... In the network model, we included only the ones which seem to be most important. F. Network definition and reference for molecular interactions Myc E2F [6], MAPK [6,7], Notch [8], SHH [9], Wnt [10], pRb [6] AP2 [11], TGF-β [12,13], p53 [6] p21 AP2 [14], GR [15], Gata1/2 [16], HNF4α [17], Runx1 [18], TGF-β [13], TNF-α [19], p53 [6,19] Akt [4], Hes1 [20], Myc [19,21] p27 E-Cadherin [22], Gata1/2 [23], NR4A [24], PTEN [25], TGF-β [26] Akt [25], Hes1 [27], Myc [6] pRb Cyclin D/Cdk4,6 [1,28], Cyclin E/Cdk2 [1,28] Retinoblastoma protein phosphorylation Ras EGFR [29], FGFR2 [30], HGF [31], IL-6 [32,33], IR [34], VEGF [35,36] GR [37], p53 [38] Apoptosis Bad TNF-α [39], p53 [40] Akt [41], MAPK [41], NF-κB [42], p21 [43] Bax Bim [44], p53 [45,46] Akt [47], Bcl-2 [48], Sox4 [49] Bcl-2 Integrin [50], NF-κB [51], VEGF [52] Caspase 3 [52], TGF-β [53], p53 [54] Bcl-xL EGFR [55], NF-κB [56], Stat5 [57] Caspase 3 [58] Bim Akt [41], MAPK [41] Caspase HIF [83], IL-1 [84], MAPK [85], NR2F2 [86], Notch [87], SHH [88], Stat5 [89] C/EBPβ AP2 [90], IL-1 [84], MAPK [91] Hoxa3 [92], TGF-β [93] Continued on next page AP2 [107], Foxa2 [108], RARs [109,110] Sox4 [111] Foxa2 C/EBPα [112], RARs [109], SHH [113] Akt [114], PRDM14 [115] Gata1/2 Cdx2 [116], Notch [117], Stat3 [118] Hes1 [119], Hoxa10 [120], Pu.1 [121,122], VEGF [123], c-Jun [124] Gata4/6 PKA [125], Sox7 [126], Wnt [127] Hey2 [128], PRDM14 [115], Sox2 [100,126,129], c-Jun [130] Hes1 ...