Lateef Babatunde Salam

Elizade University · Biological Sciences

Mechanic workshops in residential areas are sites referenced for small-scale chronic contamination with petroleum hydrocarbons (HC) and associated pollutants like heavy metals. The main aim of this study was to isolate from a mechanic workshop soil in Lagos a novel indigenous bacterium with potential for degradation of phenanthrene, a model polyaro...

Ologe Lagoon, in Lagos State Nigeria, is one of the freshwaters exposed to chemical and hydrocarbon pollution. The impacts of anthropogenic pollution on lagoon microbial communities were assessed. Three sampling points were identified, namely Ologe industrial contaminated water (OLICW), Ologe human activity water (OLHAW), and relatively undisturbed...

The exploitation of exciting features of plastics for diverse applications has resulted in significant plastic waste generation, which negatively impacts environmental compartments, metabolic processes, and the well-being of aquatic ecosystems biota. A shotgun metagenomic approach was deployed to investigate the microbial consortia, degradation pat...

Bacterial community of a diesel-spiked agricultural soil was monitored over a 42-day period using the metagenomic approach in order to gain insight into key phylotypes impacted by diesel contamination and be able to predict end point of bioattenuation. Soil physico-chemical parameters showed significant differences (P < 0.05) between the Polluted S...

Environmental compartments polluted with animal charcoal from the skin and hide cottage industries are rich in toxic heavy metals and diverse hydrocarbon classes, some of which are carcinogenic, mutagenic, and genotoxic, and thus require a bio-based eco-benign decommission strategies. A shotgun metagenomic approach was used to decipher the microbio...

The impacts of hexavalent chromium (Cr) contamination on the microbiome, soil physicochemistry, and heavy metal resistome of a tropical agricultural soil were evaluated for 6 weeks in field-moist microcosms consisting of a Cr-inundated agricultural soil (SL9) and an untreated control (SL7). The physicochemistry of the two microcosms revealed a dimi...

Aeromicrobiology provides a detailed and systematic analysis of the microbial communities and toxins collectively called bioaerosols that can be found in air. It provides information on the basics of Aeromicrobiology, the fate and transport of microorganisms in air, and the fundamental differences between intramural and extramural Aeromicrobiology....

This chapter explores the various physical and chemical methods employed in the control of bioaerosols in the microbiological and biomedical laboratory. The basic scientific principles behind the various methods and the techniques are given due consideration. The central role of proper control measures is emphasized as an important part of routine...

This chapter gives detailed explanation on the various methods used to analyze bioaerosol samples. It starts by explaining the importance of selecting a good sampling technique for effective and useful downstream analysis. It then explains various culture-based and culture-independent analytical methods for bioaerosols, highlighting their strengths...

In hydrocarbon-impacted matrices, accessibility to iron, an essential micronutrient poses a significant challenge to microorganisms due to its complexation with hydrocarbon pollutants. This necessitates the elicitation of diverse adaptive responses to counteract the iron stress and achieve cellular iron homeostasis. In this study, putative genes re...

Environmental microorganisms usually exhibit a high level of genomic plasticity and metabolic versatility that allow them to be well-adapted to diverse environmental challenges. This study used shotgun metagenomics to decipher the functional and metabolic attributes of an uncultured Paracoccus recovered from a polluted soil metagenome and determine...

Background Cytochrome P450 monooxygenases (CYPs) are exciting biocatalysts that catalyzes diverse regio- and stereoselective reactions of a broad range of substrates. The cytochrome P450 genes (CYPomes) of a chronically polluted soil (3S) with history of agricultural activities were deciphered via functional annotation of putative ORFs (open readin...

Persistent use of pesticides and animal manure in agricultural soils inadvertently introduced heavy metals and antibiotic/antibiotic resistance genes (ARGs) into the soil with deleterious consequences. The microbiome and heavy metal and antibiotic resistome of a pesticide and animal manure inundated agricultural soil (SL6) obtained from a vegetable...

The hunt for microbially-synthesized secondary metabolites have long generate exceptional interest due to their unique functionalities. In this study, shotgun metagenomic was used to decipher the array of secondary metabolites present in a contaminated agricultural soil (AB1) via detection of their biosynthetic genes. Functional annotation of AB1 m...

Profiling of hydrocarbon-contaminated soils for antibiotic resistance genes (ARGs) is becoming increasingly important due to emerging realities of their preponderance in hydrocarbon-inundated matrices. In this study, the antibiotic resistome of an agricultural soil (1S) and agricultural soil contaminated with spent engine oil (AB1) were evaluated v...

Animal charcoal from skin and hides cottage industries indiscriminately disposed in run offs and drainage channels harbors hazardous constituents that are mutagenic and toxic, and thus require bio-based eco-friendly depuration strategies. A microbial consortium (FN7) from an animal charcoal polluted site enriched with acenaphthene was structurally...

Background Soils polluted with animal charcoal from skin and hide cottage industries harbour extremely toxic and carcinogenic hydrocarbon pollutants and thus require a bio-based eco-friendly strategy for their depuration. The effects of carbon-free mineral medium (CFMM) amendment on hydrocarbon degradation and microbial community structure and func...

The effects of carbon-free mineral medium (CFMM) amendment on hydrocarbon degradation and microbial community structure and function in an animal charcoal polluted soil was monitored for six weeks in field moist microcosms consisting of CFMM treated soil (FN4) and an untreated control (FN1). Gas chromatographic analysis of hydrocarbon fractions rev...

The antibiotic and heavy metal resistome of a chronically polluted soil (3S) obtained from an automobile workshop in Ilorin, Kwara State, Nigeria was deciphered via functional annotation of putative ORFs (open reading frames). Functional annotation of antibiotic and heavy metal resistance genes in 3S metagenome was conducted using the Comprehensive...

The effects of cadmium (Cd) contamination on the microbial community structure, soil physicochemistry and heavy metal resistome of a tropical agricultural soil were evaluated in field-moist soil microcosms. A Cd-contaminated agricultural soil (SL5) and an untreated control (SL4) were compared over a period of 5 weeks. Analysis of the physico-chemic...

BACKGROUND The purpose of this study is to use shotgun next-generation sequencing to unravel the microbial community structure of an agricultural soil, decipher the effects of mercury contamination on the structure of the microbial community and the soil physicochemistry and heavy metals content. RESULTS The soil physicochemistry after mercury con...

This chapter gives a detailed explanation on the use of metagenomics to elucidate the diversity and functions of microbial assemblages in freshwater lakes. Starting with a historical overview on the role of microscopy and culture in the evolution of the field of microbiology and assessment of microbial community of environmental samples, it goes on...

Crude oil contamination of soil matrices is a persistent problem with deleterious consequences due to the recalcitrant, toxic and mutagenic properties of its constituents. To decipher the effects of crude oil contamination on the microbial community structure and function of an agricultural soil, field moist soil microcosms 2S (agricultural soil) a...

Understanding the intricate link between the soil microbiota and their metabolic functions is important for agricultural and ecological processes and could be used as a biomarker of soil health. To understand the relationship between soil microbial community structure and functions, a soil microcosm designated 2S (agricultural soil) was set up. Met...

The effects of corn steep liquor (CSL) on hydrocarbon degradation and microbial community structure and function was evaluated in field-moist soil microcosms. Chronically polluted soil treated with CSL (AB4) and an untreated control (3S) was compared over a period of 6 weeks. Gas chromatographic fingerprints of residual hydrocarbons revealed remova...

Abstract Background: The purpose of this study is to decipher the diverse carbohydrate metabolism pathways in a spent engine oil-perturbed agricultural soil, enunciate the carbohydrate-active enzymes and genes involved in the process, taxonomically classify the annotated enzymes and genes, and highlight the importance of the study for ecological an...

Introduction: Poultry manure and cow dung have been established as potential material for the bioremediation of petroleum polluted sites, with emphasis on nutrient addition. Aim: Our aim was to isolate from poultry droppings and cow dung bacteria with ability to degrade petroleum hydrocarbons. Materials and Methods: Bacteria were isolated from poul...

Indiscriminate disposal of animal charcoal from skin and hides cottage industries often impact the environments with toxic hydrocarbon components and thus require eco-friendly remedial strategies. A bacterial strain isolated from a site polluted with animal charcoal was characterized, identified as Proteus mirabilis 10c, and studied for ability to...

A bacterium isolated an asphalt plant soil and identified as a strain of Bacillus lentus was tested in vitro and in sterilized and native soils for ability to survive and sustain pyrene degradation over a period of 63 days. The exponential growth rate in vitro was 0.049 d-1 and the doubling time 2.65 d. In the control flask without pyrene organism...

The last two decades had witnessed extensive investigation on bacterial degradation of carbazole, an N-heterocyclic aromatic hydrocarbon. Specifically, previous studies have reported the primary importance of angular dioxygenation, a novel type of oxygenation reaction, which facilitates mineralization of carbazole to intermediates of the TCA cycle....

Bacterial community structure in a hydrocarbon-contaminated Mechanical Engineering Workshop (MWO) soil was deciphered using 16S rRNA gene clone library analysis. Four hundred and thirty seven clones cutting across thirteen bacterial phyla were recovered from the soil. The representative bacterial phyla identified from MWO soil are Proteobacteria, B...

Analyzing the microbial community structure and functions become imperative for ecological processes. To understand the impact of spent engine oil (SEO) contamination on microbial community structure of an agricultural soil, soil microcosms designated 1S (agricultural soil) and AB1 (agricultural soil polluted with SEO) were set up. Metagenomic DNA...

A novel pyrene-degrading actinomycete, phylogenetically identified as Microbacterium esteraromaticum strain SL9 was isolated from a polluted hydrocarbon-contaminated soil in Lagos, Nigeria. Growth of the isolate on pyrene was assayed using total viable counts, pyrene degradation was monitored using gas chromatography (GC-FID) while UV-Vis spectroph...

Two bacterial strains phylogenetically identified as Pseudomonas aeruginosa strains RM1 and SK1 displayed extensive degradation ability on waste engine oil (SAE 40W) in batch cultures. Spectrophotometric analysis revealed the presence of various heavy metals such as lead, chromium and nickel in the waste engine oil. The rate of degradation of waste...

An acenaphthene-degrading bacterium putatively identified as Pseudomonas sp. strain KR3 and isolated from diesel-contaminated soil in Lagos, Nigeria was investigated for its degradative and biosurfactant production potentials on crude oil. Physicochemical analysis of the sampling site indicates gross pollution of the soil with high hydrocarbon cont...

In a previous study, three bacterial strains isolated from tropical hydrocarbon-contaminated soils and phylogenetically identified as Achromobacter sp. strain SL1, Pseudomonas sp. strain SL4 and Microbacterium esteraromaticum strain SL6 displayed angular dioxygenation and mineralization of carbazole in batch cultures. In this study, the ability of...

The efficiency of corn steep liquor (CSL) as a potential stimulant for remediation of hydrocarbon-contaminated soil was evaluated in soil microcosms. Chronically polluted soil samples treated with CSL, water, and un untreated control were compared over a period of 42 days. There were remarkable changes in the physicochemical status of the soil in t...

A Gram-negative facultatively methylotrophic bacterium putatively identified as Methylobacterium mesophilicum strain RD1 displayed extensive degradative ability on used engine oil (SAE 40W) in liquid cultures. The rate of degradation of used engine oil (1274.85 mg L?1) by the isolate, for the first 12 days and the last 9 days were 65 and 40 mg L?1...

Four bacterial strains isolated from hydrocarbon-contaminated soils in Lagos, Nigeria, displayed extensive degradation abilities on carbazole, an N-heterocyclic aromatic hydrocarbon. Physicochemical analyses of the sampling sites (ACPP, MWO, NESU) indicate gross pollution of the soils with a high hydrocarbon content (157,067.9 mg/kg) and presence o...

Two fluorene-degrading Gram-positive Bacillus strains, putatively identified as Bacillus subtilis BM1 and Bacillus amyloliquefaciens BR1 were isolated from hydrocarbon-and asphalt-contaminated soils in Lagos, Nigeria. The polluted soils have a relatively high total hydrocarbon content (16888.9 and 9923.1 mg/kg, respectively), very low concentration...

A novel anthracene-degrading Gram-positive actinomycete, Microbacterium sp. strain SL10 was isolated from a hydrocarbon-contaminated soil at a mechanical engineering workshop in Lagos, Nigeria. The polluted soil had an unusually high total hydrocarbon content of 157 g/kg and presence of various heavy metals. The isolate tolerated salt concentration...

Two hydrocarbon degraders isolated from an abandoned coal power plant soil in Lagos, Nigeria, were tested. The isolates were identified as belonging to the genus Pseudomonas. P. putida G1 exhibited strong degradative ability on crude oil, kerosene, fair ability on engine oil, brake oil and petrol and a weak ability on pyrene, while P. aeruginosa K1...

Two hydrocarbon degrading Gram-negative bacteria isolated from hydrocarbon polluted power plant soil in Lagos, Nigeria, were studied for their degradation potentials on weathered crude oil (Escravos Blend). These bacteria isolates were identified as Enterobacter cloacae strain LG1 and Burkholderia cepacia strain LG2. The highest population density...

Polycyclic aromatic compounds are a group of highly recalcitrant organic pollutants. The initial steps in the degradation of polycyclic aromatic hydrocarbon (PAHs) involve the dihydroxylation of the aromatic ring, a step catalysed by dioxygenase enzymes. The degradation of many xenobiotic and hydrocarbon compounds is known to be mediated by plasmid...