ChapterPDF Available

Recent Advancements in Mycoremediation

Authors:

Abstract and Figures

The anthropogenic activities and other unintentional causes have imposed a strain on the ecosystem and natural resources. Bioremediation is a rapidly emerging field of science that deals with eco-friendly methods and approaches to clean such environmental pollutants. Both natural resources and inorganic contaminants including radioactive compounds may be transformed or detoxified by microorganisms. Fungi are an important candidate in bioremediation studies. They play a significant role in environmental cleaning through their versatile metabolic and enzymatic activities. Their biomass comprises a high proportion of cell wall materials with good metal-binding characteristics. Because of their negatively charged cell walls, they can serve as a cation exchanger in the metal-contaminated sites. Furthermore, fungal biomasses act as biosorption materials and therefore, have higher practical utility in wastewater treatment plants. In this regard, the present chapter highlights the significance of fungal-based bioremediation approaches for making the environment clean and sustainable.
Content may be subject to copyright.
Chapter 6
Recent Advancements in Mycoremediation
Ihsan Flayyih Hasan AI-Jawhari
6.1 Introduction
Human activities are continuously interfering with the environmental processes and
making them polluted by adding heavy metals, radionuclides, hydrocarbons, and
contaminants. Furthermore, the pollution of surface water, and groundwater as a
result of urban and industrial growth has imposed negative consequences on both
humans and the environment (EEA 2003; Kour et al. 2021). Therefore, the require-
ment for eco-friendly approaches is increasing day by day that can treat the pollut-
ants in an effective way.
6.2 Impact of the Agrochemicals on the Ecosystem
Agriculture has a signicant effect on terrestrial as well as aquatic ecosystems. The
injudicious use of pesticides, plant hormones, fertilizers, and other agrochemicals
has caused several environmental concerns (Debbarma et al. 2017; Bhatt et al.
2021a,b). Similarly, agriculture is the primary source of PO
43
,NO
3
, and pesticide
emissions, with the continuous increment over the last 35 years (Loebenstein and
Thottappilly 2007; Önder et al. 2011). Further, unorganized land remediation poli-
cies have decreased the vegetation, soil organisms, and soil organic matter (Walls
2006; Arias-Estévez et al. 2008; FAO 2009).
I. F. H. AI-Jawhari (*)
Department of Biology, College of Education for Pure Sciences, University of Thiqar,
Al-Nasiriyah, Iraq
©The Author(s), under exclusive license to Springer Nature Switzerland AG 2022
D. C. Suyal, R. Soni (eds.), Bioremediation of Environmental Pollutants,
https://doi.org/10.1007/978-3-030-86169-8_6
145
6.2.1 Eutrophication and Algal Blooms in the Lakes
Blooming is the uncontrolled growth of the photosynthetic organisms in the lake due
to the excessive accumulation of organic carbon, phosphate, and nitrates. Direct
runoff, deforestation, and agrochemical spray drift transfer terrestrial phosphate and
nitrate to the water environment and causes eutrophication (Fig. 6.1). Due to it, the
population of algae and phytoplankton grows rapidly due to high concentrations of
chemical nutrients that promote their growth. As these organisms grow, the O
2
is
depleted, resulting in life stop in the profundal zone due to the lack of oxygen (Rial-
Otero et al. 2003). It is greatly affected by heat, nutrients, ow rate, and other abiotic
elements (OECD 2012).
Impact indicators:
Large increase in microalgae and macroalgae growth on the epilimnion layer. The
sunlight penetration gets decreased which leads to the loses of underwater aquatic
vegetation.
A nutrient imbalance can lead to a change in microalgae components, allowing
toxic algal blooms to ourish.
Reduce diversity and make a negative impact on the food web due to changes in
benthic species composition.
In the coastal and maritime environment, it results in reduced dissolved O
2
levels.
Fig. 6.1 Blooming processes in the lakes
146 I. F. H. AI-Jawhari
Besides, phosphorus, nitrogen is another important factor that contributes
towards eutrophication. Several algal species are able to x atmospheric nitrogen
into nitrate (Howarth 2006). It was observed that nitrogen load in the Yellow Sea
(China) and the North Sea (Europe) was 1015 times higher than the natural levels.
Moreover, nitrogen loads to US coastal waters were on average 6 times higher than
natural levels (Howarth 2006). In Europe and the United States, agriculture is now
the primary source of nitrogen supply.
6.3 Mycoremediation of Pesticides
Pesticides have a signicant economic effect by protecting and lowering pest-related
agricultural sabotage and thereby, increasing productivity and yield. In recent years,
pesticides used have been increased in agriculture. Due to their excessive use
throughout the world, the 1940s and 1950s are known as the pesticide era(Graeme
2005). Aside from agricultural uses, pesticides are used in large quantities for urban
plantations maintenance, sanitary handling and storage, vegetation control, and
forest protection. Pesticides have also been used in the reduction of the disease viz.
malaria and typhus fever. Every year, hundreds of thousands of tonnes of pesticides
are used around the world to boost agricultural production by reducing pests (Liu
and Xiong 2001).
Overuse of agrochemicals has imposed negative impacts on the environment
(Giri et al. 2017a,b). They reach specic organisms in less than 5% of cases, with the
majority of them leach into the subsoil and contaminate groundwater (Kookana et al.
1998). Alternatively, if it is immobile, it causes magnication by increasing
chemicals levels in the aquatic ecosystem and harm native organisms (Amakiri
1982). Pesticide pollution can cause contamination of surface and sediments (Juhler
et al. 2001; Bhatt et al. 2021a). Moreover, it has a negative impact on microbial
diversity, especially bacterial, archaeal and fungal communities (Ahmed et al. 1998).
Agrochemicals spray also affects non-vegetation. They can show deviation or
volatility from treatment regions that have been processed to non-target plants,
climate, and the soil. Low crop yields, the devastation of soil organisms even in
microhabitats, and unwanted chemical residue concentrated in crops are the main
outcomes of agrochemical overuse (Edwards 1986). Huge amounts of pesticide are
used, within local soil habitat and thus cause pesticide spills (Gan and Koskinen
1998). Pesticides are poisonous and intransigent by the environment, causing pol-
lution in ecosystems. As a result, health issues occur in the end-users. Carcinoge-
nicity, mutagenicity, immunosuppression, hormonal imbalance, and different other
health issues are all side effects of pesticides (Gupta 2004).
Chemical treatment, volatilization, and incineration are all physical and chemical
processes for removing pesticide residues from the soil. Large quantities of acids and
alkalis are produced as a result of chemical treatment and volatilization, which must
be discharged. Incineration is a highly dependable physicalchemical process for
pesticide removal; but, due to the risk of harmful pollution and high economic costs,
6 Recent Advancements in Mycoremediation 147
it has a lot of public opposition. Further, excavating soil from a contaminated site
and transporting it to other location for cleaning, is expensive and inefcient, and
require a large storage region (Nerud et al. 2003). Therefore, there is a pressing need
to evolved pesticide remediation techniques that are safe, convenient, and cost-
effective (Zhang and Chiao 2002). As a result, many biological processes involving
the bioremediation of organic substances by organisms have grown in popularity as a
treatment option for pesticide residues in terrestrial and aquatic ecosystems.
Bioremediation is usually is less-costly than physical and chemical methods for
removing contaminants without the need for excavation. This kind of process has the
ability to treat pollutants onsite (Kearney and Wauchope 1998). Microorganisms are
the main factor for the recirculation of biological materials and, they have developed
a diverse set of enzymes, activation systems, and pathways for degrading and
utilizing pesticides as a source of energy (Talaro and Talaro 2002; Goel et al.
2008; Kumar et al. 2021).
Mycodegradation and my deterioration are two approaches in which fungi
degrade a wide range of contaminants (Singh et al. 2021). Mycoremediation is the
use of fungi in the ecosystem to degrade wastes and contaminants. This term is
derived from two words—“mukēsand remediumrepresenting the meaning
fungusand restoring balance, respectively.
6.4 Mycoremediation of Herbicides
Many fungi, such as Phanerochaete velutina, Coriolus versicolor, and Pleurotus
ostreatus have been the capacity to break down different herbicides like atrazine, and
various abilities (Bending et al. 2001). AI-Jawhari and AI-Sead (2016) showed that
Aspergillus versicolor was more efcient for biodegradation and the ve-week was
the optimum period for biodegradation of granstar (Tribenuron methyl) to different
metabolites.
Zboniska et al. (1992) investigated the remediation of glyphosate by Penicillium
citrinum.Penicillium notatum was found to use the herbicide as a source of P and
use the CH
6
NO
3
P route to break it down (Bujacz et al. 1995). Trichoderma
harzianum, and Aspergillus niger have shown studies to break down glyphosate
(Krzysko-Lupicka et al. 1997). Klimeka et al. (2001) have shown Penicillium
chrysogenum was the important microorganism to use glyphosate as a nitrogen
source. Since the fungal cell is known to lack observable activity of the enzyme
nitrogen reductase, this isolate was incapable of converting NO
3
to NH
4+
. Further,
Lipok et al. (2003) have discovered a plant pathogen, Alternaria alternata that was
able to use glyphosate as a sole source of nitrogen.
Mougin et al. (1994) conrmed that the white-rot fungus Phanerochaete
chrysosporium biotransformed atrazine and resulted in the reduction of herbicide
concentration by 48% under in vitro conditions within the early 4 days after
treatment. The formation of hydroxylated and/or N-dealkylated metabolites was
clearly demonstrated by the mineralization of the herbicides ethyl group. In fungi
148 I. F. H. AI-Jawhari
N-Dealkylation is more common than hydroxylation, resulting in atrazine hydrolysis
through direct or secondary metabolite (Mougin et al. 1994).
Bending et al. (2002) tested the ability of nine species of white-rot fungi
to degrade different mono-aromatic pesticides. The breakdown of atrazine
(20 μgg
1
) was measured in sterilization made up of dirt, wheat straw, and peat.
Bastos and Magan (2009) have examined the ability of T. versicolor to break down
atrazine in sterilized soil for 24 weeks. The fungal treatment was found to accelerate
atrazine breakdown. Similarly, Elguetaa et al. (2016) have analyzed the atrazine
degrading ability of white-rot fungi and found it effective.
6.5 Mycoremediation of Heavy Metals
Heavy metal refers to any metal that is relatively denser and more toxic in compar-
ison to the other metals, even at its lower concentrations. Heavy metal pollution is
most visible in mining regions and abandoned mine areas. Metals are released into
the atmosphere during their extraction and processing processes (Lenntech Water
Treatment 2004). When heavy metals are present in the environment, they are well
known for their toxicity. From the standpoints of ecology, evolution, nutrition, and
the environment, it is a major source of interest. Heavy metals accumulation in soils
is a signicant source of concern in agricultural production because it has negative
consequences on food production, cereals growth lead to phyto-poisons, soil
microbe, and human health (Dash et al. 2021). The biological toxicity impacts of
heavy metals in human biochemistry are a major source of concern. These heavy
metals are non-biodegradable and possess a longer half-life. Heavy metals can be
absorbed by the crops growing in the polluted regions. The biodegradation method
becomes hard if the soil has been polluted by heavy metals. Su (2014) has enumer-
ated several properties of heavy metal pollution in the environment, including its
global impact and distribution, latency and long-term damage, arduous biodegrada-
tion, and so on. Further, one of the major risk factors associated with heavy metals is
an occupational hazard. Workers in mines and those engaged in the manufacture of
heavy metals, as well as residents near industrial sites, have been exposed to
suspended particulate matter (Ogwuegbu and Muhanga 2005).
6.5.1 Toxicity of Heavy Metals
Lead (Pb)
There are many different sources of lead emissions. Mainly it discharges to the
ecosystem as a result of smelting and mining of mines. Lead poisoning occurs when
a lead is ingested or inhaled through any means inside the body (Ferner 2001).
Further, it causes severe health problems i.e.: hemoglobin synthesis, kidney dys-
functions, joint and reproductive system impairment, as well as heart dysfunction
6 Recent Advancements in Mycoremediation 149
(Ogwuegbu and Muhanga 2005). Also, ingestion may cause neurological problems
including serious and irreversible brain damage. The brain development of children
is also harmed (Udedi 2003).
Mercury
Eating polluted sh, amalgam dental llings, coal burning, gold mining are some
major sources of mercury exposure (Balaguru et al. 2016). In its inorganic form,
mercury is extremely toxic. Oral conditions such as gingivitis and stomatitis, serious
brain and CNS damage, and congenital malformations are linked with this pollution
(Ferner 2001; Lenntech Water Treatment 2004).
Arsenic
Some sources of arsenic include long-term consumption of arsenic-contaminated
water and consumption of oil additives and plants cultivated on arsenic-rich soils.
Arsenic has been linked to an increased risk of cancer. Arsenic poisoning can cause
cancer in a variety of organs, including the kidney, liver, heart, respiratory system,
and skin (Ratnaike 2003; Kumar et al. 2021). Moreover, symptoms may worsen if
acute toxicity occurs. It causes muscle pain and stomach pain followed by blood in
urine, loose motions, vomiting, and convulsions. Arsenic poisoning typically
impairs the functioning liver, kidney, skin, and lungs (Kapaj et al. 2006). Arsenic
discouraged the production of (ATP) through breathing (INECAR 2000), and high
levels of exposure can result in death (Ogwuegbu and Ijioma 2003).
Cadmium
Cadmium, as a contaminant, exists in phosphate fertilizers, industrial dyes, and other
outputs as a pollutant. Its a highly poisonous and dangerous metal. Cadmium-
containing goods are rarely recycled, but they are often thrown away with household
waste. As a result, pollution of the surrounding environment occurs particularly
when waste is incinerated. It is released as a by-product during the rening of zinc
(and sometimes lead), (IARC 1993). Cigarette smoking, battery making, coatings,
plastics making, and air from the smelting reneries are the main sources of
cadmium poisoning that can harm the kidney and liver. Cadmium is a human
carcinogen according to the World Health Organization (Ilyasova and Schwartz
2005).
6.5.2 Remediation of Heavy Metals by Fungi
Heavy metals biosorption is aided by exploring endophytic fungi (Yang et al. 2012).
More specically, Penicillium sp., and Aspergillus niger have been shown to possess
a higher biosorption potential in removal metal-contaminant environments by
adsorbing heavy metals from the mixed pollutants (Ahmad et al. 2006). The
biological materials potential to absorb heavy metals from the contaminated site
using metabolically inuenced or physicochemical adsorption mechanisms is com-
monly referred to as biosorption (Fourest and Roux 1992). It entails species
150 I. F. H. AI-Jawhari
removing metal ions by separating organisms solid and liquid (Yang et al. 2012).
Biosorption has received a lot of publicity because it is a very powerful and practical
way to remove heavy metals (Cruz et al. 2004; Ting et al. 2008). According to an
estimate, biomass, whether life or death, can serve as a bio-absorption and high-
potency heavy metal ions (Bayramoglu et al. 2002).
Xiao et al. (2010) have obtained an endophytic fungus, Microsphaeropsis
sp. LSE10, from the plant Solanum nigrum. It has shown higher Cd bio-absorption
ability. Similarly, Deng et al. (2011) have demonstrated that an endophytic Mucor
species isolated from Brassica chinensis was able to bioaccumulate and absorb
heavy metals, especially lead and cadmium. Choo et al. (2015) have demonstrated
that the fungal endophyte of Nypa fruticans, Pestalotiopsis sp., was able to grow
luxuriously under the high concentration of chromium, lead, copper, and other heavy
metals. Further, Zhang et al. (2008) have reported the heavy metal accumulating
property in an endophytic Exophiala pisciphila. Li et al. (2012b,2016) have
observed that a higher abundance of metal-resistant endophytes in any host plant
increases the ability of phytoremediation. Moreover, the soil heavy metal concen-
tration affects the colonization rate of the endophytes and thus, bioaccumulation of
the contaminants. Further, the dominant genera were more resistant to heavy metals
than other genera (Li et al. 2016). In another study, Li et al. (2012a) have shown that
regions contaminated with lead and zinc encouraged the colonization of the endo-
phytes and thus promoted phytoremediation. Deng et al. (2014) have reported that
Portulaca possesses high heavy metals aggregation power.It was correlated with the
extensive mycelia producing capacity of this genus (Meena and Sarita 2017).
Kratochvil and Volesky (1998) have summarized the differences between traditional
and biological methods of biosorption. They have revealed that biological methods
are cost-effective, highly efcient, easy to recover, and eco-friendly in comparison to
the conventional alternatives.
6.5.3 Mycoremediation of Hydrocarbon Pollution
Hydrocarbons are the carbon and hydrogen-containing compounds that can be
generated from fuels and other similar sources i.e.: diesel, oil, kerosene, benzene,
ethylbenzene, toluene, and xylenes. Among these, aromatic hydrocarbons are more
dangerous for the environment than aliphatic ones.
The presence of crude oils and similar contaminants in the soil, cause harmful
inuences on soil organisms (Scott 2003). Petroleum hydrocarbon pollution of soil
causes several issues. Petroleum hydrocarbon composition is found in the atmo-
sphere is harmful to the environment (Scott 2003). Owing to the accumulation of
hydrocarbon pollutants in animal and plant tissues, wide harm inuence by hydro-
carbons pollutants to the local ecosystem can result in mutations and/or deaths
(Alvarez and Vogel 1991). The health risks associated with carbon emissions derive
mainly from direct contact with a polluted ecosystem of pollutants, as well as
secondary contamination of water beneath the soil.
6 Recent Advancements in Mycoremediation 151
PAHs are Polycyclic aromatic hydrocarbons that are resistant to biodegradation
and are often associated with oil pollution. Maliszewska-Kordybach (1999)
found that contaminants can migrate long distances by air and precipitate on the
earths surface, plant vegetation, and water bodies (Cheema et al. 2009). The
rhizosphere of a plant controls its microbiome through different types of interactions
(Huang et al. 2004; Haritash and Kaushik 2009). Endophytes support their hosts by
using relevant degradation pathways and metabolic capacities, resulting in increased
phytodegradation of organic pollutants and decreased phyto-toxicity (Soleimani
et al. 2010). Moreover, it also affects the evaporation and transpiration of volatile
pollutants (Weyens et al. 2009).
6.6 Petroleum Biodegradation by Fungi
Many microorganisms have the efciency to remove hydrocarbons in the atmo-
sphere, water, and soil. Natural biodegradation takes a long time. As a result, rather
than relying on a single organism, microbe from different genera may work together
to expand the restricted range of degradation. Several types of microbes have been
found in petroleum-contaminated soil, water, and surface (Surovtseva et al. 1997).
For the clearance of PAH pollutants, ideas in eld degradation of pollutants are more
favored in todays environment (Ndimele 2010). Al-Hawash et al. (2019) found that
the capacity of Aspergillus sp. RFC-1 to degrade petroleum hydrocarbons was
assessed using surface adsorption, and the results showed that by day 7 of incuba-
tion, crude oil, naphthalene (NAP), phenanthrene (PHE), and pyrene (PYR) removal
capacities had reached 60.3%, 97.4%, 84.9%, and 90.7%, respectively. While, crude
oil, NAP, PHE, and PYR had biodegradation capacities of 51.8%, 84.6%, 50.3%,
and 55.1%, respectively. Extracellular enzymes extracted from the crude-oil-pol-
luted environment from six Aspergillus species efciently break down crude oil,
(Zhang et al. 2016). Penicillium sp. RMA1 and RMA2, two crude oil-degrading
fungi were isolated from the Rumaila oileld, that could grow in petroleum hydro-
carbons composition media and removed 75% and 55% of hydrocarbons, respec-
tively, suggesting that these fungi could efciency catabolism petroleum
hydrocarbons (Al-Hawash et al. 2017). The lipolytic enzyme of Aspergillus niger
isolated from an oil-contaminated ecosystem can removal polyaromatic hydrocar-
bons in petroleum polluted environment (Mauti et al. 2016). Sandhu (2016) obtained
that the high remediation capacity of Aspergillus sp. to kerosene because of its
superior mycelial growth and extracellular enzymes activity. Kadri et al. (2017)
fungi-produced enzymatic systems are important for transfer petroleum hydrocar-
bons to CO
2
or catabolism products. Extracellular enzyme production is the main
mechanism for fungal hydrocarbon degradation (Zhang et al. 2016). AI-Jawhari
(2016) found that the highest anthracene removal rates were achieved after 7-day
incubation with a mixed pure culture of Aspergillus niger and Penicillium
funiculosum. Michael et al. (2020) obtained the enzyme activity in two fungi
Aspergillus oryzae and Mucor irregularis growing them on Bushnell Haas
152 I. F. H. AI-Jawhari
(BH) mineral agar supplemented with the hydrocarbon at various concentrations,
such as 5%, 10%, 15%, and 20%, with a dextrose power. After 15 days of incuba-
tion, hydrocarbon remediation potentials of these fungi were conrmed using
GC/MS in BH broth culture ltrates pre-supplemented with 1% engine oil. The
results indicated that M. irregularis only breakdown the long-chain hydrocarbons
and BTEX. This study conrmed that A. oryzae and M. irregularis have the potential
to be exploited in the bio-treatment and removal of hydrocarbons from polluted soils.
Exploration of endophytic fungal genera in phytoremediation appears to be a
more promising feature of phytoremediation (Mohsenzadeh et al. 2010). By foster-
ing pyrene accumulation in the roots of the host, inoculation of Lewia sp., resulted in
a remarkably high removable of pyrene in comparison with non-inoculated ones
(Cruz-Hernández et al. 2013). Further, a fungal endophyte Phomopsis liquidambari,
exists to uses phenolic 4-hydroxybenzoic acid, as a sole carbon source and as a
capacity breakdown of (PAH) in pure culture. One of the most important factors in
the rhizospheric deterioration of petroleum-contaminated soils is the presence of
endophytes. Mohsenzadeh et al. (2010) have analyzed seven plant species from
hydrocarbon-polluted areas. Moreover, several endophytic Fusarium strains viz.
Fusarium acuminatum,Fusarium reticulatum, and Fusarium equiseti are also
reported to have hydrocarbon-degrading potential. This group has also proposed
that combined use of endophytes and plants were more effective than their applica-
tion. Similarly, basidiomycete, Phanerochaete chrysosporium, was discovered to
degrade many organic contaminants in 1985 (Hammel et al. 1992). With the
assistance of enzymes such as (MnP) (LiP), Phanerochaete chrysosporium is
known to break down pyrene and anthracene by oxidation (Lei et al. 2007). It is
worth noting that white-rot fungi account for one-third of the literature on
mycoremediation (Singh 2006). Various strains of white-rot fungi have been iden-
tied to work on a wide variety of organic compounds that are resistant to others.
Phanerochaete chrysosporium, the white-rot fungus, is one of the best fungi for a
breakdown of poisons and insoluble wastes throughout the setting (Singh 2006).
Figure 6.2 showed the degraded Phenanthrene by dioxygenase enzyme phnAc/
phnAd. In recent years, the signicance of white-rot fungi for fungal hydrocarbon
bioremediation has also received scientic attention (Rahman et al. 2014).
Fig. 6.2 Reaction catalyzed by the hydroxylating dioxygenase phnAc/phnAd as the rst step of the
phenanthrene degradation pathway
6 Recent Advancements in Mycoremediation 153
6.7 Myconanoparticles
Nanotechnology is a branch of science that deals with metal nanoparticles in various
forms. A nanoparticle (10
9
m) is a small piece that functions as a catalyst in terms of
its transportation and assets as a whole (Gholami-Shabani et al. 2016a,b,c). Fungi
are integral microorganisms from the catalog of microorganisms used to synthesize
metal nanoparticles and are superior to different microorganisms in several
ways. They shape a mycelial mesh, which aids in their development withstand
the ow pressure, agitation, and other bioreactor associated stresses. Further, the
potential of fungal strains to grow and reproduce on readily available, low-cost
substrates, reects their capacity to produce a wide variety of industrially important
compounds (Dhanasekar et al. 2015). The use of fungi in nanotechnology for the
making of nanoparticles is known as mycosynthesis of metal nanoparticles or
myconanotechnology (Honary et al. 2012; Prasad 2016). Many fungal species,
such as Aspergillus,Fusarium,Penicillium, and Verticillium have been used as
promising tools for metal nanoparticles. Different fungal species are potential
candidates for metal nanoparticle making. Mycosynthesis of silver, gold, gold-silver
alloy, platinum, selenium nanoparticles has already been studied. Further,
Trichoderma viride was used for green synthesis for gold nanoparticles using
para-nitro phenol and amino phenol (Mishra et al. 2014).
6.8 Biodegradation in Soils by Fungi
Heavy metal ions are believed to be immobilized by microorganisms by binding
them to their cell walls (Vankar and Bajpai 2008). Moreover, they can convert
certain pollutants into soluble substances and use them as a source of nutrients and
energy (Kumar et al. 2008). The presence of microorganisms that enhance
phytostimulation or rhizodegradation can speed up the phytoremediation method
(Kavamura and Esposito 2010).
Fungi are benecial for the biodegradation of heavy metal-polluted sites due to
they possess high biomass content (Mann 1990). Because of their negative charge,
the cell walls of fungi can act as a cation exchanger (Muraleedharan et al. 1991;
Fomina et al. 2007). Furthermore, because of their low-cost processing, fungal
biomasses may act as bio-absorption compounds (Maurya et al. 2006). Further,
fungi play a very important role on the Earth because of their ability to decompose,
turn, and cycle nutrients (Archana and Jaitly 2015). The capacity of fungi to break
down anthropogenic substances was recorded for the rst time in a study by Wunch
et al. (1999). Marasmiellus troyanus degraded PAH (benzo[α] pyrene) in liquid
culture, to the researchers. After the publication of this study, various writers and
research groups have been tasked with gathering more proof to resolve this problem
(Anastasi et al. 2013; Rhodes et al. 2014; Singh et al. 2015).
154 I. F. H. AI-Jawhari
6.9 Conclusions
Future research should be concentrated on developing real-time biodegradation
assays, and large-scale bioremediation experiments. They should use potential
native strains as well as genetically engineered microorganisms. More work is
required today to gain a deeper understanding of how agricultural soils function as
a whole, and a deeper understanding of the dynamics of these heterogeneous
ecosystems, as well as the interactions of different microorganisms. Much deeper
insight into the associated mechanisms is needed. It is possible to develop technol-
ogies to improve degradation efciency through studying the process of degradation.
Through a better understanding of the mechanisms, such as cell immobilization in
various systems and the development and use for waste removal in the eld, we will
improve the efciency of degradation. Further, fungi in the soil can be used to make
metal nanoparticles and as green remediators to investigate the ability of fungi in
heavy metal biosorption and extraction from polluted areas for the benet of the
industry. Fungi may be used as a factory for a variety of purposes, including
investigating nanoremediation, soil fertility, and ecosystem balance. Nanoparticles
may also minimize pesticide usage by enabling native fungi to biosynthesize the
nanoparticles, which is emerging as a cuttingedge technology for mankind. With
the rapid production of environmentally friendly fungal synthesis procedures, the
eld of green nanotechnology must blossom in order to make the earth greener and
safer.
References
Ahmad I, Ansari MI, Aqil F (2006) Biosorption of Ni, Cr and Cd by metal tolerant Aspergillus niger
and Penicillium sp. using single and multi-metal solution. Indian J Exp Biol 44:7376
Ahmed M, Ismail S, Mabrouk S (1998) Residues of some chlorinated hydrocarbon pesticides in rain
water, soil and ground water, and their inuence on some soil microorganisms. Environ Int
24:665670
AI-Jawhari IF (2016) Bioremediation of anthracene by aspergillus Niger and Penicillium
funiculosm. Int Res J Bio Sci 5(6):111
AI-Jawhari IF, AI-Sead KG (2016) Fate of herbicide Granstar (Tribenuron methyl) in wheat eld in
AI-Nasiriya governorate. Int Res J Bio Sci 5(8):2237
Al-Hawash AB, Alkooranee JT, Abbood HA, Zhang J, Sun J, Zhang X, Ma F (2017) Isolation and
characterization of two crude oil-degrading fungi strains from Rumaila oil eld, Iraq. Biotechnol
Rep 17:104109. https://doi.org/10.1016/j.btre.2017.12.006
Al-Hawash AB, Zhang X, Ma F(2019) Removal and biodegradation of different petroleum
hydrocarbons using the lamentous fungus Aspergillus sp. RFC-1. Microbiol 8(1):114.
https://doi.org/10.1002/mbo3.619
Alvarez PJ, Vogel TM (1991) Substrate interactions of benzene, toluene, and para-xylene during
microbial degradation by pure cultures and mixed culture aquifer slurries. Appl Environ
Microbiol 57(10):29812985. https://doi.org/10.1128/aem.57.10.2981-2985.1991
Amakiri MA (1982) Microbial degradation of soil applied herbicides. Nij J Microbiol 2:1721
6 Recent Advancements in Mycoremediation 155
Anastasi EM, Wohlsen TD, Stratton HM, Katouli M (2013) Survival of Escherichia coli in two
sewage treatment plants using UV irradiation and chlorination for disinfection. Water Res 47
(17):66706679
Archana A, Jaitly AK (2015) Role of myco-communities in the eld of heavy metal remediation.
Biolife 3(1):77108
Arias-Estévez M, López-Periago E, Martínez-Carballo E, Simal-Gándara J, Mejuto JC, García-Río
L (2008) The mobility and degradation of pesticides in soils and the pollution of ground-water
resources. Agric Ecosyst Environ 123(4):247260
Balaguru P, Hariharan V, Manivel R, Trakroo M (2016) Measuring respiratory pressures with
mercury manometer in low economic health care settingsan analytical study. J Clin Diagnostic
Res 10:CC12
Bastos AC, Magan N (2009) Trametes versicolor: potential for atrazine bioremediation in calcar-
eous clay soil, under low water availability conditions. Int Biodeterior Biodegrad 63:389394
Bayramoglu G, Denizli A, Bektas S, Arica MY (2002) Entrapment of Lentinus sajor-cajuinto
Ca-alginate gel beads for removal of Cd (II) ions from aqueous solution: preparation and
bio-sorption kinetics analysis. Microchem J 72:6376
Bending MP, Anderron A, Ander P, Stenström J, Torstensson L (2001) Establishment of white-rot
fungus Phanerochaete chrysosporium on unsterile straw in solid substrate fermentation system
intended for degradation of pesticides. World J Microbiol Biotechnol 17:627633
Bending G, Friloux M, Walker A (2002) Degradation of contrasting pesticides by white rot fungi
and its relationship with ligninolytic potential. FEMS Microbiol Lett 212:5963
Bhatt P, Bhatt K, Sharma A, Zhang W, Mishra S, Chen S (2021a) Biotechnological basis of
microbial consortia for the removal of pesticides from the environment. Crit Rev Biotechnol
41(3):317338
Bhatt P, Joshi T, Bhatt K, Zhang W, Huang Y, Chen S (2021b) Binding interaction of glyphosate
oxidoreductase and C-P lyase: molecular docking and molecular dynamics simulation studies. J
Hazard Mater 5:409:124927
Bujacz B, Wieczorek P, Krzysko-lupicka T, Golab Z, Lejczak B, Kavfarski P (1995)
Organophosphonate utilization by the wild-type strain of Penicillium notatum. Appl Environ
Microbiol 61(8):29052910
Cheema SA, Khan MI, Tang X, Zhang C, Shen C, Malik Z, Ali S, Yang J, Shen K, Chen X (2009)
Enhancement of phenanthrene and pyrene degradation in rhizosphere of tall fescue (Festuca
arundinacea). J Hazard Mater 166:12261231
Choo J, Sabri NBM, Tan D, Mujahid A, Müller M (2015) Heavy metal resistant endophytic fungi
isolated from Nypa fruticans. Ocean Sci J 50:445453
Cruz CCV, da Costa ACA, Henriques CA, Luna AS (2004) Kinetic modeling and equilibrium
studies during cadmium biosorption by dead Sargassum sp. biomass. Bioresour Technol
91:249257
Cruz-Hernández A, Tomasini-Campocosio A, Pérez-Flores LJ, Fernández-Perrino FJ,
Gutiérrez-Rojas M (2013) Inoculation of seed-borne fungus in the rhizosphere of Festuca
arundinacea promotes hydrocarbon removal and pyrene accumulation in roots. Plant Soil
362:261270
Dash B, Sahu N, Singh AK, Gupta SB, Soni R (2021) Arsenic efux in Enterobacter cloacae RSN3
isolated from arsenic-rich soil. Folia Microbiol 66:189196
Debbarma P, Raghuwanshi S, Singh J, Suyal DC, Zaidi MGH, Goel R (2017) Comparative in situ
biodegradation studies of polyhydroxybutyrate lm composites. 3Biotech 7(178):19. https://
doi.org/10.1007/s13205-017-0789-3
Deng Z, Cao L, Huang H, Jiang X, Wang W, Shi Y, Zhang R (2011) Characterization of Cd-and
Pb-resistant fungal endophyte Mucor sp. CBRF59 isolated from rapes (Brassica chinensis)ina
metal-contaminated soil. J Hazard Mater 185:717724
Deng Q, Ramsköld D, Reinius B, Sandberg R (2014) Single-cell RNA-Seq reveals dynamic,
random monoallelic gene expression in mammalian cells. Science 343(193):193196
156 I. F. H. AI-Jawhari
Dhanasekar NN, Rahul G, Narayanan KB, Raman G, Sakthivel N (2015) Green chemistry approach
for the synthesis of gold nanoparticles using the fungus Alternaria sp. J Microbiol Biotechnol
25:11291135. https://doi.org/10.4014/jmb.1410.10036
Edwards CA (1986) In: Van Hofsten B, Eckstrom G (eds) Agrochemicals as
environmental-pollutants. In control of pesticide applications and residues in food. A guide
and directory. Swedish Science Press, Uppsala
EEA (European Environment Agency) (2003) Europes environment: the third assessment. State of
Environment report No 1/2003. Copenhagen
Elguetaa S, Santosa C, Limab N, Diezc MC (2016) Atrazine dissipation in a biobed system
inoculated with immobilized white-rot fungi. Arch Agron Soil Sci 62:14511461
FAO (Food and Agriculture Organization of the United Nations) (2009) How to feed the world in
2050. FAO, Rome. http://www.fao.org/leadmin/templates/wsfs/docs/expert_paper/How_to_
Feed_the_World_in_2050.pdf
Ferner DJ (2001) Toxicity, heavy metals. Med J 2:1
Fomina M, Charnock JM, Hillie S, Alvarez R, Gadd GM (2007) Fungal transformations of uranium
oxides. Environ Microbiol 9(7):16961710
Fourest E, Roux J-C (1992) Heavy metal biosorption by fungal mycelial by-products: mechanisms
and inuence of pH. Appl Microbiol Biotechnol 37:399403
Gan J, Koskinen WC (1998) Pesticide fate and behaviour in soil at elevated concentrations. In:
Kearney PC (ed) Pesticide remediation in soils and water. Wiley, Chichester, pp 5984
Gholami-Shabani M, Imani A, Shams-Ghahfarokhi M, Gholami-Shabani Z, Pazooki A,
Akbarzadeh A, Riazi G, Razzaghi-Abyaneh M (2016a) Bioinspired synthesis, characterization
and antifungal activity of enzyme-mediated gold nanoparticles using a fungal oxidoreductase. J
Iran Chem Soc 9:110. https://doi.org/10.1007/s13738-016-0923-x
Gholami-Shabani M, Shams-Ghahfarokhi M, Gholami-Shabani Z, Akbarzadeh A, Riazi G,
Razzaghi-Abyaneh M (2016b) Biogenic approach using sheep milk for the synthesis of plati-
num nanoparticles: the role of milk protein in platinum reduction and stabilization. Int J Nanosci
Nanotechnol 12:199206
Gholami-Shabani M, Shams-Ghahfarokhi M, Gholami-Shabani Z, Razaghi-abyaneh M (2016c)
Microbial enzymes: current features and potential applications in nanobiotechnology. In: Prasad
R (ed) Advances and applications through fungal nanobiotechnology. Springer, Heidelberg.
https://doi.org/10.1007/978-3-319-42990-8_5
Giri K, Rai JPN, Pandey S, Mishra G, Kumar R, Suyal DC (2017a) Performance evaluation of
isoproturon-degrading indigenous bacterial isolates in soil microcosm. Chem Ecol 33(9):817-
825. https://doi.org/10.1080/02757540.2017.1393535
Giri K, Suyal DC, Mishra G, Pandey S, Kumar R, Meena DK, Rai JPN (2017b) Biodegradation of
isoproturon by Bacillus pumilus K1 isolated from foothill agroecosystem of north west
Himalaya. Proc Natl Acad Sci India Sect B-Biol Sci 87(3):839848. https://doi.org/10.1007/
s40011-015-0667-x
Goel R, Zaidi MGH, Soni R, Kusumlata SYS (2008) Implication of Arthrobacter and Enterobacter
species for polycarbonate degradation. Int Biodeterior Biodegrad 61(2):167172
Graeme M (2005) Resistance management pesticide rotation. Ontario Ministry of Agriculture,
Food and Rural Affairs
Gupta P (2004) Pesticide exposure-Indian scene. J Dent Technol 198:118119
Hammel KE, Gai WZ, Green B, Moen MA (1992) Oxidative degradation of phenanthrene by the
ligninolytic fungus Phanerochaete chrysosporium. Appl Environ Microbiol 58:18321838
Haritash AK, Kaushik CP (2009) Biodegradation aspects of polycyclic aromatic hydrocarbons
(PAHs): a review. J Hazard Mater 169:115
Honary S, Barabadi H, Gharaei-Fathabad NF (2012) Green synthesis of copper oxide nanoparticles
using Penicillium aurantiogriseum,Penicillium citrinum and Penicillium waksmanii. Dig J
Nanomater Bios 7:9991005
6 Recent Advancements in Mycoremediation 157
Howarth RW (2006) Atmospheric deposition and nitrogen pollution in coastal marine ecosystems.
In: Visgilio GR, Whitelaw DM (eds) Acid in the environment: lessons learned and future
prospects. Springer, New York, pp 97116
Huang X-D, El-Alawi Y, Penrose DM, Glick BR, Greenberg BM (2004) A multi-process phytore-
mediation system for removal of polycyclic aromatic hydrocarbons from contaminated soils.
Environ Pollut 130:465476
IARC (1993) Beryllium, cadmium, mercury, and exposures in the glass manufacturing industry.
World Health Organization, International Agency for Research on Cancer. https://monographs.
iarc.fr/ENG/Monographs/vol58/mono58.pdf
Ilyasova D, Schwartz GG (2005) Cadmium and renal cancer. Toxicol Appl Pharmacol
207:179186
INECAR (2000) Institute of Environmental Conservation and Research. Position paper against
mining in Rapu-Rapu, Published by INECAR, Ateneo de Naga University, Philippines. www.
adnu.edu.ph/Institutes/Inecar/pospaper1.asp
Juhler R, Sorensen S, Larsen L (2001) Analysing transformation products of herbicide residues in
environmental samples. Water Res 35:13711378
Kadri T, Rouissi T, Brar SK, Cledon M, Sarma S, Verma M (2017) Biodegradation of polycyclic
aromatic hydrocarbons (PAHs) by fungal enzymes: a review. J Environ Sci 51:5274. https://
doi.org/10.1016/j.jes.2016.08.023
Kapaj S, Peterson H, Liber K, Bhattacharya P (2006) Human health effects from chronic arsenic
poisoninga review. J Environ Sci Heal Part A 41:23992428
Kavamura VN, Esposito E (2010) Biotechnological strategies applied to the decontamination of
soils polluted with heavy metals. Biotechnol Adv 28:6169
Kearney P, Wauchope R (1998) Disposal options based on properties of pesticides in soil and water.
In: Kearney P, Roberts T (eds) Pesticide remediation in soils and water, Wiley series in
agrochemicals and plant protection. Kluwer Academic, Dordrecht
Klimeka S, Marini L, Hofmann M, Isselstein J (2001) Additive partitioning of plant diversity with
respect to grassland management regime, fertilisation and abiotic factors. Basic Appl Ecol
9:626634
Kookana RS, Di HJ, Aylmore L (1998) Degradation rates of eight pesticides in surface and
subsurface soils under laboratory and eld conditions. Soil Sci 163:404411
Kour D, Kaur T, Devi R, Yadav A, Singh M et al (2021) Benecial microbiomes for bioremediation
of diverse contaminated environments for environmental sustainability: present status and future
challenges. Environ Sci Pollut Res 28:2491724939
Kratochvil D, Volesky B (1998) Advances in the biosorption of heavy metals. Trends Biotechnol
16:291300
Krzysko-Lupicka T, Stroff W, Kubs K, Skorupa M, Wieczorek P, Lejczak B, Kafarski P (1997) The
ability of soil borne fungi to degrade organophosphonate carbon-to-phosphorus bonds. Appl
Environ Microbiol 48:549552
Kumar P, Dash B, Suyal DC, Gupta SB, Singh AK, Chowdhury T, Soni R (2021) Characterization
of arsenic-resistant Klebsiella pneumoniae RnASA11 from contaminated soil and water samples
and its bioremediation potential. Curr Microbiol. https://doi.org/10.1007/s00284-021-02602-w
Kumar M, Bhatt G, Duffy CJ (2008) An efcient domain decomposition framework for accurate
representation of geodata in distributed hydrologic models. Int J Geogr Inf Sci 23(12):1569
1596
Lei A-P, Hu Z-L, Wong Y-S, Tam NF-Y (2007) Removal of uoranthene and pyrene by different
microalgal species. Bioresour Technol 98:273280
Lenntech Water Treatment (2004) Lenntech water treatment and air purication. Water Treatment,
Lenntech, Rotterdamseweg. www.excelwater.com/thp/lters/water-purication.htm
Li H-Y, Li D-W, He C-M, Zhou Z-P, Mei T, Xu H-M (2012a) Diversity and heavy metal tolerance
of endophytic fungi from six dominant plant species in a PbZn mine wasteland in China.
Fungal Ecol 5:309315
158 I. F. H. AI-Jawhari
Li H-Y, Wei D-Q, Shen M, Zhou Z-P (2012b) Endophytes and their role in phytoremediation.
Fungal Divers 54:1118
Li X, Li W, Chu L, White JF Jr, Xiong Z, Li H (2016) Diversity and heavy metal tolerance of endo-
phytic fungi from Dysphania ambrosioides, a hyperaccumulator from PbZn contaminated
soils. J Plant Interact 11:186192
Lipok J, Dombrovska L, Wieczorek P, Kafarski P (2003) The ability of fungi isolated from stored
carrot seeds to degrade organophosphonate herbicides. In: Del Re AAM, Capri E, Padovani L,
Trevisan M (eds) Pesticide in air, plant, soil and water system, proceeding of the XII symposium
pesticide chemistry. Piacenza
Liu YY, Xiong Y (2001) Purication and characterization of a dimethoate-degrading enzyme of
Aspergillus niger ZHY256 isolated from sewage. Appl Environ Microbiol 67:37463749
(Martens R (1976) Degradation of endosulfan by soil microorganisms. Appl Environ Microbiol
31:853858)
Loebenstein G, Thottappilly G (2007) Agricultural research management. Springer, Dordrecht MA
(Millennium Ecosystem Assessment) (2005) Ecosystem services and human well-being: wet-
lands and water synthesis. World Resources Institute, Washington, DC, 68 pp. Web site: http://
www.millenniumassessment.org/en/index.aspx)
Maliszewska-Kordybach B (1999) Sources, concentrations, fate and effects of polycyclic aromatic
hydrocarbons (PAHs) in the environment. Part a: PAHs in air. Polish J Environ Stud 8:131136
Mann H (1990) Biosorption of heavy metals by bacterial biomass. In: Volesky B (ed) Biosorption
of heavy metals. CRC Press, Boca Raton, FL, pp 93138
Maurya NS, Mital AK, Cornel P, Rother E (2006) Biosorption of dyes using dead macro-fungi:
effect of dye structure, ionic strength and pH. Bioresour Technol 97:512521
Mauti GO, Onguso J, Kowanga DK, Mauti EM (2016) Biodegradation activity of Aspergillus niger
lipase isolates from a tropical country garage. J Sci Innov Res 5(1):1518
Meena K, Sarita S (2017) Mycoremediation potential of Pleurotus species for heavy metals: a
review. Bioresour Bioprocess 4(32):19. https://doi.org/10.1186/s40643-017-0162-8
Michael DA, Solveig T, Chiara D, Xiao W, Shihan X, Mario AM, Wenyuan G, Segun GJ,
Lorenozo P (2020) Hydrocarbon degradation and enzyme activities of Aspergillus oryzae and
Mucor irregularis isolated from Nigerian crude oil-polluted sites. Micro 8(1912):119. https://
doi.org/10.3390/microorganisms8121912
Mishra A, Kumari M, Pandey S, Chaudhry V, Gupta KC, Nautiyal CS (2014) Biocatalytic and
antimicrobial activities of gold nanoparticles synthesized by Trichoderma sp. Bioresour
Technol 166:235242. https://doi.org/10.1016/j.biortech.2014.04.085
Mohsenzadeh F, Nasseri S, Mesdaghinia A, Nabizadeh R, Zafari D, Khodakaramian G, Chehregani
A (2010) Phytoremediation of petroleum-polluted soils: application of Polygonum aviculare
and its root-associated (penetrated) fungal strains for bioremediation of petroleum-polluted
soils. Ecotoxicol Environ Saf 73:613619
Mougin C, Laugero C, Asther M, Dubroca J, Frasse P, Asther M (1994) Biotransformation of the
herbicide atrazine by the white rot fungus Phanerochaete chrysosporium. Appl Environ
Microbiol 60:705708
Muraleedharan TR, Leela L, Venkobachar C (1991) Biosorption: an attractive alternative for metal
removal and recovery. Curr Sci 61:379385
Ndimele PE (2010) A review on the phytoremediation of petroleum hydrocarbon. Pak J Biol Sci
13:715
Nerud F, Baldrian J, Gabriel J, Ogbeifun D (2003) Nonenzymic degradation and decolorization of
recalcitrant compounds. In: Sasek V et al (eds) The utilization of bioremediation to reduce soil
contamination: problems and solutions. Kluwer Academic Publishers, Dordrecht, pp 2948
OECD (2012) Water quality and agriculture meeting the policy challenge. OECD studies on
water. OECD Publishing, Paris
Ogwuegbu MO, Ijioma MA (2003) Effects of certain heavy metals on the population due to mineral
exploitation. In: International conference on scientic and environmental issues. University of
Ado Ekiti, Ekiti State, pp 810
6 Recent Advancements in Mycoremediation 159
Ogwuegbu MOC, Muhanga W (2005) Investigation of lead concentration in the blood of people in
the Copperbelt Province of Zambia. J Environ 1:6667
Önder M, Ceyhan E, Kahraman A (2011) Effects of agricultural practices on environmental. In:
International conference on biology, environment and chemistry (ICBEC), vol 24 ©IACSIT
Press, Singapore
Prasad R (2016) Advances and applications through fungal nanobiotechnology. Springer, Cham
Rahman MM, Jusoh I, Husaini A, Seman IA, Sing NN (2014) Biodegradation and ligninolytic
enzymes proles of the newly synthesized organotin (IV)-treated non durable tropical wood
species. J Biochem Technol 5:743750
Ratnaike RN (2003) Acute and chronic arsenic toxicity. Postgrad Med J 79:391396
Rial-Otero R, Cancho-Grande B, Arias-Estévez M, López-Periago E, Simal-Gándara J (2003)
Procedure for the measurement of soil inputs of plant-protection agents washed off through
vineyard canopy by rainfalls. J Agric Food Chem 51(17):50415046
Rhodes A, Skea J, Hannon M (2014) The global surge in energy innovation. Energies 7(9):5601
5623. https://doi.org/10.3390/en7095601
Sandhu SS, Shakya M, Deshmukh L, Aharwal RP, Kumar S (2016) Determination of hydrocarbon
degrading potentiality of indigenous fungal isolates. Int J Environ Sci 6(6):11631172
Scott SL (2003) Biodegradability and toxicity of total petroleum hydrocarbon leachate from land
treatment units. M.S. California Polytechnic State University
Singh H (2006) Mycoremediation: fungal bioremediation. Wiley, Hoboken
Singh SK, Srivastava PK, Singh D, Han D, Gautam SK, Pandey AC (2015) Modeling groundwater
quality over a humid subtropical region using numerical indices, earth observation datasets, and
X-ray diffraction technique: a case study of Allahabad district, India. Environ Geochem Health
37(1):157180
Singh M, Singh D, Rai P, Suyal DC, Saurabh S, Soni R, Giri K, Yadav AN (2021) Fungi in
remediation of hazardous wastes: current status and future. In: Yadav AN (ed) Recent trends in
mycological research, fungal biology. Springer Nature, Cham
Soleimani M, Afyuni M, Hajabbasi MA, Nourbakhsh F, Sabzalian MR, Christensen JH (2010)
Phytoremediation of an aged petroleum contaminated soil using endophyte infected and
non-infected grasses. Chemosphere 81:10841090
Su C (2014) A review on heavy metal contamination in the soil worldwide: situation, impact and
remediation techniques. Environ Skept Critics 3:24
Surovtseva EG, Ivoilov VS, Belyaev SS (1997) Degradation of the aromatic fraction of oil by an
association of gram-positive and gram-negative bacteria. Microbiology 66:6569
Talaro KP, Talaro A (2002) Foundations in microbiology, 4th edn. McGraw Hill, New York
Ting FAN, Yunguo L, Baoying F, Guangming Z, Chunping Y, Ming Z, Haizhou Z, Zhenfeng T,
Xin W (2008) Biosorption of cadmium (II), zinc (II) and lead (II) by Penicillium
simplicissimum: isotherms, kinetics and thermodynamics. J Hazard Mater 160:655661
Udedi SS (2003) From Guinea worm scourge to metal toxicity in Ebonyi state. Chem Niger New
Millenn Unfold 2:1314
Vankar PS, Bajpai D (2008) Phyto-remediationof chrome-VI of tannery efuent by Trichoderma
species. Desalination 222:255262
Walls M (2006) Agriculture and environment. The standing committee on agricultural research
(SCAR) foresight group. 22 strani. http://ec.europa.eu/research/agriculture/scar/pdf/scar_
foresight_environment_en.pdf
Weyens N, van der Lelie D, Taghavi S, Newman L, Vangronsveld J (2009) Exploiting plant
microbe partnerships to improve biomass production and remediation. Trends Biotechnol
27:591598
Wunch KG, Alworth WL, Bennet JW (1999) Mineralization of benzo[a]pyrene by Marasmiellus
troyanus, a mushroom isolated from a toxic waste site. Microbiol Res 154:7579
Xiao X, Luo S, Zeng G, Wei W, Wan Y, Chen L, Guo H, Cao Z, Yang L, Chen J (2010) Biosorption
of cadmium by endophytic fungus (EF) Microsphaeropsis sp. LSE10 isolated from cadmium
hyperaccumulator Solanum nigrum L. Bioresour Technol 101:16681674
160 I. F. H. AI-Jawhari
Yang HB, Tan N, Wu FJ, Liu HJ, Sun M, She ZG, Lin YC (2012) Biosorption of uranium (VI) by a
mangrove endophytic fungus fusarium sp.# ZZF51 from the South China Sea. J Radioanal Nucl
Chem 292:10111016
Zboniska E, Lejczak B, Kafarski (1992) Organophosphonate utilization by the wild - type strain of
Pseudomonas uorescens. Appl Environ Microbiol 58(9):29932999
Zhang J, Chiao C (2002) Novel approaches for remediation of pesticide pollutants. Int Environ Pol
18:423433
Zhang D, Hui D, Luo Y, Zhou G (2008) Rates of litter decomposition in terrestrial ecosystems:
global patterns and controlling factors. J Plant Ecol 1(2):8593
Zhang JH, Xue QH, Gao H, Ma X, Wang P (2016) Degradation of crude oil by fungal enzyme
preparations from Aspergillus spp. for potential use in enhanced oil recovery. J Chem Technol
Biotechnol 91(4):865875
6 Recent Advancements in Mycoremediation 161
Article
Soil contamination is becoming a major concern due to the rapid urbanization and industrialization. The urgency to clean contaminated sites using biological methods becomes important. This paper presents for the first time the bioaugmentation effect of the fungal strain Absidia cylindrospora on a co-contaminated industrial soil. The tests were carried out in real industrial soil microcosms with varying incubation times. The study focuses on the evolution over time of the metals and PAHs content in the soil, as well as on the adsorption and/or accumulation of metals within the mycelium of Absidia cylindrospora. Even if metal contamination remained stable in the soil over 3 months, Absidia cylindrospora demonstrated its ability to simultaneously accumulate Cd, Co, Cu, Ni and Zn even in the presence of high concentrations of PAHs. The study revealed that the biosorption of Cr on the mycelium was stable during the test period whereas the bioaccumulation of the other metals (Cd, Co, Cu, Ni and Zn) within the mycelium increased with the aging of the mycelium. The ability of the fungal strain to accumulate metals appeared to correlate with the levels of the initial soil concentrations and their environmental availability, estimated by single HCl extraction. The effect of this strain on the dissipation of PAHs in the soil containing high concentrations of metals was more difficult to assess. An increase in PAH availability was first observed, measured by a concentration increase in the soil, followed by a dissipation trend only after 2 months.
Article
Full-text available
The objective of this study was to assess the response of the ligninolytic enzymes production during the biodegradation of organotin(IV) complexes-treated of Alstonia scholaris, Macaranga triloba and Hevea brasiliensis. The tropical wood species tested were treated respectively with different levels of monosubstituted organotin(IV) and disubstituted organotin(IV) complexes concentrations (0.1, 0.5 and 1%) and subjected to biodegradation by wood rotting fungi, Trametes versicolor and Gloeophyllum trabeum. Ligninolytic enzymes profiles of the biodegraded wood showed that manganese peroxidase is the highest enzyme produced and recorded as 26.72 U/mL of the untreated wood and 15.07 U/mL of organotin(IV) treated wood respectively, as compared to lignin peroxidase and laccase. Laccase activity was the least produced among them. Manganese peroxidase is highly expressed indicating that it is most likely to be the predominating enzyme that causing lignin degradation in the biodegraded A. scholaris, M. triloba and H. brasiliensis untreated and organotin(IV) complexes-treated woods. The ligninolytic enzymes activities of dibutyltin(IV)-treated wood were the least determined. Wood densities decreases with the increased in the percentage of weight loss indicating the rapid wood biodegradation occurred. Density reduction of monosubstituted organotin(IV) treated wood was found higher than disubstituted organotin(IV) treated wood. This study shows that the newly synthesized organotin(IV) complexes are effective on reducing the activities of ligninolytic enzyme that plays a vital role in the biodegradation of wood. Dibutyltin(IV) complex is found to affect the ligninolytic enzymes production and in turn gave the best protection to A. scholaris, M. triloba and H. brasiliensis against the decay fungi tested, T. versicolor and G. trabeum
Article
Full-text available
Rapid industrialization and intensive agriculture activities have led to a rise in heavy metal contamination all over the world. Chhattisgarh (India) being an industrial state, the soil and water are thickly contaminated with heavy metals, especially from arsenic (As). In the present study, we isolated 108 arsenic-resistant bacteria (both from soil and water) from different arsenic-contaminated industrial and mining sites of Chhattisgarh to explore the bacterial gene pool. Further, we screened 24 potential isolates out of 108 for their ability to tolerate a high level of arsenic. The sequencing of the 16S rRNA gene of bacterial isolates revealed that all these samples belong to different diverse genera including Bacillus, Enterobacter, Klebsiella, Pantoea, Acinetobacter, Cronobacter, Pseudomonas and Agrobacterium. The metal tolerance ability was determined by amplification of arsB (arsenite efflux gene) and arsC (arsenate reductase gene) from chromosomal DNA of isolated RnASA11, which was identified as Klebsiella pneumoniae through in silico analysis. The bacterial strains RpSWA2 and RnASA11 were found to tolerate 600 mM As (V) and 30 mM As (III) but the growth of strain RpSWA2 was slower than RnASA11. Furthermore, atomic absorption spectroscopy (AAS) of the sample obtained from bioremediation assay revealed that Klebsiella pneumoniae RnASA11 was able to reduce the arsenic concentration significantly in the presence of arsenate (44%) and arsenite (38.8%) as compared to control.
Article
Full-text available
Over the past few decades, the rapid development of agriculture and industries has resulted in contamination of the environment by diverse pollutants, including heavy metals, polychlorinated biphenyls, plastics, and various agrochemicals. Their presence in the environment is of great concern due to their toxicity and non-biodegradable nature. Their interaction with each other and coexistence in the environment greatly influence and threaten the ecological environment and human health. Furthermore, the presence of these pollutants affects the soil quality and fertility. Physicochemical techniques are used to remediate such environments, but they are less effective and demand high costs of operation. Bioremediation is an efficient, widespread, cost-effective, and eco-friendly cleanup tool. The use of microorganisms has received significant attention as an efficient biotechnological strategy to decontaminate the environment. Bioremediation through microorganisms appears to be an economically viable and efficient approach because it poses the lowest risk to the environment. This technique utilizes the metabolic potential of microorganisms to clean up contaminated environments. Many microbial genera have been known to be involved in bioremediation, including Alcaligenes, Arthrobacter, Aspergillus, Bacillus, Burkholderia, Mucor, Penicillium, Pseudomonas, Stenotrophomonas, Talaromyces, and Trichoderma. Archaea, including Natrialba and Haloferax, from extreme environments have also been reported as potent bioresources for biological remediation. Thus, utilizing microbes for managing environmental pollution is promising technology, and, in fact, the microbes provide a useful podium that can be used for an enhanced bioremediation model of diverse environmental pollutants.
Article
Full-text available
Widespread application of glyphosate poses a threat to living organisms. Microbial strains are able to degrade glyphosate via contrasting metabolic pathways with the help of enzymes. Glyphosate oxidoreductase (GOX) and C–P lyase are the key enzymes for the biodegradation of glyphosate and its intermediate metabolite aminomethylphosphonic acid (AMPA) in microbes. The microbial degradation of glyphosate has been reported, but the underlying molecular mechanism is still unclear. Therefore, in this study, the interaction mechanism of GOX and C–P lyase with glyphosate and AMPA were investigated by using molecular docking and molecular dynamics (MD) simulations. The results indicate that glyphosate contacts with the active site of GOX and C–P lyase by hydrogen bonds as well as hydrophobic and van der Waals interactions in aqueous solution to maintain its stability. The presence of glyphosate and AMPA in the active site significantly changes the conformation of GOX and C–P lyase. The results of the MD simulations confirm that GOX and C–P lyase complexes are stable during the catalytic reaction. This study offers a molecular level of understanding of the expression and function of GOX and C–P lyase for the bioremediation of glyphosate.
Article
Full-text available
Many free-living saprobic fungi are nature recruited organisms for the degradation of wastes, ranging from lignocellulose biomass to organic/inorganic chemicals, aided by their production of enzymes. In this study, fungal strains were isolated from contaminated crude-oil fields in Nigeria. The dominant fungi were selected from each site and identified as Aspergillus oryzae and Mucor irregularis based on morphological and molecular characterization, with site percentage incidences of 56.67% and 66.70%, respectively. Selected strains response/tolerance to complex hydrocarbon (used engine oil) was studied by growing them on Bushnell Haas (BH) mineral agar supplemented with the hydrocarbon at different concentrations, i.e., 5%, 10%, 15%, and 20%, with a control having dextrose. Hydrocarbon degradation potentials of these fungi were confirmed in BH broth culture filtrates pre-supplemented with 1% engine oil after 15 days of incubation using GC/MS. In addition, the presence of putative enzymes, laccase (Lac), manganese peroxidase (MnP), and lignin peroxidase (LiP) was confirmed in culture filtrates using appropriate substrates. The analyzed fungi grew in hydrocarbon supplemented medium with no other carbon source and exhibited 39.40% and 45.85% dose inhibition response (DIR) respectively at 20% hydrocarbon concentration. An enzyme activity test revealed that these two fungi produced more Lac than MnP and LiP. It was also observed through the GC/MS analyses that while A. oryzae acted on all hydrocarbon components in the used engine oil, M. irregularis only degraded the long-chain hydrocarbons and BTEX. This study confirms that A. oryzae and M. irregularis have the potential to be exploited in the bio-treatment and removal of hydrocarbons from polluted soils.
Article
Full-text available
Biodegradation is a cost effective and eco-friendly treatment for oil-contaminated materials by the use of microorganisms. The principal hydrocarbon degrading microorganisms are bacteria and fungi. Microorganisms can degrade oil and petroleum as an energy source and this may provide an enormous scope to remediate soils contaminated with petroleum and oil contents. The present study is an attempt to isolate and find out oil and hydrocarbon degrading fungi from oil and petroleum contaminated region of Jabalpur. Total 5 fungal strains were isolated; they had towering capability to degrade the hydrocarbon and oil. Those fungal isolates were Aspergillus sp., Popularia sp., Geotrichum sp., Periconia sp. and one isolate was unidentified among them. The biodegradation of hydrocarbons and oil was determined by using spectrophotometric and Diethyl ether analysis. Results were recorded in the form of biodegradation percentage and optical density of hydrocarbon. There are numerous problems dealing with petroleum contaminated soil and seawater, which can be easily resolved in favor of human health and natural environment. The present study and their results can give unique prospects in the field of bioremediation and biodegradation of petroleum contaminated soil and seawater.
Chapter
In the present changing scenario of climate change, the study of microbial communities along with plant–metal interaction is essentially useful to understand the survival of organisms, as heavy metal contamination of soil has led to deleterious effects on the survival of living organisms. As a result leading to ecological imbalance, some of the microorganisms have evolved themselves in the due course of time by facing metalliferous environments and have successfully adapted to the physiochemical changes of the soil caused due to heavy metal contamination by different sources like industries, waste disposal, agriculture, smelting, and mining. The increased level of heavy metals in the earth’s major environmental gradients is not congenial for the survival all organism including plants. Thus, microorganisms have modified themselves genetically and physically and in association with plants cause alterations in bioavailability of heavy metals known as phytoremediation. Changes in the evolution for plants and microorganisms are well established, but very little information has been available about the fungi in phytoremediation. Deciphering of microbial diversity is needed to provide more unified framework for understanding the concept of phytoremediation by fungi and predicting system-wide ecological responses to heavy metal contamination and its effect on the living beings. In view of this, the present chapter focuses on the plant–metal–microbe interaction. It also emphasizes on the adaptation of microbes by their genetic and physiochemical modification in the metalliferous environment. The outline of molecular and biochemical approaches is also discussed in this chapter.
Article
The application of microbial strains as axenic cultures has frequently been employed in a diverse range of sectors. In the natural environment, microbes exist as multispecies and perform better than monocultures. Cell signaling and communication pathways play a key role in engineering microbial consortia, because in a consortium, the microorganisms communicate via diffusible signal molecules. Mixed microbial cultures have gained little attention due to the lack of proper knowledge about their interactions with each other. Some ideas have been proposed to deal with and study various microbes when they live together as a community, for biotechnological application purposes. In natural environments, microbes can possess unique metabolic features. Therefore, microbial consortia divide the metabolic burden among strains in the group and robustly perform pesticide degradation. Synthetic microbial consortia can perform the desired functions at naturally contaminated sites. Therefore, in this article, special attention is paid to the microbial consortia and their function in the natural environment. This review comprehensively discusses the recent applications of microbial consortia in pesticide degradation and environmental bioremediation. Moreover, the future directions of synthetic consortia have been explored. The review also explores the future perspectives and new platforms for these approaches, besides highlighting the practical understanding of the scientific information behind consortia.
Article
In the present study, bacterial isolates were screened for arsenic resistance efficiency. Environmental isolates were isolated from arsenic-rich soil samples (i.e., from Rajnandgaon district of Chhattisgarh state, India). Amplification and sequencing of 16S rRNA gene revealed that the isolates were of Bacillus firmus RSN1, Brevibacterium senegalense RSN2, Enterobacter cloacae RSN3, Stenotrophomonas pavanii RSN6, Achromobacter mucicolens RSN7, and Ochrobactrum intermedium RSN10. Arsenite efflux gene (arsB) was successfully amplified in E. cloacae RSN3. Atomic absorption spectroscopy (AAS) analysis showed an absorption of 32.22% arsenic by the RSN3 strain. Furthermore, results of scanning electron microscopy (SEM) for morphological variations revealed an initial increase in the cell size at 1 mM sodium arsenate; however, it was decreased at 10 mM concentration in comparison to control. This change of the cell size in different metal concentrations was due to the uptake and expulsion of the metal from the cell, which also confirmed the arsenite efflux system.