Milan Muška

Institute of Hydrobiology, Biology Centre ASCR, Ceske Budejovice, Czech Republic · Fish and zooplankton ecology

Odchyt do živolovných pastí umístěných ve vodním prostředí představuje dnes standardní neinvazivní metodu inventarizace fauny, mimo jiné vodního hmyzu, raků, obojživelníků nebo ryb (např. Jeřábková a Boukal 2011, Kozák a kol. 2007 nebo Mačát a kol. 2010). Přestože v minulosti byly na obdobném principu konstruovány vrše k lovu ondatry pižmové (Ondat...

Understanding inter-annual variation in the density of young-of-the-year fish is an important tool for assessing stock status and guiding management decisions. We analyzed data spanning from 2003 to 2022 collected at Lipno Reservoir in Czechia. The study aimed to identify factors influencing the density of pikeperch (Sander lucioperca), a valuable...

Day and nighttime autumn fish abundance and biomass were studied in the pelagic and littoral zones of Lake Sauka in Latvia. Both pelagic methods (hydroacoustics and trawling) revealed significantly higher fish abundance and biomass during the day than at night, especially in deeper zones (below 3 m). Roach (Rutilus rutilus) and Eurasian perch (Perc...

Global climate change has been altering freshwater ecosystems by impacting many ecological processes, including individual fish growth. Predictions of responses of local fish populations to future environmental change can draw inferences from past long-term biochronological data. In this study, we reconstructed individual growth pattern of one of t...

Fish are an important component of aquatic ecosystems, thus representative and reliable assessments of their population variables are essential for a variety of ecological applications, management and conservation. Determining Fish Density per actual Spatial Unit (volume or area, FDSU) as a measure of absolute fish quantity is of particular interes...

Habitat complexity of freshwater ecosystems has been decreasing due to human impacts. Therefore, conservation and environmental management actions have intensified in the recent years. Artificial floating islands (AFIs) are one environmental management action intended to promote the populations of aquatic organisms. In this study, we installed eigh...

Until 2006, the Lipno Reservoir had the largest catches of pikeperch in the Czech Republic, but since 2007 it has partially collapsed. This collapse was preceded by oligotrophication, when phosphorus concentrations declined by 25%. Conservation measures from 2009 to 2015 partially improved the population from 2015, but pikeperch biomass did not rea...

Freshwater protected areas are designated parts of the inland waters that restrict human activities. They were created as a mechanism to combat the decline of fauna and flora of the world. Some authors have questioned their actual effectiveness in terms of the purpose of protecting endangered fauna and flora. We conducted an experiment in Lipno res...

Most lotic ecosystems have been heavily modified in recent centuries to serve human needs, for example, by building dams to form reservoirs. However, reservoirs have major impacts on freshwater ecosystem functions and severely affect rheophilic fishes. The aim of this review is to gather evidence that aside from direct habitat size reductions due t...

Anthropogenic activities continue to pose the greatest challenges to freshwater ecosystems. Therefore, long-term monitoring is essential for the management and conservation of these resources. Monitoring programs for freshwater bodies often use a range of indicators, including biological elements such as fish. Existing European standard provides a...

To examine the suitability of fish scales as potential tracers of nutrient pollution, we analysed the nitrogen and carbon stable isotope values (δ15N and δ13C) in scales of a generalist fish species, roach Rutilus rutilus, collected from 22 Czech reservoirs covering wide gradients of catchment land use and nutrient enrichment. Using generalised add...

Ligula intestinalis (Linnaeus, 1758) is a tapeworm parasite with a worldwide distribution that uses a wide variety of fish species as its second intermediate host. In the present study, we investigated the prevalence and population genetic structure of plerocercoids of L. intestinalis in five common cyprinoid species, roach Rutilus rutilus (Linnaeu...

The book contains the overview and the description of the methods for the monitoring of qualitative and quantitative composition of the fish stock of lakes and reservoirs. It gives thorough description of the fieldwork and primary processing of information collected. Template field protocols to accompany every sample are attached. Use of multi-mesh...

Gillnetting is a technique commonly used in relative abundance and biomass estimates of fish. However, due to its passive nature, the direct recalculation of the catch to reservoir volume or area is not trivial. This issue is often solved by using hydroacoustics, which provides information about fish density, though without the ability to distingui...

Internal seiches are common in stratified lakes, with significant effects on stratification patterns, hydrodynamics and vertical nutrient transport. In particular, seiches can change the vertical distribution of the thermocline and the cold hypolimnetic and warm epilimnetic water masses by several metres on a timescale of a few hours, leading to ra...

Tato metodika AOPK ČR má za cíl zefektivnit a zpřehlednit ochranu biotopu národně významných zvláště chráněných druhů v procesu územního plánování. Mezi nástroje územního plánování patří územně analytické podklady (ÚAP), které poskytují základní informace o limitech využití území. ÚAP jsou základním podkladem pro tvorbu územního plánu (ÚP). Prostř...

Internal seiches are common in stratified lakes, with significant effects on stratification patterns, hydrodynamics and vertical nutrient transport. In particular, seiche can change the vertical distribution of the thermocline and the cold hypolimnetic and warm epilimnetic water masses by several meters on a timescale of a few hours. The results ar...

Obtaining a representative sample is fundamental to the assessment of fish communities. In this study we used data from 99 different surveys of 29 artificial lakes in the Czech Republic to evaluate the precision of fish community indicator estimates based on reduced gillnet scenarios derived from triplet gillnets installed in each particular locali...

Information about fish distribution and abundance in the upper part of the water column are often fundamental for both research and management. However, this information is extremely hard to obtain using conventional hydroacoustic methods. For this reason, the mobile hydroacoustic upward-looking system (38 kHz split-beam echosounder) in combination...

Temporal and spatial heterogeneity in the distribution of cladocerans in lakes could be caused by abiotic (wind, water currents) and biotic factors (reproduction, food resources, predation). Diel horizontal and vertical distribution of cladoceran assemblages was studied in two deep lakes (Milada and Most Lakes, Czech Republic) in early (June) and l...

Fish otoliths are conservative structures that are widely used on fishery science for multiple purposes. Despite its relevance in the research field, little is known about the ontogeny and inter-population effects on the otolith of freshwater fish. In this study we used otoliths from 1800 European perch (Perca fluviatilis) individuals from 9 differ...

The higher proportion of males of the invasive round goby Neogobius melanostomus in samples from two activity selective passive fishing gears compared with one activity non‐selective fishing gear in three Dutch lakes is related to higher male locomotory activity and is a sex‐dependent trait. This difference in activity reflects the different ecolog...

We investigated the change in benthic fish communities in three artificial lakes of the Biesbosch area in the Netherlands between two time periods: before and after the invasion of round goby (Neogobius melanostomus). Native ruffe (Gymnocephalus cernua), the dominant species in benthic gillnet and littoral beach seining catches before the invasion,...

Sampling of benthic fish is complicated, especially in deep inland water bodies with a structured bottom. The catches were compared of rapidly spreading round goby (Neogobius melanostomus) using small fykes nets and benthic gillnets in three artificial lakes in The Netherlands over a two year period. Round gobies were captured at all depth layers i...

A novel sampling scheme, using a combination of electrofishing, visual exploration by scuba divers, two types of fyke nets and longlines, was tested in four reservoirs (including their inlets and outlets) to monitor a population of burbot Lota lota. This was supplemented by fry trawling and vertical hydro‐acoustics, to detect L. lota larvae in two...

Understanding spatial distribution of organisms in heterogeneous environment remains one of the chief issues in ecology. Spatial organization of freshwater fish was investigated predominantly on large-scale, neglecting important local conditions and ecological processes. However, small-scale processes are of an essential importance for individual h...

In the Czech Republic, the Balkan spiny loach Sabanejewia balcanica was historically only known from the River Bečva, a left tributary of the River Morava, itself a main tributary of the River Danube. Following its assumed extinction in the Czech Republic, a small population was found in a 1 km stretch of the River Vlára at the Slovak border, with...

Gas ebullition of river impoundments plays an increasingly significant role, particularly in transporting methane CH4 from their sediments to the atmosphere, and contributing to the global carbon budget and global warming. Quantifying stochastic and episodic nature of gas ebullition is complicated especially when conventionally conducted by using c...

For ethical reasons and animal welfare, it is becoming increasingly more important to carry out ecological surveys with a non-invasive approach. Information about fish distribution and abundance in the upper water column is often fundamental. However, this information is extremely hard to obtain using classical hydroacoustic methods. We developed a...

Ebullitive emissions of greenhouse gases have become an increasingly important gas flux from river impoundments to the atmosphere, contributing to the global carbon budget and global warming. The dynamics of gas bubbling, however, varies with spatial and temporal scales, thereby perplexing understanding and quantification of such a process. A water...

Monitoring of biota in heterogeneous ecosystems requires sampling in different habitats and across environmental gradients. The resulting multivariate community data are typically aggregated into one or several indicator values for the entire ecosystem, but the relationship between the robustness of such indicators and sampling effort, including th...

Horizontally-aligned, fixed and mobile, transducers are routinely deployed at depths of 0.5-0.75 m to survey the surface layer of waterbodies for fish. However, simulations and measurements demonstrate that a smooth surface can cause serious errors in the target strength (TS) and split-beam angular position estimates. Errors in TS up to 10 dB and d...

We explored whether fin clips and scales can be used as potential non-lethal alternatives to muscle tissue for examining the isotopic composition of asp Leuciscus aspius, a locally threatened freshwater species. Dorsal fin clips, scales and muscle plugs were collected from two asp populations and subsequently analysed for nitrogen and carbon stable...

The assessment of ecological quality in freshwater ecosystems is a key issue in many countries, but conditions for the development of assessment methodologies are often country-specific. This study proposes a simple methodology for the assessment of the ecological potential of reservoirs based on fish communities using a dataset covering major envi...

Perch (Perca fluviatilis, L.) is usually believed to spawn in a shallow water of rivers, lakes and reservoirs where majority of egg strands is deposited to a maximum depth of 2 m. We studied the depth distribution of egg strands of perch in Chabařovice Lake, Czech Republic, in spring 2007, 2008, 2009, 2010 and 2012 (Fig. 1). In total, three SCUBA...

Ecological quality assessment of non-natural water bodies is, in contrast to natural systems, less developed and requires determining biological indicators that reliably reflect environmental conditions and anthropogenic pressures. This study was motivated to propose fish indicators appropriate for assessment of reservoir ecosystems in central Euro...

This study addresses fish behaviour at the mouth of a midwater trawl in two temperate reservoirs. Fish distribution and behaviour were monitored using a SIMRAD EK60 (38. kHz) split-beam echosounder with the transducer deployed at the water surface, attached to the surface trawl headrope. We were able to describe day and night patterns of vertical d...

Fish recruitment in riverine reservoirs is not fully understood because the long-term data series required for standard stock-recruitment models are often lacking. In this study, two unrelated piscivorous species with different ecologies, asp (Leuciscus aspius) and pikeperch (Sander lucioperca), were investigated over a 14-year period in a reservoi...

Data from nine reservoirs in the Czech Republic were used to investigate density and size distribution patterns for dominant fish species of the juvenile pelagic community at night. Clear trends of increasing density along the longitudinal gradient for bream, roach, bleak, and pikeperch were observed in long (>5 km) reservoirs but were absent in sh...

The European Standard EN 14757 recommends gillnet mesh sizes that range from 5 to 55mm (knot-to-knot) for the standard monitoring of fish assemblages and suggests adding gillnets with larger mesh sizes if necessary. Our research showed that the recommended range of mesh sizes did not provide a representative picture of fish sizes for larger species...

The following information is missing from the Funding section: This study received institutional support from the Czech Academy of Sciences (RVO:60077344, http://www.avcr.cz/) and the CEKOPOT project (CZ.1.07/2.3.00/20.0204), co-financed by the European Social Fund and the state budget of the Czech Republic. Additionally, this study was supported b...

We investigated diel habitat use of fish covering the littoral and pelagic zones of the Římov Reservoir (Czech Republic) and analyzed the influence of predator presence and of shifting feeding habitats in all dominant species and age groups. Our sampling revealed distinctive diel changes of fish distribution in the reservoir, which were age- and sp...

The sampling skills of three common European fish species (Barbus barbus, Chondrostoma nasus and Squalius cephalus) were tested to assess their potential as biomonitors of past changes in river water quality through the analysis of diatoms in fish guts. The study was performed on three rivers with different chemical and physical conditions. Compari...

The effect of diel period and littoral habitats on the distribution of age-0 fish was tested in a deep-valley reservoir using boat-modified point abundance sampling by electrofishing (PASE). Day and night samplings unveiled differences in abundance of age-0 fish while recognizing most of the commonly present age-0 fish species in the littoral zone....

Large year-to-year variability in different fish species recruitment has been confirmed by previous studies while diurnal patterns of occupation in two basic reservoir habitats (pelagic and littoral) by different age-0 fish species in late summer are still unclear. Data collected over an 11-year period regarding late-summer age-0 fish assemblages i...

This paper is concerned with parameter estimation for the Neyman-Scott point process with inhomogeneous cluster centers. Inhomogeneity depends on spatial covariates. The regression parameters are estimated at the first step using a Poisson likelihood score function. Three estimation procedures (minimum contrast method based on a modified K function...

Fish avoidance behaviour in the trawl mouth at night was investigated in the extremely shallow and turbid Lake Neusiedl in Austria. To evaluate fish reactions, a fixed frame benthic trawl with three electricity modes (without electricity, with continuous electricity and with interrupted electricity) was used and the captured fish abundances, biomas...

The diel horizontal migration (DHM) of fish between the inshore and offshore zones of the Římov Reservoir (Czech Republic, deep, stratified, meso-eutrophic) was investigated by a combination of horizontal and vertical hydroacoustic surveys at 3-h intervals over 48 h and day/night purse seining in August 2007. An overwhelming majority of fish were a...

The roles of wind protected bays, presence of littoral vegetation and light attenuation in the water column on spawning site selection and depth of egg strands deposition by perch Perca fluviatilis was studied in Římov Reservoir, Czech Republic, in the years 2007 and 2011 using boat observation and SCUBA divers. The data were compared with results...

Littoral age 0+ fish were studied with respect to spatio-temporal heterogeneity in the deep-valley Římov Reservoir (Czech Republic) from June to October 2007 using point abundance sampling by electrofishing. The abundance and diversity of age 0+ fish in different types of littoral habitats were examined along the longitudinal gradient of the reserv...

The aim of this study was to test the selectivity of a trawl main body, especially for small fish, during night sampling. The tested trawl had a mesh size of 80/40/20 mm in the main body, a mouth opening of approximately 100 m2, and a length of 48 m and was originally designed for sampling vendace, Coregonus albula L. Trawl selectivity was determin...

A hydroacoustic survey and supplementary gillnet investigation were carried out in the open water of the central part of Lake Turkana in September 2009. Overall acoustic fish density and biomass were assessed as 1381 ind./ha and 30 kg/ha, respectively. The fish density estimate was lower than the results from two previous investigations in the 1970...

The distribution of egg strands of perch Perca fluviatilis and factors affecting this distribution, in terms of spawning sites and spawning depths used, was studied in spring 2010 in Chabarovice Lake, Czech Republic, using areas with an artificial spawning substrate (ASS.) and control areas outside the ASS. Perch significantly preferred a calm shor...

Inland water bodies contain extremely steep-sloped bottoms compared with those typically occurring during marine vertical surveys. These steep bottom slopes can cause high acoustic dead zones, biasing our estimates of living organisms. The studies so far have used the assumption that the first contact between the acoustic wavefront and bottom will...

The reproduction biology of perch Perca fluviatilis was studied in relation to lake hydrology, spawning substrate and female size using SCUBA divers during late April and mid-May 2009 in Chabařovice Lake, Czech Republic. An extreme displacement of water mass, induced by a long-lasting strong wind, caused the abundance of egg strands to differ signi...

Fish activity was monitored analyzing the catches of gillnets exposed for short time intervals at night. Experiments were done in two Central European reservoirs with different turbidity and fish density. Cyprinids dominated in both reservoirs. The aims of the study were to describe and model a pattern of fish activity in general and on species and...

We present a developmental study focusing on the development of coloration patterns in a subgroup of Neotropical cichlids, the subfamily Cichlasomatinae. Based on the presented coloration ontogenetic series of 40 species we show that developmental information is a necessary prerequisite for any serious attempts in understanding adult coloration pat...