated by the holothurian Elasipodidae Benthogone rosea (6.3 kg/ha), companied by the leather urchin Araeosoma fenestratum, and several anthozoa as Umbellula sp., Acanella arbuscula and Swiftia rosea. Distribution of these 9 assemblages was correlated with environmental factors using binomial General Additive Models (GAMs). Finally, the distribution model of each assemblage were applied to produce continuous maps with the location of the main habitats located in the GB and pooled in a final map with the distribution of the main benthic habitats of GB. Results of this study was used in the Spanish proposal of inclusion in the Natura 2000 network due to the wide range of species and habitats of high conservation value found here, such as Lophelia and Madrepora communities and black and bamboo coral aggregations. The aim of present study is to establish a scientific basis for managing and protecting those environmental values.