ArticlePDF Available

The rarely occurring vaccine failure in sars-cove-2 vaccinee

Authors:
  • University of Qasim,College of Biotechnology
ISSN: 0005-2523
Volume 63, Issue 01, January, 2023
6735
THE RARELY OCCURING VACCINE FAILURE IN
SARS-COV-2 VACCINEES
ALI J ALKHAFAGY1, IBRAHIM M S SHNAWA2
Department of Anasthesia, Hilla University College, Babylon/IRAQ1
College of Biotechnology University of Qasim, And Hilla University College Babylon. IRAQ2
Keywords:
ABSTRACT
Breakthrough, covid-19, failure,
infection, pandemic, vaccine,
vaccinee.
Vaccine failure VF is a type of vaccine adverse effects VAE encountered
in human mass vaccination programs all over the world. VF originated
either from an inborn vaccine defects or due to defects in immune
responsiveness of human vaccinee and is expressed as breakthrough
infections including covid-19. The VF determination criteria were; I
reported by the en-charge interviewing physician in vaccination unit as
normal subject before vaccination, ii enrolled in fixed two doses
vaccination schedule iii vaccinee subject should be lived away from
excessive virus exposure areas and iv The onset of the infection 5-42
days or more after vaccination. Covid-19 pandemic is still circulating,
emergency approval of covid-19 vaccine versions are in use a year after
the start of the pandemic all over the world. Covid-19 vaccine failure
though it is rare but is being reportable all over the globe. The objective
of the present work was to report on covid -19 vaccine failure in
Babylon province Iraq. Mild, moderate, severe and critical infection
forms of the pulmonary patho-type of covid-19 were reported in an
observable ratio of 0.017 per thousand vaccinee. Severe and critical
forms were associated with co-morbidity and/or ageing. The reported
breakthrough found in Pfizer, Astrazinica and synopharm vaccine
makes.
This work is licensed under a Creative Commons Attribution Non-Commercial 4.0
International License.
1. Introduction
Vaccines of the infectious communicable agents including covid-19 are the non-pathogenic versions of the
original pathogen or their subunit pathogenicity associated immune-dominant epitopes. Vaccines can be
either; I - preventive applicable for mass vaccination programs pre-exposure or during pandemic spread, or
ii therapeutic for treatment of an individual cases [1]. The immune protective efficacy of any known
vaccine would not be in 100%. There are low limits for the approved vaccines to fail (break through
infection). Vaccine failure can be due to an inborn error in vaccine itself or due to defective host vaccinee
immune system function to the applied vaccine to overcome the burden of the infectious agent [1- 8]. VF
can happened after first or second covid-19 vaccine shots within 5-42 days or more in post-vaccination
period [3], [9]. The objective of the present work was to report on the rarely occurred covid-19 vaccine
A. J. ALKHAFAGY and I. M. S. SHNAWA, 2023 Azerbaijan Medical Journal
6736
failure.
2. MATERIALS AND METHODS
A special information case sheet was designed to match the covid-19 vaccine failure in this area. The
attendance patients of Mergan Teaching and ALSadik hospitals /Babylon to the period of Oct.2021 to
March 2022 were interviewed by special medical internist in these hospitals and the main author medical
internist among which 14 were vaccine failure covid-19 breakthrough infections. Patients consents were
made before application of the information sheets. Cough, fever, chest pain, shorten breath were the most
reportable symptoms 5 to 42 days post second vaccine shots. Clinical investigations were performed
including; I PCR for the virus RNA genes, ii D dimer, iii-CBC and iv- CT scan [10- 14].
3. RESULTS
3.1 Demography
The male-female ratio was 11:3(3.7: 1). The age range of the vaccinee patients were; 30-39= 1, 40-49 = 3,
50-59=3, 60-69 =5, 70-79= 1 and 80-90= 1. The clustering of the cases was around 50-90 years old. Half of
the patients were aged and one with arteriosclerosis comorbidity. The remaining were with no co-
morbidities.
3.2 Pre-vaccination Immune State
The routine followed by interviewing physicians within the vaccination programs including interviews for
the to be vaccinated subjects to prove that he or she was normal subject. Otherwise have co-morbidity. The
risk factors were ageing in seven cases and one arteriosclerosis case.
Figure 1. Pie diagram showing the pre-vaccination immune state.
3.3 Vaccine Version
Twelve of the fourteen cases were vaccinated with two shots of Pfizer, one with two shots of Asrazinica and
one with two shots of Synopharm versions.
3.4 Vaccine Coverage
The overall covid-19 vaccine coverage of Babylon province to the period of Dec.2021 to March 2022 was
808389 vaccine with full vaccine shots [15,16].
Aged
50%
Nocomorbid
ity
40%
Comorbidity
10%
ISSN: 0005-2523
Volume 63, Issue 01, January, 2023
6737
3.5 Vaccine Failure
The observable vaccine failure cases were 14 out of 808389 vaccinee. This stands as 0.017 per thousands of
vaccine. These expressed as breakthrough infections.
3.6 Breakthrough Infections
The complains of the patients were flu-like symptoms with fever, cough, chest pain and/or shortness of
breath. The investigations were showing; PCR positive for the virus RNA genes, D dimer levels ranges
from 550 to 11000, leukocytosis was up to 11000. Cell per/ul. CT scan confirming pathology were with
range of 20 to 90% Figure- 2. The onset of the post-vaccination infection was 14 days to six months. The
infection was of pulmonary mild, moderate severe and/or critical consistent with pulmonary covid-19
patho-type. The severe and critical cases were with aging and comorbidity. These cases were in both Pfizer
and synopharm makes of the vaccine, Table - 1.
Figure -2. Scattered diagram showing the CT scan covid-19 confirming pathology .X axis showed CT scan
and Y axis showed number of patients.
Table 1: Characteristics of The Breakthrough infected Covid-19 vaccinee.
Observations
11:3 (3.7: 1 )
1:14
3:14
3:14
5:14
1:14
1:14
6:14
7:14
1:14
808389 vaccinee in full vaccination
12:14
1 : 14
1 : 14
0
0.5
1
1.5
2
2.5
3
3.5
020 40 60 80 100
CT scan %
No of
Patients
A. J. ALKHAFAGY and I. M. S. SHNAWA, 2023 Azerbaijan Medical Journal
6738
14:14
510-11000
8000-1000 cell/ul.
2:14
3:14
1:14
3:14
1:14
3:14
1:14
3:14
3:14
8:14
12:14
2 : 14
4. DISCUSSION
Vaccine adverse effects VAE is one of the most vital areas of human vaccination programs. Covid-19
vaccines are not an exception to this theme. Covid-19 occupied the forefront area in the current vaccination
research. It broadly categorized into simple and complex. The complex VAE type can be ramified into
vaccine enhancement of the disease VAED and Vaccine failure [1- 8]. The present work was aimed at
tracing the observable vaccine failure cases among vaccinee during post-vaccination period. The followed
criteria for identification of breakthrough infection were in covid-19 full vaccinee were; i- the reviewing en-
charge physician reported that the to be vaccinated subject was normal before vaccination, ii-the
interviewed subject enrolled in fixed vaccination schedule of two doses, a month apart between them, iii-
the onset of the infection happened 14 to 42 days or more after vaccination and iv the vaccinee subject
live in an area away from virus exposure niche [2], [9]. The notable signs and symptoms of the ill vaccinee
subjects were consistent with the pulmonary pathotype of covid-9 [18]. The infection course was spanning
between mild, moderate, severe and critical [19], [20]. The noted breakthrough infections, Table 1 were
grouped in accordance with National Institute of health grading of covid-19 spectrum [21] and to mild-
moderate group A as well as severe-critical group B [22], Table 2;
Spectrum of Severity
NIH[ 21]
[22]
Mild
3:14
Mild-Moderate 6:14
Moderate
3:14
Severe-Critical 8:14
Severe-Critical
8:14
Severe and critical cases were associated with ageing whereby CT scan covid-19 confirming pathology was
rated from 60 to 90 % in an age range of 50 to 79 years old. Though exception was noted to this finding,
that young vaccinee reported 90% and aged of 90 years old reported lower 20 % pathology. The
breakthrough infected vaccinee prognosis was 12 survivors and two deceased (The critical cases), Tables 1
& 2 [21- 29]. The observable vaccine failure cases were rated as 0.017 per thousand of vaccinee a
proportion that seemed to be low as compared to that reported abroad, Table 3 [9], [21- 29]. This can be
an impact of underreporting due to those infected vaccine whom sneaking out reporting by managing to
cure in the special respiratory disease clinics. A situation being an familiar in abroad clinical practice. In
comparison, the high reported vaccine failure ratios per thousand in UK, USA, Italy and India [9], [21- 29],
attributed to most of studied populations were either health care workers [22], or those with underlying
ISSN: 0005-2523
Volume 63, Issue 01, January, 2023
6739
comorbidities [24].
Table -3: Global Covid-19 vaccine failure(Breakthrough infections)Reports.
Area
Vaccine Failure per thousand
vaccines
References
United Kingdome
54
[21]
United Kingdome
26
[22]
Unite States of America
23.11(Comorbidity)
[24]
United States of America
5
[9]
India
12
[28]
India
93.7
[29]
IRAQ/Babylon
0.017(observable)
This study
5. CONCLUSIONS
The observable vaccine failure in this area is rare as it accounts for 0.017 per thousand vaccinee. VF was
reported among vaccinee with Pfizer, Asrazinica and synopharm vaccine makes. The breakthrough
infection form was of pulmonary patho-types. The infection severity spectrum was spanning between; mild,
moderate, severe and critical. Severe and critical cases were noted mainly among aged vaccinee.
6. REFERENCES
[1] Shnawa IMS 2019.Vaccine Technology At Glance. Boffin Access, UK.
[2] Fragkou PC, Dimopoulou D 2021.Serious complications of covid-19 vaccines; A mini-review.
Metabolism Open 12:100145.
[3] Crawford N Lewis G 2021.Vaccine associated enhanced disease. Melbourne Vaccine Education Centre
,A pamphlet.
[4] Zellweger R M, wartel A, Mark F et al.2020.Vaccination against sars-cov-2 and disease enhancement,
Known and Unknowns, Expert Review of Vaccines 19(8):691-698.
[5] Beaty AL, Peyser ND, Butcher XE et al.2021.Analysis of covid-19 vaccine types and adverse effects
following vaccination. JAMA Network 4(12):e2140364.doi.1001/jama network open.2021.40354.
[6] Antonili M,Benfold RS, Merino J et al.2022.Risk factors and disease profile of post-vaccination sars-
cov-2 infection in UK users of covid vaccines .Study app; community based,nested case control
study.Lancet 22:43-55.
[7] Canas LSC,Osterddahl MF,Deng J et al.Distanggilling post-vaccination symptoms from early covid-
19.EClinical Medicine 42 :2589,101212.
[8] Kelleni M 2021.Sars-cov-2 vaccination, autoimmunity, antibody dependent covid-19 enhancement and
other potential risk beneath the tip of the iceberg. Int. Pul. Resp. Sci.
5(2):55658.10.19080/ihoprs.2021.555658.
[9] Butt A A , Yan P , Shaikh OS et al.2022.Rate and Risk factors for severe/critical disease among fully
vaccinated persons with breakthrough severe acute respiratory coronavirus 2 infection in high risk national
population.Clin.Infect.Dis.75(1):e849-856.
A. J. ALKHAFAGY and I. M. S. SHNAWA, 2023 Azerbaijan Medical Journal
6740
[10] Stevens CD 2010.Clinical Immunology and Serology; A Laboratory Perspective.3 rd ed.F A Davis
Company Philadelphia,202-216.
[11] European Centre for Disease Prevention and Control. Re-infection with Covid-19,consideration for
Public Health Response:ECDC 2020.
[12] Shnawa IMS, ALFatlawi R H ,ALNeama AH,Abd A 2022. Determination role of some biomarkers
tests for severe sars-cov-2 infection in Babylon Province/IRAQ. Mat.Today.Proc.61:686-689.
[13] Machnicki S Patel D, Singh A et al.2021.The usefulness of chest CT imaging in patients suspected or
diagnosed covid-19.Chest 162(2):652-670.
[14] Saeed GA, Gaba W, Shah A et al. 2021.Correlation between Chest CT severity score and the clinical
parameters of adult patients with covid-19 pneumonia.Radiol.Res.Pract. ID:6607677,7 pages.
[15] International covid-19 vaccine coverage, Our World in data,2022.Iraqi coverage.
[16] Babylon Local Covi-19 Vaccine Coverage,Babylon Board of Health-Babylon province Iraq.
[17] Pluddemann A, Aronson JK 2020.What is the T cell in covid-19 infection? Why Immunity in about
more than antibodies. Oxford covid-19 Evidence based Service Team.University of Oxford.
[18] Sudre HC et al. 2020.Symptom clusters in covid-19 : A potential clinical prediction tool,covid
symptom study app.medRxiv.doi.org./1101/2020.06.19.20129056.
[19] Covi-19 Treatment Guidelines Panel. Coronavirus disease -19(Covid-19) Treatment Guidelines.
National Institutes of Health. Available at( http://www.covid-19treatmentguidelines.nih.gov.).
[20] Zayed N E , Abbas A , Lutfy S M .2022.Criteria and potential predictors of severity in patients with
covid-19.Egy.J.Brochol.16:11
[21] Taquet M ,Dereon Q ,Lustig Y et al.2022.Six months sequelae of post vaccination sars-cov-2
infection; A retro-spective cohort study of 10,024 breakthrough infections.medRxiv a licensed to display
the preprint.
[22] Bergwerk M , Gonen T ,Lustig Y . et al.2022.Covid-19.Breakthrough infections in vaccinated health
care workers.N.Eng.J.Med.385:1474-1484.
[23] Penetra SLS , da Silva MFB, Resende P et al.2022.Post-acute covid-19 syndrome re-infection and
vaccine breakthrough by sars-cov-2 gamma varint in Brazil.Int.J.Infect. Dis.114:58-61.
[24] Singh J , Singh N ,Anzalone A et al.2021.Breakthrough covid-19 infections post vaccination among
immune-compromized patients with autoimmune or inflammatory rheumatic diseases ;A retrospective
cohort analysis from US nationally sample electronic medical record data repository .ACR convergence
meeting.Oct.22.2021.
[25] Ke R , Martnez PP ,Smith R L. et al.2022.Longtudinal analysis of sars-cov-2 vaccine breakthrough
ISSN: 0005-2523
Volume 63, Issue 01, January, 2023
6741
infections reveals limited infectious shedding and restricted tissue distribution. Open Forum Infectious
Disease 9(7): article number ,ofac192.
[26] Williams E ,Colson J , Valiathan R et al.2022.permissive omicron breakthrough infections with
binding or neutralizing antibodies to ancestral sars-cov-2.Vaccine 40:5868-5872.
[27] Rovida F , Cassaniti I ,Paolucci S et al.2021.Sars-cov-2 vaccine breakthrough infections with the alpha
variant are asymptomatic among health care workers. Nature communications. 12;6032
[28] Ali SA, Bhattacharyya S Ahmed FN et al 2022.Covid-19 infection breakthrough post-vaccination;
Systematic review.Pharm.Bioall.Sci.14:S196-199.
[29] Rishi S, Guzlar B, Farhana A et al.2022.Omicron breakthrough infections in fully vaccinated
individuals during omicron wave in Kashmir, India and current regional scenario.J. Positive
Schol.Psychol.6(3):5132-5136.
ResearchGate has not been able to resolve any citations for this publication.
Article
Full-text available
Background Breakthrough infection with the severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) Omicron variant (B.1.1.529) has occurred in populations with high vaccination rates. Methods In a longitudinal cohort study, pre-breakthrough infection sera for Omicron breakthroughs (n=12) were analyzed. Assays utilized include a laboratory-developed solid phase binding assay to recombinant spike protein, a commercial assay to the S1 domain of the spike protein calibrated to the World Health Organization (WHO) standard, and a commercial solid-phase surrogate neutralizing activity (SNA) assay. All assays employed spike protein preparations based on sequences from the Wuhan-Hu-1 strain. Results Pre-breakthrough binding antibody titers ranged from 1:800-1:51,200 for the laboratory-developed binding assay, which correlated well and agreed quantitatively with the commercial spike S1 domain WHO calibrated assay. SNA was detected in 10/12 (83%) samples. Conclusions Neither high binding titers nor SNA were markers of protection from Omicron infection/re-infection.
Article
Full-text available
It explained the laboratory investigation battery helpful for diagnoses of severe human sars-cov-2 infections at Babylon Province?Iraq.
Article
Full-text available
Background The challenge in treating severe COVID-19 in the absence of targeted medication is enforcing physicians to search carefully for clinical predictors of severity. Aim To define the profile of patients at risk of severe COVID-19 and to assess for certain predictors. Methods Confirmed COVID-19 cases were classified into the following: group A: mild/moderate cases and group B: severe/critical cases according to the selected criteria. History, radiological assessment, complete blood count, lactate dehydrogenase (LDH), myocardial enzymes, serum ferritin, and D dimer were assessed. Patients were followed for the need of ICU and mechanical ventilation. Duration till conversion, length of stay, and mortality were recorded. Results A total of 202 patients were analyzed. Group B had higher age (53.2 ± 12.6 vs 40.3 ± 10.3, P < 0.001), more prevalence of DM (60.61% vs 16.57% P < 0.001), hypertension (51.52% vs 20.12%, P < 0.001), ischemic heart (27.27% vs 3.55%, P < 0.001), bronchial asthma (36.36% vs 3.55%, P < 0.001), COPD (9.09% vs 1.18%, P = 0.03), higher mean platelet volume (MPV) (12.76 ± 7.13 vs 10.51 ± 7.78 (fL), P < 0.001), higher serum ferritin (954 ± 138 vs 447 ± 166 ng/ml, P < 0.001), higher LDH (604 ± 220 vs 384 ± 183 U/L, P -value < 0.001), higher creatine phosphokinase (24.27 ± 5.82 vs 16.4 ± 4.87 IU/L, P < 0.001), and higher mortality (30.3% vs 0.6%, P < 0.001). Multivariate regression of predictors of severity identified three predictors; age, MPV, serum ferritin, and IHD. Conclusions The current study places of interest the characteristic host-related features of severe COVID-19 and draws attention to potential predictors.
Article
Full-text available
We describe a case of prolonged COVID-19 caused by the SARS-CoV-2 Gamma variant in a fully vaccinated healthcare worker, 387 days after an infection caused by lineage B.1.1.33. Infections were confirmed by whole-genome sequencing and corroborated by the detection of neutralizing antibodies in convalescent serum samples. Considering the permanent exposure of this healthcare worker to SARS-CoV-2, the waning immunity after the first infection, the low efficacy of the inactivated vaccine at preventing COVID-19, the immune escape of the Gamma variant (VOC), and the burden of post-COVID syndrome, this individual would have benefited from an additional dose of a heterologous vaccine.
Article
Full-text available
Vaccine breakthrough SARS-CoV-2 infection has been monitored in 3720 healthcare workers receiving 2 doses of BNT162b2. SARS-CoV-2 infection is detected in 33 subjects, with a 100-day cumulative incidence of 0.93%. Vaccine protection against acquisition of SARS-CoV-2 infection is 83% (95%CI: 58–93%) in the overall population and 93% (95%CI: 69-99%) in SARS-CoV-2-experienced subjects, when compared with a non-vaccinated control group from the same Institution, in which SARS-CoV-2 infection occurs in 20/346 subjects (100-day cumulative incidence: 5.78%). The infection is symptomatic in 16 (48%) vaccinated subjects vs 17 (85%) controls (p = 0.01). All analyzed patients, in whom the amount of viral RNA was sufficient for genome sequencing, results infected by the alpha variant. Antibody and T-cell responses are not reduced in subjects with breakthrough infection. Evidence of virus transmission, determined by contact tracing, is observed in two (6.1%) cases. This real-world data support the protective effect of BNT162b2 vaccine. A triple antigenic exposure, such as two-dose vaccine schedule in experienced subjects, may confer a higher protection.
Article
Full-text available
Background Despite the high efficacy of the BNT162b2 messenger RNA vaccine against severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2), rare breakthrough infections have been reported, including infections among health care workers. Data are needed to characterize these infections and define correlates of breakthrough and infectivity. Methods At the largest medical center in Israel, we identified breakthrough infections by performing extensive evaluations of health care workers who were symptomatic (including mild symptoms) or had known infection exposure. These evaluations included epidemiologic investigations, repeat reverse-transcriptase–polymerase-chain-reaction (RT-PCR) assays, antigen-detecting rapid diagnostic testing (Ag-RDT), serologic assays, and genomic sequencing. Correlates of breakthrough infection were assessed in a case–control analysis. We matched patients with breakthrough infection who had antibody titers obtained within a week before SARS-CoV-2 detection (peri-infection period) with four to five uninfected controls and used generalized estimating equations to predict the geometric mean titers among cases and controls and the ratio between the titers in the two groups. We also assessed the correlation between neutralizing antibody titers and N gene cycle threshold (Ct) values with respect to infectivity. Results Among 1497 fully vaccinated health care workers for whom RT-PCR data were available, 39 SARS-CoV-2 breakthrough infections were documented. Neutralizing antibody titers in case patients during the peri-infection period were lower than those in matched uninfected controls (case-to-control ratio, 0.361; 95% confidence interval, 0.165 to 0.787). Higher peri-infection neutralizing antibody titers were associated with lower infectivity (higher Ct values). Most breakthrough cases were mild or asymptomatic, although 19% had persistent symptoms (>6 weeks). The B.1.1.7 (alpha) variant was found in 85% of samples tested. A total of 74% of case patients had a high viral load (Ct value, <30) at some point during their infection; however, of these patients, only 17 (59%) had a positive result on concurrent Ag-RDT. No secondary infections were documented. Conclusions Among fully vaccinated health care workers, the occurrence of breakthrough infections with SARS-CoV-2 was correlated with neutralizing antibody titers during the peri-infection period. Most breakthrough infections were mild or asymptomatic, although persistent symptoms did occur.
Article
Full-text available
As no one symptom can predict disease severity or the need for dedicated medical support in coronavirus disease 2019 (COVID-19), we asked whether documenting symptom time series over the first few days informs outcome. Unsupervised time series clustering over symptom presentation was performed on data collected from a training dataset of completed cases enlisted early from the COVID Symptom Study Smartphone application, yielding six distinct symptom presentations. Clustering was validated on an independent replication dataset between 1 and 28 May 2020. Using the first 5 days of symptom logging, the ROC-AUC (receiver operating characteristic – area under the curve) of need for respiratory support was 78.8%, substantially outperforming personal characteristics alone (ROC-AUC 69.5%). Such an approach could be used to monitor at-risk patients and predict medical resource requirements days before they are required.
Article
Full-text available
Purpose: Our aim is to correlate the clinical condition of patients with COVID-19 infection with the 25-point CT severity score by Chang et al. (devised for assessment of ARDS in patients with SARS in 2005). Materials and methods: Data of consecutive symptomatic patients who were suspected to have COVID-19 infection and presented to our hospital were collected from March to April 2020. All patients underwent two consecutive RT-PCR tests and had a noncontrast HRCT scan done at presentation. From the original cohort of 1062 patients, 160 patients were excluded leaving a total number of 902 patients. Results: The mean age was 44.2 ± 11.9 years (85.3% males, 14.7% females). CT severity score was found to be positively correlated with lymphopenia, increased serum CRP, d-dimer, and ferritin levels (p < 0.0001). The oxygen requirements and length of hospital stay were increasing with the increase in scan severity. Conclusion: The 25-point CT severity score correlates well with the COVID-19 clinical severity. Our data suggest that chest CT scoring system can aid in predicting COVID-19 disease outcome and significantly correlates with lab tests and oxygen requirements.
  • C D Stevens
Stevens CD 2010.Clinical Immunology and Serology; A Laboratory Perspective.3 rd ed.F A Davis Company Philadelphia,202-216.
The usefulness of chest CT imaging in patients suspected or diagnosed covid-19
  • D Machnicki S Patel
  • A Singh
Machnicki S Patel D, Singh A et al.2021.The usefulness of chest CT imaging in patients suspected or diagnosed covid-19.Chest 162(2):652-670.