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Extinction debt in naturally contracting mountain meadows in the Pacific Northwest, USA: Varying responses of plants and feeding guilds of nocturnal moths

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Fire suppression and climate change are leading to habitat fragmentation in temperate montane meadows across the globe, raising concerns about biodiversity loss. Restoration strategies may depend on the rate and nature of species response to habitat loss. We examined the effects of habitat loss and fragmentation on plants and nocturnal moths in natural montane meadows in the western Cascades, Oregon, USA, using generalized additive mixed models, non-metric multidimensional scaling, and multiple response permutation procedure. Historic (1949) rather than current (2005) meadow size explained species richness of herbaceous plants and herb-feeding moths and meadow plant community structure, indicating that loss of meadow species may be delayed by many decades following loss of meadow habitat, resulting in an extinction debt. In contrast, abundance of herb-feeding moths and species richness and abundance of woody plant-feeding moths were related to recent meadow configuration: as meadows are invaded by woody plants, abundance of meadow species declines, and woody plants and associated moths increase. Despite decades of fire suppression and climate change, montane meadows in many temperate mountain landscapes may still be amenable to restoration.
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ORIGINAL PAPER
Extinction debt in naturally contracting mountain
meadows in the Pacific Northwest, USA: varying
responses of plants and feeding guilds of nocturnal moths
Steven A. Highland Julia A. Jones
Received: 22 January 2014 / Revised: 22 May 2014 / Accepted: 28 May 2014 /
Published online: 7 June 2014
ÓSpringer Science+Business Media Dordrecht 2014
Abstract Fire suppression and climate change are leading to habitat fragmentation in
temperate montane meadows across the globe, raising concerns about biodiversity loss.
Restoration strategies may depend on the rate and nature of species response to habitat
loss. We examined the effects of habitat loss and fragmentation on plants and nocturnal
moths in natural montane meadows in the western Cascades, Oregon, USA, using gen-
eralized additive mixed models, non-metric multidimensional scaling, and multiple
response permutation procedure. Historic (1949) rather than current (2005) meadow size
explained species richness of herbaceous plants and herb-feeding moths and meadow plant
community structure, indicating that loss of meadow species may be delayed by many
decades following loss of meadow habitat, resulting in an extinction debt. In contrast,
abundance of herb-feeding moths and species richness and abundance of woody plant-
feeding moths were related to recent meadow configuration: as meadows are invaded by
woody plants, abundance of meadow species declines, and woody plants and associated
moths increase. Despite decades of fire suppression and climate change, montane meadows
in many temperate mountain landscapes may still be amenable to restoration.
Keywords Extinction debt Meadow-dependent species Montane meadows
Conservation Biodiversity Nocturnal moths
Communicated by Peter J. T. White.
S. A. Highland (&)J. A. Jones
College of Earth, Ocean and Atmospheric Sciences, Oregon State University, 104 CEOAS
Administration Building, Corvallis, OR 97330, USA
e-mail: highlans@geo.oregonstate.edu
J. A. Jones
e-mail: jonesj@geo.oregonstate.edu
123
Biodivers Conserv (2014) 23:2529–2544
DOI 10.1007/s10531-014-0737-z
Introduction
Habitat loss and fragmentation are primary drivers of global loss of biodiversity (Fahrig
2003; Tilman et al. 2001). After habitat loss, populations in remnants may survive for some
time before local extinction occurs (Brooks et al. 1999; Hanski and Ovaskainen 2002;
Lindborg and Eriksson 2004; Helm et al. 2006; Vellend et al. 2006; Krauss et al. 2010).
This lag, or ‘extinction debt’ (Tilman et al. 1994; Kuussaari et al. 2009) poses major
challenges and opportunities for biodiversity conservation. Extinction debt refers to the
number of extant specialist species of a habitat expected to become extinct as the com-
munity approaches a new equilibrium after a disturbance (Kuussaari et al. 2009). While
extinction debt assumes that equilibrium was present prior to disturbance, proving equi-
librium in an historic landscape is difficult and typically assumed, not proven, if mentioned
at all (e.g. O
¨ckinger et al. 2010; Bommarco et al. 2014). However, while some groups of
species experience extinction debt, other species may be favored by changes in the
landscape.
Extinction debt has been documented in human-generated and -maintained (agricul-
tural, managed pasture, and urban) landscapes in Europe that begin to undergo natural
succession, once they are no longer actively managed by humans for agricultural or other
purposes (Helm et al. 2006; Lindborg 2007; Sang et al. 2010; Polus et al. 2007; Sitzia and
Trentanovi 2011). However, it is unclear how extinction debt might be expressed in natural
habitats that were not originally created by humans and are undergoing fragmentation from
natural processes, such as forest succession and tree invasion. Habitat, here, refers to
vegetation communities identifiable from aerial photographs that potentially contain spe-
cific species of plants that can serve as host-plants to specific moth species. Montane
meadows are common in western North America and have dramatically reduced in size
and fragmented over the past century due to tree invasion. Therefore, in these meadows,
woody plants are colonizers while herbaceous plants and grasses are persisting and,
potentially, being driven locally extinct. While the extent of management and manipulation
of these meadows by native peoples is unknown, fire suppression, climate change, or
cessation of short-term grazing may contribute to meadow contraction (Miller and Halpern
1998). Meadow contraction provides an opportunity to seek evidence of extinction debt in
plant and insect species that occur in natural, largely unmanaged landscapes. Also,
extinction debt studies typically avoid landscapes with multiple fragments in close prox-
imity (O
¨ckinger et al. 2010) and fragmenting and contracting montane meadows provide a
case study for this type of landscape. Additionally, montane meadows represent islands of
open habitats in otherwise forested mountains that contain unique assemblages of organ-
isms, including plants that do not persist under forested conditions and require open, non-
forested areas to survive (Haugo and Halpern 2007). Many of these plants serve as host-
plants to moth species and contribute greatly to the overall biodiversity of mountain
landscapes in the western US. Thus, understanding the rates of species loss in these
habitats is critical for biodiversity conservation.
Vulnerability to extinction debt varies according to life history and trophic relation-
ships. Long-lived species may experience delayed extinction as individuals die off and are
not fully replaced (Helm et al. 2006; Lindborg 2007; Vellend et al. 2006). In contrast,
short-lived species such as butterflies provide mixed evidence for delayed extinction
(Krauss et al. 2010;O
¨ckinger et al. 2010; Sang et al. 2010), perhaps due to differences in
tolerance to reductions in host-plants by generalists and specialists, or due to differences in
dispersal abilities. Nocturnal moths, which are very diverse and closely tied to key food
plants, offer an ideal study organism for testing the effects of meadow loss and
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fragmentation on extinction of plants and moths that depend on those plants. Most of the
moths in this study have smaller wing lengths than butterflies and, therefore, smaller
dispersal distances (Nieminen 1996; Hamba
¨ck et al. 2007;O
¨ckinger et al. 2010). Wingspan
and body size in nocturnal moths have been shown to affect species responses to frag-
mentation and habitat isolation and loss, with smaller wingspans and thinner bodies
indicating a higher sensitivity to local fragmentation, isolation, and habitat loss (Nieminen
1996; Hamba
¨ck et al. 2007;O
¨ckinger et al. 2010). Therefore, if moths are responding to
general changes in the size of their habitat overall without regard to the maintenance of
specific plants, they should reach equilibrium fairly quickly and not show evidence of
extinction debt. On the other hand, if moths are responding to changes in food plant
distribution, they should reach equilibrium more slowly and show evidence of extinction
debt if their food plants also show evidence of extinction debt. Feeding guilds of nocturnal
moths, including herbaceous and woody plant feeders also may respond differently to
changes in the landscape.
In this study, we examined how herbaceous plants, nocturnal macromoths that feed on
herbaceous plants, and woody-plant feeding macromoths are related to landscape config-
uration in naturally contracting mountain meadows in the western Cascade Range of
Oregon. These changes are thought to have begun contracting due to changes in landscape
management associated with the arrival of Euro-American culture and exploration,
including fire suppression, grazing, and cessation of Native American foraging and man-
agement (Miller and Halpern 1998; Highland 2011). Prior to these changes in landscape
management, these meadows are assumed to have been stable and at equilibrium for at
least a few 100 years. We hypothesized that
1. species richness of plants in montane meadows, and species richness and abundance of
moths that feed on those meadow plants, would be more closely related to past than to
present meadow configuration
2. species richness and abundance of moths dependent on woody plants would be related
to the present configuration of woody plants.
We interpreted relationships with past meadow configuration as evidence for extinction
debt following Kuussaari et al. (2009) and considered the implications for biodiversity
conservation.
Materials and methods
Study area
This study was based on vegetation and moth data collected during the summer and fall of
2008, 2009, and 2010 on the high eastern ridge of the HJ Andrews Experimental Forest and
Long Term Ecological Research (LTER) site (hereafter Andrews Forest) within the Wil-
lamette National Forest, Lane County, OR, USA (Fig. 1). Approximately 95 % of the
Andrews Forest is forested, and meadows occupy slightly \5 % of area, along high ele-
vation ridgetops. Plant communities below 1,000 m elevation are dominated by an over-
story of Douglas-fir (Pseudotsuga menziesii) and western hemlock (Tsuga heterophylla)
that create a canopy 60–80 m high. Plant communities above 1,000 m consist of a mix of
subalpine forests, shrub fields, and montane meadows. Subalpine forests are dominated by
an overstory of 50–70 m Pacific Silver fir (Abies amabilis) and noble fir (Abies procera)
with an understory of various woody-angiosperm trees and shrubs such as huckleberry
Biodivers Conserv (2014) 23:2529–2544 2531
123
(Vaccinium spp.) and ocean spray (Holodiscus discolor). Open montane ridgetop meadows
are dominated by herbaceous plants and grasses, such as lupines (Lupinus spp.) and fescues
(Festuca spp.). The meadows originated prior to Euro-American settlement and have been
undisturbed, apart from sheep grazing for a few decades in the late nineteenth and early
twentieth century (Miller and Halpern 1998; Takaoka and Swanson 2008). Similar
meadows occur on the high ridges of the western Cascades throughout the Pacific
Northwest (Franklin and Dyrness 1988).
Meadow metrics
All meadows (non-forest, non-shrub vegetation) larger than 0.01 ha were mapped using
aerial photographs from 1949 to 2005. A 2005 one-meter resolution image of Lane County,
OR from the National Agricultural Imagery Program (NAIP) was used as the basis for
digitizing the 2005 meadow layer. Aerial photographs from 1949 (black and white,
1:20,000) were acquired and scanned at the U.S. Forest Service Pacific Northwest
Research Station, then georectified using permanent or semi-permanent landscape markers.
The perimeter and area of each meadow in 1949 and 2005 were digitized, excluding all
identifiable trees and tree clusters in meadows. Elevation, aspect, and slope were calculated
for each meadow using a 10-m digital elevation model (DEM). The change in area and
perimeter of each meadow from 1949 to 2005 was determined. Distances from the edges of
each meadow to the nearest neighboring meadow and nearest road were calculated.
Meadows were grouped into five ‘meadow complexes’’: spatial clusters containing
Fig. 1 Overview of the HJ Andrews Experimental Forest, location of the meadows, shape and
configuration of meadows in 1949 and 2005, and location of the five meadow complexes
2532 Biodivers Conserv (2014) 23:2529–2544
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meadow fragments ranging in size and isolation that formed intuitive landscape groupings
(Fig. 1). The total meadow area within each complex was calculated. Spatial data analysis
was conducted using ArcGIS 9.3.
Vegetation sampling
Vegetation was sampled in the summer of 2008 at fifteen meadows and two low density
forests in saddles adjacent to meadows. Three plots were located in each of the five
meadow complexes: one each in the largest meadow, a medium or small fragment of a
formerly large meadow (in 1949), and a medium or small meadow that was isolated in
1949. Sampled meadows ranged in size from 0.4 to 10.7 ha in 1949 and from 0.2 to 4.7 ha
in 2005. A modified-Whittaker plot [a 20 950 m
2
plot within which are nested one central
5920 m
2
subplot, two corner 2 95m
2
subplots, and ten 0.5 92m
2
subplots distributed
around the inside edge of the large plot (Stohlgren et al. 1995)] was sampled in each
meadow. This nested vegetation plot design is appropriate for studies of biological
diversity because it captures more species of plants in a smaller amount of time than many
other techniques (Stohlgren et al. 1995). Percent cover of all plant species was recorded in
each nested subplot. The remaining portion of the full plot was examined for plant species
not identified in the subplots. Total percent cover by species and total richness for all
subplots were used in statistical analyses. Most sampled plots in meadows were within
50 m of a forest edge, from 10 to 920 m from roads, and 25 to 288 m from the nearest
neighboring meadow. All plants were identified to species and identified as perennial or
annual following Hitchcock and Cronquist (1973). Plants were defined as ‘‘meadow spe-
cialists’ if they required open, non-forested habitats to survive, using habitat descriptions
provided by Hitchcock and Cronquist (1973) and the USDA Plants Database (http://plants.
usda.gov/).
Moth sampling
Moth sampling utilized a stratified systematic design with trap locations stratified by
vegetation type and meadow size (0.5–4.7 ha), and sampling was distributed uniformly
over the summers (July to September) of 2008, 2009, and 2010 (Fig. 5in Appendix). Of
the total of 98 moth traps, 65 were in meadows and 33 were in other vegetation types
(forests, clearcuts, and roads at high-elevation sites), and 44, 43, and 11 traps were sampled
in 2008, 2009, and 2010, respectively. Moths were collected using UV light traps. Each
trap consisted of a 5-gallon bucket on which is mounted a circular ultraviolet blacklight
and which contained an insecticide-impregnated strip (Bioquip model #2851 trap Rancho
Dominguez CA, USA). Moth traps were placed in a given location for a single night
(excluding periods of near full moon) and collected the following day. Moth abundance
refers to the number of individuals caught in a single trap in a single night, or the total
number of individuals in any aggregated assemblage of trapping events. All moths were
identified to species when possible and genus level otherwise, following Miller and
Hammond (2000,2003,2007). Host plants for moths, if known, were based on Miller
(1995), who captured caterpillars in the field and successfully reared them to adulthood
using the vegetation on which they were found, or further work documented in Miller and
Hammond (2000,2003,2007). Using host plant information, each moth species was
assigned to a feeding guild following Miller and Hammond (2000,2003,2007): herb-
feeders, woody-angiosperm-feeders, or gymnosperm-feeders. ‘Herb-feeders’’ eat herba-
ceous plants and grasses, ‘woody-angiosperm-feeders’’ eat parts of angiosperm shrubs and
Biodivers Conserv (2014) 23:2529–2544 2533
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trees, and ‘gymnosperm-feeders’ eat parts of coniferous trees, during the caterpillar stage.
Herb-feeders are ‘meadow specialists’’ in this landscape because non-meadow vegetation
types contain few herbaceous plants. Very few moths in this system belong to multiple
feeding guilds, and few species are specialists on individual plant species (Miller and
Hammond 2000,2003,2007). Instead, most moth species appear to be somewhat flexible
within their feeding guild in that gymnosperm-feeders can likely feed on multiple species
of gymnosperm trees and grass-feeders can likely feed on multiple grass species. There-
fore, our attribution of feeding guilds to different moth species is reliable, even if all host
plants for a given moth species are not known.
Statistical analysis
Data were analyzed using three statistical techniques: (1) generalized additive mixed
models (GAMMs), (2) rank-transformed multi-response permutation procedure (MRPP),
and (3) non-metric multidimensional scaling ordination (NMDS). PC-ORD version 5.31
was used for the MRPP and NMDS analyses (McCune and Mefford 2006).
Generalized additive mixed models using the Poisson distribution family and log link
function tested the relationship between contemporary vegetation and plant richness, moth
richness and moth abundance (response variables) and the spatial distribution of meadows,
forest, and roads in 1949 and 2005 (predictor variables), using meadow complex as a
random variable. Response variables included plant species richness (total and meadow
specialist perennial), species richness of the three moth feeding guilds, and species
abundances of the three moth feeding guilds. Predictor variables included meadow area
and perimeter in 1949 and 2005; forest area increase (new forest) 1949–2005; 1949
meadow complex area; 2005 meadow complex area; 2005 fragment area (total area of
meadow fragments that had been one meadow in 1949); distance from sample location to
the nearest forest (in 1949 and 2005), road, and next meadow; calendar day of sample; and
meadow complex association. GAMM models were run for all combinations of predictor
and response variables using un-biased risk estimator criterion (UBRE) scores to assess
variable inclusion in the larger models, considered the preferred method when using the
Poisson distribution family (Wood 2006,2011). For the plants, models were run with
meadow area and perimeter in 1949 and 2005; forest area increase (new forest)
1949–2005; 1949 meadow complex area; 2005 meadow complex area; 2005 fragment area
individually to identify the one with the lowest UBRE score, lowest pvalue, highest
adjusted R
2
, and highest deviance-explained. Then, the three distance variables (to road,
nearest meadow, or forest) were added to the best model and the distance variable that
provided the greatest model improvement was included in the final model. For the moths,
models were run with calendar day as the first variable, to account for the high degree of
seasonality in the moth data, then each meadow measurement individually to identify the
one with the lowest UBRE score, lowest significant pvalue (\0.05), highest adjusted R
2
,
and highest deviance-explained. A second set of models were run using only the 65
samples taken in meadows to test whether including forest samples altered the results.
Moths in this region have a dramatic increase, peak, and decrease in richness and abun-
dance from spring through fall (Highland et al. 2013; Fig. 6in Appendix), and the data
used here followed the same trend. GAMM analyses were conducted using the mgvc
package in R (R Development Core Team 2013; Wood 2011). Plants and moths were
determined to have experienced extinction debt if their contemporary richness or abun-
dance values were better explained by 1949 landscape metrics than 2005 landscape
2534 Biodivers Conserv (2014) 23:2529–2544
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metrics, following the methods established by multiple prior extinction debt studies
(Kuussaari et al. 2009; Lindborg and Eriksson 2004).
Multi-response permutation procedure is a nonparametric procedure for testing the
hypothesis of no difference between two or more groups (McCune and Grace 2002; Mielke
1984; Mielke and Berry 2001). Results of MRPP are evaluated based on a pvalue and an
A-statistic. The A value is a chance-corrected within-group agreement that measures the
effect size, with a value of 0.1 indicating moderate effect and a value of over 0.2 indicating
a moderate to high effect (McCune and Grace 2002). This analysis was designed to
supplement and support the NMDS analysis to test for evidence of extinction debt in the
community structure, not just richness and abundance, of plants and moths. For plants,
MRPP was used to test whether a priori habitat size groups based on 1949 meadow area or
based on 2005 meadow area better explained plant community structure. Moth community
structure was not analyzed using MRPP due to the high degree of stress in the moth
community data. MRPP was conducted using PC-ORD version 6.
Non-metric multidimensional scaling ordination was used to describe plant community
structure and to identify correlated environmental variables in montane meadows. The
NMDS followed procedures recommended by Kruskal (1964) and McCune and Grace
(2002). Plant abundance data (percent cover) were arcsine square root transformed. NMDS
was conducted separately for herb-, woody-angiosperm-, and gymnosperm-feeder groups
of moths. Moth abundance data was transformed using Beal’s Smoothing (McCune 1994).
Moth community structure was not analyzed due to high stress in the data.
Results
Meadow contraction
Montane meadows in the study site contracted by more than 45 % from 1949 to 2005
(145.8 to 79.8 ha). Meadow size ranged from 0.05 to 10.7 ha in 1949 and 0.04 to 4.7 ha in
2005. From 1949 to 2005, large meadows became fragmented by tree invasion, and small
meadows disappeared, resulting in an overall decrease from 419 patches in 1949 to 261
meadow patches in 2005 (Highland 2011).
Plant richness
A total of 148 plant species, including herbaceous plants, woody-angiosperm shrubs, and
coniferous trees, was recorded in the 17 0.1-ha sample plots distributed throughout the five
meadow complexes. A few species dominated cover in most plots, and most species were
rare and had low (\5 %) cover. Meadow specialists—herbaceous plants that require open,
non-forested conditions—represented two thirds (99 species) of species recorded, includ-
ing 66 perennial herb and 33 annual species. An average of 35 plant species (range 21–49),
25 meadow specialists (range 9–44), and 20 specialist perennials (range 8–30) occurred in
the plots.
Meadow area in 1949 and distance to road or distance to nearest meadow explained
most variation in plant species richness, and meadow area in 1949 explained more variance
and deviance than any other predictor variable (Table 1). Although meadow area in 2005
was also a significant predictor variable, models including meadow area in 2005 explained
less variance and deviance, had higher UBRE scores and higher (less significant) pvalues
than those including meadow area in 1949. Distance to road was the second most
Biodivers Conserv (2014) 23:2529–2544 2535
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significant variable after 1949 meadow area in the best-fit model for all plant species (trees,
shrubs, and herbaceous plants). Distance to nearest meadow was the second most signif-
icant variable after 1949 meadow area in the best-fit model for meadow specialist
perennials.
Plant species richness was nonlinearly related to meadow area. Total richness dropped
at a faster rate than the mean response in meadows of 0–3 ha and increased at a faster rate
in meadows of 8–11 ha (no sampled meadows were in the range of 4–8 ha) (Fig. 2). Plots
closer to roads had higher plant richness. Richness of meadow specialist perennials also
increased with meadow size (richness increased steeply in meadows from 0 to 4 ha) and
was negatively related to distance to the nearest meadow (richness was higher for meadows
close to another meadow).
Plant community structure
Meadow area in 1949 explained more variation in plant community structure in montane
meadows than other variables, including meadow area in 2005. Meadow area in 1949,
slope, distance to forest, meadow area in 2005, and aggregated 2005 fragment area
explained variation in plant community structure (Pearson’s r
2
[0.3) in the final three-
dimension NMDS ordination (NMDS final stress 9.59309, final instability 0.00000)
(Fig. 3). NMDS axes 1 and 2 explained 73 and 16 % of the variance, respectively, for a
Table 1 Summary of the results of the GAMM models of plant richness by degree of specialization, and
moth richness and abundance by feeding guild, including the total variance explained, deviance explained
(GAMM), and the variables (pvalues in parentheses) included in the best fit models
Dependent variable Adjusted
R
2
Deviance
explained (%)
Explanatory variables in the best fit
model
Total plant richness 0.725 80.8 1949 meadow area (ha) (0.001)
Distance to road (m) (0.009)
Meadow specialist
perennial plant richness
0.771 82.9 1949 meadow area (ha) (0.0002)
Distance to nearest meadow (m) (0.04)
Herb-feeding moth richness 0.184 23.1 Calendar day (\0.001)
1949 meadow perimeter (m) (0.0007)
Distance to road (m) (0.04)
Herb-feeding moth abundance 0.318 42.9 Calendar day (\0.001)
Percent open vegetation (\0.001)
Distance to forest 2005 (\0.001)
Gymnosperm-feeding moth
richness
0.353 38.9 Calendar day (\0.001)
New forest (ha) (0.002)
Distance to nearest meadow (m) (0.03)
Gymnosperm-feeding
moth abundance
0.208 40.8 Calendar day (\0.001)
New forest (ha) (\0.001)
Distance to road (m) (\0.001)
Woody angiosperm-
feeding moth richness
0.429 46.8 Calendar day (\0.001)
2005 Meadow perimeter (0.0002)
Distance to road (m) (\0.001)
Woody angiosperm-
feeding moth abundance
0.453 52.0 Calendar day (\0.001);
2005 Meadow perimeter (\0.001);
Distance to road (m) (\0.001)
For the moths, the best fit models were limited to include only calendar day and one meadow size
measurement
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total r
2
of 89 %. Meadow area in 1949 was strongly correlated with plant community
structure (r
2
=0.611 with Axis 1, the dominant axis). Distance to forest, 2005 meadow
area, and aggregated 2005 fragment area also were correlated with Axis 1 (r
2
=0.377,
0.428, and 0.361, respectively), the dominant axis. Slope was correlated with Axis 2
(r
2
=0.564), the minor axis. Overall, as meadows become smaller, their plant commu-
nities become more similar to non-meadow, forested communities.
Plant community structure in 2009 was more related to meadow area in 1949 than
meadow area in 2005, according to the MRPP analysis. The 1949 meadow area category
had a higher effect (A =0.349, p0.05) than the 2005 area category (A =0.285,
p0.05).
Fig. 2 Predicted anomalies (±95 % confidence interval) of aall meadow plant richness related to meadow
area in 1949 (ha), bperennial meadow plant richness related to meadow area in 1949 (ha), cherb-feeding
moth richness related to calendar day and meadow area in 1949 (ha), and dherb-feeding moth abundance
related to calendar day and percent open vegetation in 2005
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Nocturnal moth richness and abundance
A total of 2,923 individuals from 232 moth species were recorded in 65 samples in
montane meadows over 3 years (2008–2010). The number of individuals caught in a single
sample varied from 4 to 146, with an average of 45 individuals. Overall species richness
varied from 3 to 40 per sample, with an average of 17. All three major feeding guilds were
well represented and included abundant to rare species. The seasonal trends represented by
these traps are consistent with those demonstrated by a 5-year study in the same region
using similar techniques (Highland et al. 2013; Fig. 6in Appendix).
Factors explaining richness and abundance of moths varied among herb-feeding,
woody-angiosperm-feeding, and gymnosperm-feeding moth guilds (Table 1; Fig. 4).
Calendar day was the only variable included in all of the best-fit models; this accounts for
the rapid turnover of moth species over the summer. Richness and abundance of herb-
feeding moths peaked earlier in the summer than for woody angiosperm- and gymnosperm-
feeding moths. Richness of herb-, gymnosperm-, and woody-angiosperm-feeding moths
peaked on days 185, 210, and 210, respectively, while abundance of herb-, gymnosperm-,
and woody-angiosperm-feeding moths peaked on days 220, 185, and 215, respectively. All
best-fit models also included some measure of habitat area or perimeter. Best-fit models for
richness of herb-feeding moth species included meadow area in 1949, but the best-fit
model for herb-feeder abundance included the 2005 percent open vegetation within 100-m
of the trap (Fig. 4a, b). According to the GAMM model, herb-feeding moth richness was
equivalent to the mean response in meadows with a 1949 area of up to approximately 6 ha,
then increased more steeply relative to the mean in meadows with a larger 1949 area. Herb-
feeding moth abundance decreased relative to the mean when the percent open vegetation
was \20 %, then increased steeply when the percent open vegetation was 20–50 %, then
was consistent with the mean response when the percent open vegetation was over 50 %.
Best-fit models for richness and abundance of woody-angiosperm-feeding moth species
included the 2005 meadow perimeter. Best-fit models for richness and abundance of
gymnosperm-feeding moth species included the area of new forest added from 1949 to
2005, which is the amount of meadow lost to forest encroachment. Woody-angiosperm-
feeding moth richness and abundance decreased in meadows with perimeters smaller than
Fig. 3 3-D non-metric multidimensional scaling ordination of vegetation plots along axis 1 and axis 2 using
grouping variables derived from 1949 meadow area
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Fig. 4 Predicted anomalies (±95 % confidence interval) of awoody angiosperm-feeding moth richness
related to calendar day and meadow perimeter in 2005 (m), bwoody angiosperm-feeding moth abundance
related to calendar day and meadow perimeter in 2005 (m), cgymnosperm-feeding moth richness related to
calendar day and area of new forest 1949–2005 (ha), and dgymnosperm-feeding moth abundance related to
calendar day and area of new forest 1949–2005 (ha)
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500 m, but increased in meadows with perimeters 500–2,000 m (Fig. 4c, d). Gymnosperm-
feeding moth richness and abundance decreased where 0–3.5 ha of meadow converted to
forest from 1949 to 2005, but increased where more than 3.5 ha of meadow converted to
forest from 1949 to 2005 (Fig. 4e, f).
Discussion
Plant and moth specialists in naturally contracting montane meadows in Oregon appear to
be subject to an extinction debt. Both richness of plant and moth specialists and community
structures of montane meadow plant species displayed a lagged response to landscape
change; variation in richness was better explained by historic rather than present meadow
configuration. These results are similar to multiple studies in northern Europe, which
showed that the patch size of semi-natural agricultural grasslands decades prior to the date
of the study explained grassland plant specialist perennial richness better than current
grassland patch size (Cousins and Vanhoenacker 2011; Cristofoli et al. 2010; Helm et al.
2006; Krauss et al. 2010; Lindborg 2007; Sang et al. 2010). However, Adriaens et al.
(2006), found no evidence of an extinction debt in calcareous grassland remnants in
Belgium. Our study provides the first evidence that the richness of short-lived insect
species and their host-plants may exhibit a lagged response to the loss of their preferred
habitat, while their abundances do not and that this phenomenon is partly dependent upon a
mosaic of habitat patches of varying qualities, making it a response of the meta-community
at the landscape level.
Meadow size in the western Cascades of Oregon in 1949 explained more variation in
overall plant richness, richness of meadow-specialist plants, and meadow plant community
structure than meadow area in 2005. In other words, the greatest plant species richness
today occurs in meadow fragments that were parts of large meadows in 1949, rather than in
the meadow fragments that are largest today. This lagged relationship was observed not
only for meadow-specialist perennials, as typically theorized (Kuussaari et al. 2009;
Vellend et al. 2006), but also for meadow specialist annuals and invading tree species.
While extinction debt has been shown to occur in patches that are responding to rapid
change, as from a clearcut leaving an isolated remnant, patches experiencing gradual
change with multiple nearby other fragments have been little studied. This study shows that
extinction debt also occurs in patches that are experiencing gradual change and have other
nearby fragments. Hence, gradual tree invasion of montane meadows has exerted pro-
nounced, delayed effects on local extinction and meadow plant community structure.
Moreover, the smallest meadow fragments in 1949 had lowest diversity in 2009, while
plant richness was higher for meadow fragments near roads, possibly due to the corridor
effect of roads on ruderal species, and other meadows, as expected from island biogeog-
raphy theory (e.g., Diamond 1972). As meadows become smaller, their plant communities
become more similar to forested plant communities, with the smallest sampled meadows
being more similar to forested areas than to large meadows.
Like meadow specialist plants, moth richness also displayed a lagged relationship with
meadow configuration, consistent with extinction debt, even though moths are short-lived
and might respond rapidly to habitat loss. After accounting for seasonal species turnover,
richness of meadow specialist moths was highest in areas that had been large meadows in
1949, rather than areas that are large meadows today, consistent with extinction debt.
However, herb-feeding moths are more abundant in meadows that are large today. Thus, as
a meadow fragments contracts, moth abundance decreases to the point that the species
2540 Biodivers Conserv (2014) 23:2529–2544
123
becomes extirpated. We hypothesize that moth species are able to persist due to the
persistence of their long-lived perennial host-plants, leading to a lagged response to habitat
loss in the largest meadows, though moth richness appears to decrease faster than plant
richness in moderate to small-sized meadows.
Our findings indicate stronger evidence for extinction debt in meadow-specialist noc-
turnal moths than has been documented for butterflies or diurnal moths in European
grasslands. In Estonia, both past and present-day area of contracting calcareous grasslands
explained the richness of butterflies and meadow specialist diurnal moths (Sang et al.
2010). In a broader-scale study, contemporary habitat patch size explained more variation
in diversity of European butterflies than historic habitat sizes (Krauss et al. 2010). While
most of the moths in our study have smaller wing lengths and body sizes than butterflies
and, therefore, smaller dispersal distances (Nieminen 1996; Hamba
¨ck et al. 2007;O
¨ckinger
et al. 2010), they exhibited evidence of extinction debt while the European butterflies did
not. This suggests that moths in our study were able to survive due to the persistence of
their host plants and, perhaps, due to patches of usable habitat within the forest mosaic
surrounding the meadows. Also, this landscape is a mosaic of meadows and forest, unlike
most of the European grassland patches that were mostly surrounded by agricultural or
urban landscapes. The matrix of forest potentially possesses isolated host plants and,
therefore, occasional dispersal opportunities. Dispersal of moths between meadows is
possible and likely occurs with some species, though some meadows are very isolated and
most of the moth species in this study are relatively small-bodied with small wingspans
(Highland et al. 2013). Moths with small bodies and small wingspans have been shown to
have very limited dispersal capabilities (Nieminen 1996;O
¨ckinger et al. 2010), suggesting
that moth dispersal and migration from one meadow to another likely accounts for only a
small portion of moth assemblages identified in the different meadows through this study.
In addition, if larger meta-community population assemblage and richness was the driver
for the observed patterns, meadow complex area for 1949 or 2005 would have explained
moth richness better than local meadow metrics. Because historic local meadow metrics
and not a landscape level metric explained moth richness better, local populations are the
primary drivers in the moth assemblages that we have sampled, with migrants or ‘‘tourists’
comprising only a minor part. Additionally, in a previous study, we found that these
meadows had highly distinctive moth assemblages that contrasted greatly with the sur-
rounding forests, which dominate the western Cascades mountain range (Highland et al.
2013). Therefore, little immigration of tourist species is occurring from other parts of
western Oregon to these meadows. This suggests that extinction debt, in a relatively natural
landscape of habitat mosaics, is a landscape meta-community level phenomenon dependent
on multiple landscape characteristics that provide not only large habitat patches but also
small, isolated habitat patches potentially useful for connectivity but still largely domi-
nated by local landscape characteristics and populations (Dennis et al. 2013).
As meadows in the western Cascades of Oregon have contracted, the diversity of
meadow specialist herbaceous plants and the moth species that feed on these plants has
declined, while retaining a memory of past meadow sizes. At the same time, moth species
that feed on woody flowering plants and conifer trees apparently have increased as trees
have invaded and fragmented formerly large continuous meadows. As trees invade con-
tracting meadows, the moths that feed on those species gradually invade the former
meadow as well, while the moth species that formerly inhabited the meadow persist in
relict meadow fragments. Because extinction debt delays the disappearance of species
whose habitat is declining, while species diversity has increased in expanding habitat
types, meadow invasion by trees produces a transient local biodiversity surplus.
Biodivers Conserv (2014) 23:2529–2544 2541
123
Montane meadows in the Cascades of Oregon have been shrinking in size and frag-
menting for several centuries (Halpern et al. 2010; Highland 2011). Montane meadows are
declining throughout much of the western US (e.g., Norman and Taylor 2005; Zier and
Baker 2006). Because montane meadows occupy \5 % of the landscape, but contribute a
unique assemblage of species, their preservation and potential restoration represent an
important goal for biodiversity conservation. The apparent lagged extinction of plants and
moth species in montane meadows of the western Cascades may be representative of
extinction debt in montane meadows throughout the western US and provides an oppor-
tunity for restoration that will promote landscape-level biodiversity in forested mountain
landscapes in the western US. Ongoing research suggests a combination of woody plant
removal, specifically, and potentially fire applications could assist in the maintenance and
restoration of these meadows (Halpern et al. 2012). Such restorations could potentially lead
to a increase and recovery of some plant and insect populations currently threatened with
local extinction though present in small numbers.
Acknowledgments This research was supported by grants to the HJ Andrews Experimental Forest and
LTER (NSF 0823380) and the NSF EcoInformatics Summer Institute REU (NSF 1005175). We thank J.
Miller for use of the moth traps and insightful discussions about moths. We thank M. Santelmann for
vegetation related discussions. We thank EISI students from 2008 for field assistance, and D. Ross and P.
Hammond for help with moth identifications.
Appendix
See Figs. 5and 6.
Fig. 5 Scatterplot showing the distribution of samples by calendar day (x-axis) versus 1949 meadow area
(y-axis). Note that samples were taken in large and small meadows throughout the sampling season
2542 Biodivers Conserv (2014) 23:2529–2544
123
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Chapter
The diversity of life on Earth, which is the engine of ecosystem functions and the ecosystem services they provide, is the product of a long list of evolutionary and ecological processes that are mostly hidden to the casual observer. A useful and popular analogy for explaining what biodiversity is asks us to imagine looking down at a pond and seeing a variety of bubbles breaking the surface; some bubbles are small, some big, some aggregated with others, and some isolated. We then have to determine what went on under the surface to generate the pattern in bubble distribution and abundance. The bubbles that originated in the sediment probably underwent a considerable amount of change before coming to the surface—some bubbles fused with others, some underwent fission, some got trapped and never reached the surface, some drifted outside our field of view, and some originated elsewhere and drifted into our field of view.
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Supplementary Figures 1-3, Supplementary Table 1, Supplementary Notes 1-6 and Supplementary References
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Summary. Recent work by Reiss and Ogden provides a theoretical basis for sometimes preferring restricted maximum likelihood (REML) to generalized cross-validation (GCV) for smoothing parameter selection in semiparametric regression. However, existing REML or marginal likelihood (ML) based methods for semiparametric generalized linear models (GLMs) use iterative REML or ML estimation of the smoothing parameters of working linear approximations to the GLM. Such indirect schemes need not converge and fail to do so in a non-negligible proportion of practical analyses. By contrast, very reliable prediction error criteria smoothing parameter selection methods are available, based on direct optimization of GCV, or related criteria, for the GLM itself. Since such methods directly optimize properly defined functions of the smoothing parameters, they have much more reliable convergence properties. The paper develops the first such method for REML or ML estimation of smoothing parameters. A Laplace approximation is used to obtain an approximate REML or ML for any GLM, which is suitable for efficient direct optimization. This REML or ML criterion requires that Newton–Raphson iteration, rather than Fisher scoring, be used for GLM fitting, and a computationally stable approach to this is proposed. The REML or ML criterion itself is optimized by a Newton method, with the derivatives required obtained by a mixture of implicit differentiation and direct methods. The method will cope with numerical rank deficiency in the fitted model and in fact provides a slight improvement in numerical robustness on the earlier method of Wood for prediction error criteria based smoothness selection. Simulation results suggest that the new REML and ML methods offer some improvement in mean-square error performance relative to GCV or Akaike's information criterion in most cases, without the small number of severe undersmoothing failures to which Akaike's information criterion and GCV are prone. This is achieved at the same computational cost as GCV or Akaike's information criterion. The new approach also eliminates the convergence failures of previous REML- or ML-based approaches for penalized GLMs and usually has lower computational cost than these alternatives. Example applications are presented in adaptive smoothing, scalar on function regression and generalized additive model selection.
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The first edition of this book has established itself as one of the leading references on generalized additive models (GAMs), and the only book on the topic to be introductory in nature with a wealth of practical examples and software implementation. It is self-contained, providing the necessary background in linear models, linear mixed models, and generalized linear models (GLMs), before presenting a balanced treatment of the theory and applications of GAMs and related models. The author bases his approach on a framework of penalized regression splines, and while firmly focused on the practical aspects of GAMs, discussions include fairly full explanations of the theory underlying the methods. Use of R software helps explain the theory and illustrates the practical application of the methodology. Each chapter contains an extensive set of exercises, with solutions in an appendix or in the book’s R data package gamair, to enable use as a course text or for self-study.
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The Beals smoothing function, also known as the sociological favorability index, is a data transformation for heterogeneous ecological community data. After Beals smoothing, virtually any ordination method can successfully extract the dominant patterns in the data. Presence–absence (1,0) values in the raw data matrix are replaced by continuous probabilities. The transformed value in a given cell represents the probability of a particular species occurring in a particular sample unit, based on the other species that were present in that sample unit. These probabilities are constructed from a matrix of joint occurrences between species. Beals smoothing is appropriate for heterogeneous community data sets with a large number of zeros in the data matrix (i.e. most samples contain a fairly small proportion of the species). The method may also be useful for smoothing out differences due to varying sampling intensity or where sample quality is uneven. Beals smoothing is also desirable when the data set c...
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Aim Species are lost world‐wide because of habitat destruction and fragmentation. Impacted communities can exhibit transient dynamics in response to such environmental changes, where slow extinctions and immigration delay the arrival to a new equilibrium. Life history traits such as generation time, resource use and dispersal capacity, as well as landscape history can be expected to affect possible extinction debt, but few have examined this for multiple taxa in the same study and particularly so for arthropods. The aim was to assess under which current and historical land use circumstances an extinction debt occurs for vascular plants and three insect taxa. Location South‐eastern Sweden. Method We sampled current species richness of habitat specialist and generalist butterflies, bees, hoverflies, and vascular plants in 45 dry to mesic semi‐natural grassland fragments of various size and degree of connectivity, and situated in landscapes with contrasting land use conversion history. Habitat loss was estimated in each landscape by comparing modern maps to ~45 year old digitized aerial photographs. An extinction debt can be assumed if historical habitat size and connectivity better explain current species distribution than current habitat variables do. Results Bees responded rapidly to habitat loss possibly as a result of their primary nesting resource being destroyed. Interestingly, species richness of specialist plants was best explained by historical habitat connectivity, richness of hoverflies by historical habitat area, and richness of butterflies by both historical habitat area and connectivity, indicating extinction debt for these taxa. Habitat generalist butterflies and hoverflies, but not plants and bees, exhibited extinction debt mainly in relation to habitat area. No effect of landscape type was found on the observed extinction debt. Main conclusions Slow extinctions of persistent and long‐lived plants might explain extinction debt for both plants and herbivorous insects linked to these plants.