Kelsey Vitense

United States Environmental Protection Agency | US EPA · Office of Research and Development

QSAR models for predicting pesticide toxicity to fish are evaluated. A new QSAR model based on Office of Pesticide Programs fish acute toxicity data is developed and compared to existing models.

Lake morphometry is a driver of limnological processes, yet digitized bathymetry is lacking for most lakes. Here, we describe a method for efficiently extracting hypsography from bathymetric maps using ImageJ. To validate our method, we compared results generated from two independent users to those obtained from digital elevation models for 100 lak...

The United States Environmental Protection Agency's Endocrine Disruptor Screening Program (EDSP) is tasked with assessing chemicals for their potential to perturb endocrine pathways, including those controlled by androgen receptor (AR). To address challenges associated with traditional testing strategies, EDSP is considering in vitro high-throughpu...

Lake water clarity is an indicator of water quality, trophic status, and habitat condition. Changes in clarity impact lake ecosystems and may reflect land use changes or presence of invasive species. Quantifying temporal changes in water clarity can be challenging because clarity varies seasonally, annually, and spatially within and among lakes. We...

Anthropogenic activities introduce complex mixtures into aquatic environments, necessitating mixture toxicity evaluation during risk assessment. There are many alternative approaches that can be used to complement traditional techniques for mixture assessment. This study aimed to demonstrate how these approaches could be employed for mixture evalua...

Walleye (Sander vitreus) are an ecologically important species managed for recreational, tribal, and commercial harvest. Walleye prefer cool water and low light conditions, and therefore changing water temperature and clarity potentially impacts walleye habitat and populations across the landscape. Using survey data collected from 1993 to 2018 from...

Watersheds are subjected to diverse anthropogenic inputs, exposing aquatic biota to a wide range of chemicals. Detection of multiple, different chemicals can challenge natural resource managers who often have to determine where to allocate potentially limited resources. Here we describe a weight‐of‐evidence framework for retrospectively prioritizin...

Concentrations at which global gene expression profiles in cells or animals exposed to a test substance start to differ significantly from those of controls have been proposed as an alternative point of departure for use in screening level hazard assessment. The present study describes pilot testing of a high throughput compatible transcriptomics a...

Managing ecological systems for resilience can increase their capacity to maintain key functions even under global change. Oxygenated coldwater (oxythermal) habitat in lakes is an important ecological resource that is threatened by both climate change and eutrophication. Here, we quantify the resilience of oxythermal habitat in over 10,000 glacial...

Successful conservation of ecosystems exhibiting alternative stable states requires tools to accurately classify states and quantify state transition risk. Methods that utilize early warning signals are promising approaches for helping managers anticipate impending state transitions, but they require high‐resolution temporal or spatial data for ind...

Ecological data often violate common assumptions of traditional parametric statistics (e.g., that residuals are Normally distributed, have constant variance, and cases are independent). Modern statistical methods are well equipped to handle these complications, but they can be challenging for non-statisticians to understand and implement. Rather th...

Mohammadi (2019) claimed that Vitense et al. (2019) did not adequately report random forest parameter values, listing several parameters from the Python library scikit-learn as examples. Here, I explain that these parameters either were reported in the original paper or are not relevant for the software (RF++) and approach we employed. I further em...

Scientific progress depends upon the accumulation of empirical knowledge via reproducible methodology. Although reproducibility is a main tenet of the scientific method, recent studies have highlighted widespread failures in adherence to this ideal. The goal of this study was to gauge the level of computational reproducibility, or the ability to ob...

Total phosphorus (TP) is commonly used to assess water quality in shallow lakes and other surface waters. Shallow lakes require special consideration because they can transition between two alternative stable states: (1) a clear-water state that typically supports abundant submerged vegetation and provides high quality wildlife habitat, and (2) a t...

Ecosystems sometimes undergo dramatic shifts between contrasting regimes. Shallow lakes, for instance, can transition between two alternative stable states: a clear state dominated by submerged aquatic vegetation and a turbid state dominated by phytoplankton. Theoretical models suggest that critical nutrient thresholds differentiate three lake type...

Population cycling is a widespread phenomenon, observed across a multitude of taxa in both laboratory and natural conditions. Historically, the theory associated with population cycles was tightly linked to pairwise consumer-resource interactions and studied via deterministic models, but current empirical and theoretical research reveals a much ric...

Certain herbivores and their predators undergo high amplitude periodic fluctuations in abundance in northern latitudes but exhibit damped cyclic dynamics in their respective southern ranges. Generalist predators and habitat disturbance have been identified as two features of southern habitats that may contribute to the attenuation of cycles in sout...