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The phytoalexin camalexin and indolic glucosinolates share not only a common evolutionary origin and a tightly interconnected biosynthetic pathway, but regulatory proteins controlling the shared enzymatic steps are also modulated by the same R2R3-MYB transcription factors. The indolic phytoalexin camalexin is a crucial defense metabolite in the model plant Arabidopsis. Indolic phytoalexins and glucosinolates appear to have a common evolutionary origin and are interconnected on the biosynthetic level: a key intermediate in the biosynthesis of camalexin, indole-3-acetaldoxime (IAOx), is also required for the biosynthesis of indolic glucosinolates and is under tight control by the transcription factors MYB34, MYB51, and MYB122. The abundance of camalexin was strongly reduced in myb34/51 and myb51/122 double and in triple myb mutant, suggesting that these transcription factors are important in camalexin biosynthesis. Furthermore, expression of MYB51 and MYB122 was significantly increased by biotic and abiotic camalexin-inducing agents. Feeding of the triple myb34/51/122 mutant with IAOx or indole-3-acetonitrile largely restored camalexin biosynthesis. Conversely, tryptophan could not complement the low camalexin phenotype of this mutant, which supports a role for the three MYB factors in camalexin biosynthesis upstream of IAOx. Consistently expression of the camalexin biosynthesis genes CYP71B15/PAD3 and CYP71A13 was not negatively affected in the triple myb mutant and the MYBs could not activate pCYP71B15::uidA expression in trans-activation assays with cultured Arabidopsis cells. In conclusion, this study reveals the importance of MYB factors regulating the generation of IAOx as precursor of camalexin.
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ORIGINAL RESEARCH
published: 25 August 2015
doi: 10.3389/fpls.2015.00654
Edited by:
Ute Roessner,
The University of Melbourne, Australia
Reviewed by:
Brian Traw,
University of Pittsburgh, USA
Fumiya Kurosaki,
University of Toyama, Japan
*Correspondence:
Tamara Gigolashvili,
Botanical Institute and Cluster of
Excellence on Plant Sciences,
University of Cologne,
BioCenter, D-50674 Cologne,
Germany
t.gigolashvili@uni-koeln.de
Specialty section:
This article was submitted to
Plant Metabolism
and Chemodiversity,
a section of the journal
Frontiers in Plant Science
Received: 15 June 2015
Accepted: 07 August 2015
Published: 25 August 2015
Citation:
Frerigmann H, Glawischnig E
and Gigolashvili T (2015) The role
of MYB34, MYB51 and MYB122
in the regulation of cam alexin
biosynthesis in Arabidopsis thaliana.
Front. Plant Sci. 6:654.
doi: 10.3389/fpls.2015.00654
The role of MYB34, MYB51 and
MYB122 in the regulation of
camalexin biosynthesis in
Arabidopsis thaliana
Henning Frerigmann1, Erich Glawischnig2and Tamara Gigolashvili1*
1Botanical Institute and Cluster of Excellence on Plant Sciences, University of Cologne, Cologne, Germany, 2Lehrstuhl für
Genetik, Technische Universität München, Freising, Germany
The phytoalexin camalexin and indolic glucosinolates share not only a common
evolutionary origin and a tightly interconnected biosynthetic pathway, but regulatory
proteins controlling the shared enzymatic steps are also modulated by the same
R2R3-MYB transcription factors. The indolic phytoalexin camalexin is a crucial defense
metabolite in the model plant Arabidopsis. Indolic phytoalexins and glucosinolates
appear to have a common evolutionary origin and are interconnected on the biosynthetic
level: a key intermediate in the biosynthesis of camalexin, indole-3-acetaldoxime (IAOx),
is also required for the biosynthesis of indolic glucosinolates and is under tight control by
the transcription factors MYB34, MYB51, and MYB122. The abundance of camalexin
was strongly reduced in myb34/51 and myb51/122 double and in triple myb mutant,
suggesting that these transcription factors are important in camalexin biosynthesis.
Furthermore, expression of MYB51 and MYB122 was significantly increased by biotic
and abiotic camalexin-inducing agents. Feeding of the triple myb34/51/122 mutant
with IAOx or indole-3-acetonitrile largely restored camalexin biosynthesis. Conversely,
tryptophan could not complement the low camalexin phenotype of this mutant, which
supports a role for the three MYB factors in camalexin biosynthesis upstream of
IAOx. Consistently expression of the camalexin biosynthesis genes CYP71B15/PAD3
and CYP71A13 was not negatively affected in the triple myb mutant and the MYBs
could not activate pCYP71B15::uidA expression in trans-activation assays with cultured
Arabidopsis cells. In conclusion, this study reveals the importance of MYB factors
regulating the generation of IAOx as precursor of camalexin.
Keywords: camalexin biosynthesis, transcriptional regulation, MYB51, MYB122, MYB34
Introduction
Phytoalexins are important defense compounds produced by plants in response to infection by
a large variety of microorganisms. However, the elucidation of camalexin biosynthesis benefited
from the fact that abiotic elicitors like silver nitrate (AgNO3;Glawischnig et al., 2004)andUV
(Müller et al., 2015) strongly induce the camalexin production. Camalexin (3-thiazol-2-yl-indole)
is an indole alkaloid phytoalexin that is specific to a group of cruciferous species including the
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Frerigmann et al. Regulation of camalexin biosynthesis by MYBs
model plant Arabidopsis thaliana, but is absent in more distantly
related Brassicaceae species (Glawischnig, 2007;Rauhut and
Glawischnig, 2009;Bednarek et al., 2011). The induction of
camalexin biosynthesis genes is strictly localized to sites of
pathogen application, as demonstrated by quantitative RT-PCR
and reporter-gene analysis and there is no evidence existing
for long-distance camalexin transport (Schuhegger et al., 2007).
During camalexin biosynthesis, tryptophan (Trp) is converted to
indole-3-acetaldoxime (IAOx; Figure 1). This step is shared with
the biosynthesis of other Trp-derived metabolites andis catalyzed
by two homologous cytochrome P450 enzymes, CYP79B2, and
CYP79B3 (Hull et al., 2000;Mikkelsen et al., 2000;Zhao et al.,
2002). The resulting IAOx is a precursor of camalexin, indolic
glucosinolates (IGs) and indole-carboxylic acids (ICAs; Böttcher
FIGURE 1 | Regulation by MYB transcription factors in the camalexin biosynthesis pathway. Proven positive transcriptional regulation is shown by dotted
lines with arrows. Modified from Böttcher et al. (2009), Geu-Flores et al. (2011), and Müller et al. (2015); indolic glucosinolates (IG); glutathione (GSH);
dihydrocamalexic acid (DHCA).
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Frerigmann et al. Regulation of camalexin biosynthesis by MYBs
et al., 2014). In camalexin biosynthesis, IAOx is dehydrated
to indole-3-acetonitrile (IAN) by CYP71A12 and CYP71A13
(Figure 1;Müller et al., 2015). In accordance with their specific
function in phytoalexin biosynthesis, both corresponding genes
are expressed at very low levels in the absence of stress and
are induced by pathogen infection, application of pathogen-
associated molecular patterns (PAMPs), or by AgNO3(Nafisi
et al., 2007;Millet et al., 2010). IAN is also generated during
the degradation of glucobrassicin (I3M; Burow et al., 2008)
and it can be converted to indole-3-carbaldehyde (ICHO) and
ICA by CYP71B6 (Böttcher et al., 2014)(Figure 1). Under
specific conditions IAN serves also as a precursor for IAA
(Kutz et al., 2002;Park et al., 2003). However, the IAN pools
seem to be strictly seperated, thus IAN from I3M breakdown
cannot serve as a precursor of camalexin, but only for ICAs,
as it was shown with a TALEN generated cyp71A12 cyp71a13
double knockout (Müller et al., 2015). Notably, the cyp79b2/b3
double knockout mutant cannot synthesize camalexin (Zhao
et al., 2002;Glawischnig et al., 2004), but this ability was recovered
in a chemical complementation strategy by feeding the mutant
with camalexin precursors such as IAN and dihydrocamalexic
acid (DHCA; Schuhegger et al., 2006;Nafisi et al., 2007;Böttcher
et al., 2009). In camalexin biosynthesis IAN is conjugated with
glutathione (Nafisi et al., 2007;Parisy et al., 2007;Böttcher et al.,
2009;Su et al., 2011). From this glutathione conjugate (GS-IAN)
a cysteine conjugate Cys(IAN) is formed, involving γ-Glutamyl
Peptidases 1 and 3 (GGP1/3; Geu-Flores et al., 2011), which is
the substrate for CYP71B15/PAD3 (Zhou et al., 1999;Schuhegger
et al., 2006;Böttcher et al., 2009).
Although the pathway leading to camalexin has been
largely elucidated, its regulation remains less well understood.
Perception of fungal pathogens such as Botrytis cinerea
(Kliebenstein et al., 2005)andAlternaria alternata (Schuhegger
et al., 2007) significantly activates camalexin production via
mitogen-activated protein kinase (MAPK) cascade, which in
turn phosphorylates MPK3 and MPK6 (Ren et al., 2008).
Camalexin synthesis is almost completely blocked in the mpk3/6
double mutant after infection by B. cinerea (Ren et al., 2008).
Mao et al. (2011) have demonstrated that the Arabidopsis
transcription factor WRKY33 is a molecular target of the
MPK3/6 cascade. wrky33 mutant can synthesize only very low
amounts of camalexin, even in the MPK3/6 gain-of-function
mutant. Furthermore, MPK4 physically interacts with MPK4
SUBSTRATE 1 (MKS1) and WRKY33 and represses WRKY33
function. Activated MPK4 phosphorylates MKS1, which in
turn, releases WRKY33, which can then bind to the promoter
of CYP71B15 (Qiu et al., 2008). Surprisingly, the respective
wrky33 knock-out mutant contains low camalexin levels only
at early stages of infection, but at later stages, contains even
more camalexin than wild-type (WT) plants (Birkenbihl et al.,
2012). Together, these results indicate that WRKY33 is one
important regulator of camalexin, but that other regulators
exist.
The transcription of NAC042 is strongly induced by AgNO3,
a known inducer of camalexin biosynthesis, and the nac042
null mutant accumulates about 50% of WT camalexin levels
after treatment with AgNO3or B. cinerea (Saga et al.,
2012). Furthermore, the induction of camalexin biosynthesis
by acifluorfen, which generates reactive oxygen species (ROS),
results in about 15% of the WT camalexin level in nac042,
which highlights the key role of NAC042 in the ROS-
dependent induction of camalexin biosynthesis (Saga et al.,
2012).
To synthesize camalexin, it is essential that the specific
genes (CYP71A12,CYP71A13,andCYP71B15) are upregulated
together with the upstream Trp biosynthetic genes and CYP79B2.
The known regulator of camalexin, WRKY33, binds to the
promoters of CYP71B15 and CYP71A13 (Birkenbihl et al.,
2012), whereas the regulators of IG biosynthesis, MYB34,
MYB51, and MYB122 control genes of the shikimate pathway
to Trp, i.e., anthranilate synthase αand βsubunits, Trp
synthases and CYP79B2 (Gigolashvili et al., 2007;Malitsky
et al., 2008;Frerigmann and Gigolashvili, 2014). These MYB
transcription factors thus positively regulate all the necessary
steps for the production of the camalexin precursor IAOx. In
addition to this intermediate, IG and camalexin biosynthesis
share a glutathione conjugation step and the involvement
of GGP1 (Geu-Flores et al., 2011), reflecting that camalexin
biosynthesis likely has evolved from IG biosynthesis (Rauhut
and Glawischnig, 2009;Bednarek et al., 2011). Therefore,
MYB34, MYB51, and MYB122 possibly not only regulate
the IG biosynthesis pathway, but also activate genes in
the closely related camalexin biosynthesis pathway. Here we
addressed the potential involvement of three MYB transcription
factors in camalexin biosynthesis and show that especially
MYB51 and MYB122 are involved in camalexin biosynthesis,
because its synthesis is strongly reduced in corresponding
double and triple mutants. Metabolite complementation of
the triple myb34/51/122 mutant reveals the importance of
these MYBs in the regulation of camalexin biosynthesis
upstream of IAOx. Thus, camalexin and IGs not only possess
a tightly interconnected biosynthetic pathway, but are at
least partially regulated by the same R2R3-MYB transcription
factors.
Results
Camalexin Biosynthesis Genes are
Co-expressed with MYB51 and MYB122
Camalexin biosynthesis is induced locally by exposure to biotic
or abiotic stresses and the genes involved in its biosynthesis are
highly co-ordinately expressed. To address the role of MYB34,
MYB51, and MYB122 in camalexin biosynthesis, we exploited
existing co-expression databases like ATTED1(Obayashi et al.,
2009). The survey revealed that MYB51 and MYB122 are not
only co-regulated with genes for Trp and IAOx biosynthesis,
but also with CYP71B15/PAD3,CYP71A12,andCYP71A13
(Supplementary Tables S1 and S2). This implicates both MYB
factors as good candidate regulators of camalexin biosynthesis in
Arabidopsis.
1http://atted.jp/
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Frerigmann et al. Regulation of camalexin biosynthesis by MYBs
MYB51 and MYB122 are Induced by Silver
Nitrate and by Pathogen-Associated Molecular
Pattern (PAMP) from Pythium
aphanidermatum (PaNie)
To further validate the importance of R2R3-MYBs in camalexin
regulation, we analyzed the induction of MYB34,MYB51,and
MYB122 in response to elicitors of camalexin production. In a
pilot experiment, we treated Arabidopsis Col-0 WT plants with
AgNO3, a commonly used abiotic elicitor of camalexin induction,
which strongly induced CYP71B15, CYP71A13,MYB122,and
MYB51 (Figure 2). However, the expression of MYB34 was
reduced, indicating that it plays a less important role in
phytoalexin regulation.
In addition, we analyzed transgenic plants that expressed
a gene encoding a Nep1-like protein from Pythium
aphanidermatum (PaNie), which acts as a PAMP, under the
control of an ethanol-inducible promoter (Rauhut et al., 2009).
The production of this Nep1-like protein triggers the strong
accumulation of camalexin 8 h following ethanol inductions
(Rauhut et al., 2009). The transcription of MYB51 significantly
FIGURE 2 | Silver nitrate induces the transcription of MYB51 and
MYB122 as well as that of CYP71B15 and CYP71A13. The expression of
camalexin biosynthesis genes (CYP71B15 and CYP71A13)andofMYB34,
MYB51,andMYB122 upon silver nitrate (AgNO3) treatment is shown. The
relative expression in Col-0 was measured in leaves of 6-week-old plants 18 h
after treatment (MOCK =1). Data are means ±SE from four independent
experiments each with two to three biological replicates (n=11). Values
marked with asterisks are significantly different from those of control plants
(Student’s t-test; p<0.05).
increased 150 min after treatment, and that of CYP71B15,
CYP71A13,andMYB122 after 300 min (5 h; Figure 3).
Conversely, MYB34 was not induced by PaNie expression,
which confirms its minor role in camalexin regulation. A similar
induction pattern of the MYBs and camalexin genes was observed
upon colonization with the fungus Piriformospora indica
(Lahrmann et al., 2015). In addition, MYB51 transcription was
also increased 40 and 88 h after infection with the necrotrophic
pathogen B. cinerea,asrevealedbythepMYB51::GUS reporter
(Supplementary Figure S1).
Taken together, the expression patterns of MYB51 and
MYB122 implicate a role in camalexin biosynthesis.
The Induction of MYB51 and MYB122 upon
Wounding Coincides with that of the
Camalexin Biosynthesis Gene CYP71B15
Wounding of the plant surface creates a potential entry point for
invading pathogens, and plant response to injury by localized
defense responses includes the induction of defense-related
genes and the accumulation of anti-microbial proteins such as
proteinase inhibitors, chitinase, or glucosinolates (Ryan, 1990;
Chang et al., 1995;Reymond et al., 2000;Chassot et al., 2008).
Especially strong wounding releases oligogalacturonides from the
plant cell wall which can induce a local defense response similar
to bacterial PAMPs (Denoux et al., 2008). Thus wounding of
Arabidopsis leaves hasbeen previously shown to lead to immunity
to B. cinerea, because hyphal growth on wounded plants was
significantly inhibited in comparison to that on unwounded
controls (Chassot et al., 2008).
To address the involvement of the MYB34, MYB51, and
MYB122 transcription factors in wounding response, the
transcription of their respective genes was analyzed 1, 5, 10,
30, 120, and 300 min after strong wounding. Wounding of WT
Arabidopsis leaves increased the transcription of MYB51 and
MYB122, but not of MYB34 after 120 min of injury (Figure 4),
which represented the time-point of increased expression of the
camalexin biosynthesis gene CYP71B15 (Figure 3). This second
induction peak of MYB51 and MYB122 transcription appears to
be related to induction of camalexin biosynthesis. During the
second phase of the wounding response, the transcript levels
of MYB34 decreased, whereas expression of MYB51,MYB122,
and CYP71B15 continued to increase and remained high even
at 300 min (5 h) of treatment (Figure 4). The first peak in MYB
transcription recorded after 5–10 min of injury observed in this
study (Figure 3)andpreviously(Gigolashvili et al., 2007), was
associated with an increase in IG biosynthesis.
In order to confirm that the applied strong wounding does
not resemble solely jasmonate signaling, as it is known for
standard wounding application, hormone marker genes for
jasmonate (VSP2), salicylic acid (PR1), and ethylene/jasmonate
(PDF1.2) were checked (Supplementary Figure S2). As expected
no induction, but even a repression of VSP2 was observed,
while PR1 and PDF1.2 transcript levels increased similar to
oligogalacturonide treatment (Denoux et al., 2008).
Together, these data suggest a role for MYB51 and MYB122
in priming camalexin biosynthesis at later stages of wounding
response, to protect against biotic and abiotic stressors.
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Frerigmann et al. Regulation of camalexin biosynthesis by MYBs
FIGURE 3 | Induction of MYB51 and MYB122 in rosette leaves of
Alc::PaNieDc plants. Expression of MYB34 (A),MYB51 (B),MYB122 (C),
CYP71A13 (D), and the camalexin biosynthesis gene CYP71B15 (E) following
AgNO3treatment. Relative expression in pAlc::PaNieDc was measured in leaves
of 6-week-old plants induced with ethanol (for 60 min, 150 min or 300 min; time
point 0 =1 min). Data are means ±SE from two independent experiments
each with three biological replicates (n=6). Values marked with asterisks are
significantly different from those of control plants (Student’s t-test; p<0.05).
FIGURE 4 | Wounding response of MYB34,MYB51, and MYB122 in
leaves. Detached leaves of 6-week-old Col-0 plants grown under short day
conditions were strongly wounded. Leaves were harvested after 1, 5, 10, 30,
120, and 300 min and processed for transcript analysis by qPCR. Relative
transcript levels for MYB34, MYB51,MYB122,andCYP71B15 are shown for
wounded vs. unwounded leaves (time-point 0 =1 min). Data are means ±SE
from three independent cultivations each with two biological replicates (n=6).
Values marked with asterisks are significantly different from the 0 time point
(Student’s t-test; p<0.05).
myb Mutants are Impaired in UV-Dependent
Camalexin Induction
The abiotic elicitor UV can be easily applied to uniformly
trigger camalexin induction in Col-0 (Müller et al., 2015 and
Supplementary Figure S3B). We tested double and triple loss-
of-function mutants of MYB51,MYB122,andMYB34 for
their ability to synthesize camalexin after UV treatment. The
camalexin content of leaves of double myb51/122,myb34/51,
and triple myb34/51/122 mutants was strongly reduced after
18 h UV treatment (Figure 5), suggesting an important
function for all three MYBs and especially MYB51 in camalexin
accumulation. The myb34/122 double mutant showed only a
minor and statistically non-significant reduction in camalexin
accumulation. Camalexin levels were significantly lower in the
triple myb34/51/122 mutant than in WT plants, but not in
comparison to that of the myb34/51 and myb51/122 mutants.
However, 24 h after UV treatment, only the myb51/122 double
mutant and myb34/51/122 triple mutant contained significantly
less camalexin than the WT (Supplementary Figure S3). These
camalexin levels in myb mutant backgrounds confirm the
importance of MYB51 and MYB122 in camalexin accumulation.
The role of MYB34 appears to be minor.
The Camalexin Biosynthesis Genes CYP71B15
and CYP71A13 are not Downregulated in the
Triple myb34/51/122 Mutant
The myb34/51/122 triple mutant is limited in the synthesis of
IAOx, a precursor of IGs and camalexin and consequently,
IGs (Frerigmann and Gigolashvili, 2014)andcamalexinare
reduced (Figure 5A). To investigate the role of MYBs on the
expression of camalexin biosynthesis genes, the steady-state
mRNA levels of CYP71B15 and CYP71A13 were analyzed in the
triple myb34/51/122 mutant. If MYB51, MYB122, and MYB34
directly regulate camalexin biosynthesis genes, the expression of
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Frerigmann et al. Regulation of camalexin biosynthesis by MYBs
FIGURE 5 | The UV-dependent induction of camalexin is impaired in
multiple myb knock-out mutants. (A) The relative amount of camalexin after
18 h UV treatment in Col-0 and double and triple myb mutants (Col-0 =100%).
Data are means ±SE from two independent cultivations each with six biological
replicates (n=12). (B) The relative amount of camalexin 18 h after UV treatment
in myb34/51/122 fed with H2O, or 0.25 mM Trp, IAOx or IAN (Col-0 =100%).
Data are means ±SE from three independent cultivations each with six
biological replicates (n=18). Different letters indicate significant differences at
p<0.05 (Kruskal Wallis Test, followed by a Mann Whitney UTe s t wi th
Bonferroni-corrected p-values; p<0.05).
these genes should be significantly decreased in myb34/51/122,
similar to that of IG biosynthesis genes.
Genes involved in IAOx biosynthesis were strongly down
regulated in the myb34/51/122 mutant (Figure 6), whereas
the expression of CYP71B15 and CYP71A13 either remained
unchanged or increased. This increase in specific camalexin gene
expression is not accompanied by higher levels of camalexin
in the mutants (Supplementary Figure S3). The activity of
pCYP79B2:uidA increased, whereas that of pCYP71B15:uidA
was not affected by all three MYB factors, as demonstrated
by co-expression via trans-activation assays with cultured
Arabidopsis cells (Berger et al., 2007)(Figure 6B). Conversely,
WRKY33, the transcription regulator of CYP71B15,induced
pCYP71B15::uidA when co-expressed with p35S:WRKY33
in cultured cells. Thus, MYBs do not directly regulate these
important camalexin biosynthesis genes downstream of
IAOx.
We also attempted to metabolically complement the low-
camalexin phenotype of myb34/51/122 mutant leaves upon
UV-treatment,byfeedingthemwithIAOx,IANorTrp.
Treatment with IAOx or IAN partially restored camalexin levels
in the myb34/51/122 mutant upon UV-treatment, whereas Trp
feeding did not (Figure 5B). Because Trp could not complement
the low-camalexin phenotype of the triple myb mutant, we
conclude that the three MYB factors studied essentially regulate
the synthesis of IAOx from Trp, but are not directly involved in
the activation of genes downstream of IAOx.
Discussion
The camalexin biosynthetic pathway has been largely elucidated,
but little is known about the regulatory components of this
pathway. WRKY33 binds to the promoters of CYP71B15 and
CYP71A13 to activate camalexin biosynthesis, but also other
regulators have to be involved, because its loss of function leads
to low camalexin levels only during early stages of pathogen
infection (Birkenbihl et al., 2012). In this study, we addressed
the role of the known IG regulators MYB34, MYB51, and
MYB122 in the biosynthesis of camalexin in Arabidopsis.Because
the camalexin and IG biosynthetic pathways have a common
evolutionary origin and are tightly interconnected, these two
classesofcompoundsmightberegulatedbythesamesetof
transcription factors.
MYB51 and MYB122 are Induced by Biotic and
Abiotic Triggers of Camalexin Biosynthesis
Camalexin biosynthesis is induced in plants following exposure
to abiotic stresses such as heavy metal treatment or UV-C
radiation or exposure to pathogens. We addressed the role
of MYB34, MYB51 and MYB122 in camalexin biosynthesis
by analysing their mRNA levels in plants exposed to several
camalexin-inducing agents. Treatment of Arabidopsis WT plants
with the abiotic elicitor AgNO3caused a significant increase
in steady-state mRNA levels of MYB122 and MYB51,butnot
of MYB34. Similarly, MYB122 and MYB51 were induced in
transgenic plants that expressed a NEP1-like protein from PaNie
under the control of an ethanol-inducible promoter (Rauhut
et al., 2009), endorsing the possible role of these two transcription
factors in camalexin biosynthesis. In addition, the MYB51
promoter was also induced after treatment with B. cinerea
(Supplementary Figure S1). Finally, wounding of leaves, which
is known to provide a protection against B. cinerea by priming
camalexin production in Arabidopsis (Chassot et al., 2008),
increased the expression of MYB51 and MYB122. Two induction
peaks of MYB expression in response to wounding within the
analyzed time scale occurred: the first peak in wounding response
of MYB51 transcript level was observed after 5–10 min of injury
(Gigolashvili et al., 2007) and was associated with a switch
in the IG biosynthesis machinery, and the second phase of
induction concerned the transcription of MYB51 and MYB122,
but not MYB34, after 120 min of injury, which coincided with
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Frerigmann et al. Regulation of camalexin biosynthesis by MYBs
FIGURE 6 | The presence of solely MYB34,MYB51,orMYB122 is not
enough to activate the pCYP71B15:uidA and pCYP71A13:uidA in trans.
(A) The expression of specific genes for camalexin biosynthesis (CYP71B15 and
CYP71A13) and genes underlying the conversion of tryptophan to IAOx
(CYP79B2 and CYP79B3) was analyzed in the myb34/51/122 mutant. Relative
expression was measured in leaves of 6-week-old plants (Col-0 =1). Data are
means ±SE from three independent cultivations with three biological replicates
(n=9). Values marked with asterisks are significantly different from those of
control plants (Student’s t-test; p<0.05). (B,C) Tra n s -activation with MYB34,
MYB51,andMYB122 and target promoters of the camalexin biosynthesis
pathway genes CYP79B2, CYP71A13,andCYP71B15.(B) The
promoter–reporter constructs of pCYP71A13:uidA,pCYP71B15:uidA or
pCYP79B2:uidA were co-expressed in the same cells with effector constructs
p35S:MYB34,p35S:MYB51,orp35S:MYB122. The cultured A. thaliana cells
were inoculated with the supervirulent Agrobacterium tumefaciens strain
LBA4404.pBBR1MCS.virGN54D, containing either only the reporter construct
or the reporter and effector construct in a 1:1 ratio. The GUS staining indicates
trans-activation of the promoter by the effector. (C) The trans-activation
potential of the p35S:WRKY33 effector toward the promoters of CYP71A13 and
CYP71B15.
an strongly increased expression of the camalexin biosynthesis
gene CYP71B15 (Figure 3). This second phase might therefore be
related to camalexin biosynthesis. According to directed studies
(Schuhegger et al., 2006;Chassot et al., 2008) and to the analysis
of microarray data (see, e.g., efp browser analysis of ATH1
Affymetrix data2;Winter et al., 2007)CYP71B15 did not show
strong responsiveness to wounding. In this light it was surprising
that here CYP71B15 expression was induced more than 100-fold.
We here applied rather harsh and extensive wounding to the
tissue. Possibly severe wounding induces camalexin biosynthesis
by eliciting oligogalacturonides, which originate from the plant
cell wall (Denoux et al., 2008), while restricted wounding has a
minor effect.
Taken together, the induced expression of MYB51
and/or MYB122 after exposure to biotic and abiotic
triggers of camalexin biosynthesis [AgNO3,wounding,
PAMP (PaNie) and the necrotrophic pathogen B. cinerea]
suggests that the transcription factors encoded by these
genes play a role in camalexin biosynthesis. Because
the expression of MYB34 was not affected by the same
treatments, we conclude that it is not involved in camalexin
biosynthesis.
2http://bar.utoronto.ca/efparabidopsis/cgi-bin/efpWeb.cgi
The Role of MYBs in the Regulation of IAOx A
Branch-Point in IG, Camalexin, ICA, and IAA
Synthesis
The initial step of camalexin, IG, and ICA biosynthesis is
the conversion of Trp to IAOx mediated by CYP79B2 and
CYP79B3. The interplay between IAOx-derived metabolites was
also demonstrated by the analysis of mutants deficient in IG
biosynthesis. The loss of function of IG biosynthetic genes
downstream of IAOx (cyp83b1/sur2,C-S lyase/sur1,andugt74b1
null mutants) results in a strong auxin-overproducing phenotype
(Barlier et al., 2000;Grubb et al., 2004;Mikkelsen et al., 2004).
This is possibly due to IAOx accumulation in cells because of
“biosynthetic blockage” in the IG pathway, and consequently,
unspecific conversion of excess IAOx to the auxin IAA. Other
metabolites such as ICA and camalexin, which can be also
induced in these mutants, were not analyzed in the above-
mentioned studies.
In the WT, biosynthesis of IAOx is under tight transcriptional
control by MYB34, MYB51 and MYB122 transcription factors
(Celenza et al., 2005;Gigolashvili et al., 2007;Frerigmann
and Gigolashvili, 2014). Consequently the MYBs, especially
the MYB51 and MYB122 are considered as candidates in the
regulation of other Trp-derived metabolites than IGs, e.g.,
camalexin. We propose the following scenario for the role
Frontiers in Plant Science | www.frontiersin.org 7August 2015 | Volume 6 | Article 654
Frerigmann et al. Regulation of camalexin biosynthesis by MYBs
of MYB34, MYB51, and MYB122 in camalexin biosynthesis:
they regulate genes involved in camalexin biosynthesis similar
to how they regulate IG production. However, they have
to act in concert with other regulators, since they are also
highly expressed and regulate IG production in non-triggered
tissue and would therefore lead to camalexin accumulation
in healthy plants. We therefore suggest that specific signaling
components exist upstream to these MYB factors, including
alternative transcription factors, which activate different sets
of genes for camalexin and IG biosynthesis. These different
signaling components are responsive to AgNO3,PAMPs,
and UV in the case of camalexin biosynthesis, and to
herbivores regarding IG production. Thus, to enable camalexin
biosynthesis, the MYBs and additional transcription factors
are activated: MYB factors regulate IAOx biosynthesis, and
alternative (unknown) regulators, together with WRKY33,
control camalexin genes downstream of IAOX (e.g., CYP71B15
and CYP71A13).
The Regulation of Camalexin Biosynthesis by
MYB51, MYB122, and MYB34
The analysis of camalexin accumulation in higher-order loss-
of-function mutants of MYB51, MYB122,andMYB34 treated
with UV revealed a strong reduction in the camalexin content of
leaves of double myb51/122, myb34/51,andtriplemyb34/51/122
mutants (Figure 5), emphasizing the importance of MYB51
in camalexin accumulation in Arabidopsis. The role of MYB34
for camalexin induction was negligible, whereas MYB122
contributes camalexin biosynthesis, as demonstrated by the
response of higher-order myb mutants after 24 h treatment
with UV (Supplementary Figure S3). We propose the following
explanation for the observed role of MYB122:(i)MYB122 is
the lowest-expressed gene among the three MYBs (Frerigmann
and Gigolashvili, 2014), therefore, the observed metabolic
effects reflect its transcript abundance; (ii) transcription of
MYB122 is positively regulated by MYB51, which is essential
for camalexin biosynthesis. This positive correlation between
MYB51 and MYB122 expression due to reciprocal regulation
was previously demonstrated by the analysis of myb knock-
out and overexpression plants (Frerigmann and Gigolashvili,
2014). The reciprocal activation of mRNAs of these two MYBs
might play an important role in the regulation of camalexin
biosynthesis.
To elucidate further the role of the MYBs, we performed
a metabolic complementation experiment by feeding the UV-
treated leaves of the camalexin-deficient mutant myb34/51/122
with the precursors Trp, IAOx, or IAN (Figure 5B). This
experiment demonstrated that the three MYBs are essential
to regulate the synthesis of IAOx from Trp during camalexin
biosynthesis. However, they are not directly involved in the
activation of genes downstream of IAOx, because both IAOx
and IAN could complement the low camalexin phenotype
of the myb34/51/122 mutant. These experiments suggest the
possibility that MYB51 and MYB122 are indirectly involved in
the activation of CYP71B15 or CYP71A13 by forming dynamic
regulatory complexes with other transcription factors. However,
even if the MYB factors interact with other transcription factors
that regulate camalexin biosynthesis, they are not thought to
activate CYP71B15 or CYP71A13. In support of this, qRT-PCR
analysis of the triple myb34/51/122 mutant and the promoter–
effector assays in cultured cells suggested that CYP71B15 and
CYP71A13 are regulated independently from the MYB genes
(Figure 6).
Taken together, the data substantiate the importance of
three MYB factors in the regulation of camalexin biosynthesis
by providing the precursor metabolite IAOx (Figure 1).
There is no evidence for the direct MYB-mediated regulation
of camalexin biosynthesis genes downstream of IAOx. The
identification of the possible role of MYB51 and MYB122 in the
activation of CYP71B15 or CYP71A13 in complex with other,
yet to be identified transcription factors, is anticipated in the
future.
Experimental Procedures
Arabidopsis Lines Used in this Study
The Arabidopsis loss-of-function mutants used in this study
are all in the Columbia-0 (Col-0) genetic background. The
T-DNA insertion mutants for MYB34,MYB51,MYB122
have been previously described and are myb34 [At5g60890;
WiscDsLox424F3; (Frerigmann and Gigolashvili, 2014),
myb51/hig1 (At1g18570; GK228B12; Gigolashvili et al., 2007),
and myb122-2 (At1g74080; WiscDsLoxHs206_04H; Frerigmann
et al., 2014). The multiple mutants were generated and described
by Frerigmann and Gigolashvili (2014).
The ethanol-inducible overexpression line Alc::PaNieDc
(Rauhut et al., 2009)andthepMYB51::GUS reporter line
(Gigolashvili et al., 2007) were generated as described.
Biotic and Abiotic Treatments of Arabidopsis
Leaves
For treatment with AgNO3, plants were grown for six weeks
under short-day conditions. Pots with five plants were sprayed
with AgNO3or MOCK and harvested after 18 h in the dark
[AgNO3(5 mM AgNO3+0.02% Silver); MOCK (0.02% Silver)].
Expression of the NEP1-like protein in Alc::PaNieDc plants
was induced by spraying with ethanol (2%) or with water for the
MOCK samples. Samples were harvested at four different time
points (0, 60, 150, and 300 min).
For wounding experiments, detached leaves of 6-week-old
Col-0 plants were heavily crushed with forceps on the whole
leaf, additionally strongly wounded with a scalpel and stored
in a petri dish with wet paper tissue till harvest. After 0, 1, 5,
10, 30, 120, and 300 min leaves were frozen in liquid nitrogen
and subsequent directed for RNA isolation and gene expression
analysis by qRT-PCR. Wounding and storage for different time
points had no effect on ACTIN2 levels.
Five-week-old plants were infected with a 6 μL droplet
of B. cinerea spores (2 ×106spores/μLinLB-media)or
LB-media as MOCK. After infection, plants remained under
short-day conditions but with a relative humidity of about 100%.
Samples were harvested at different time points (0, 40, 88 h)
Frontiers in Plant Science | www.frontiersin.org 8August 2015 | Volume 6 | Article 654
Frerigmann et al. Regulation of camalexin biosynthesis by MYBs
and fixed immediately with ice-cold acetone. GUS staining was
performed overnight at 37C. Histochemical localisation of GUS
in transgenic plants harboring the pMYB51::uidA construct was
performed as described Gigolashvili et al. (2007).
UV-Treatment, Metabolite Feeding and
Camalexin Measurement
For UV induction, leaves were cut at the base of the petioles
and placed on wet tissue paper under a UV-lamp (Desaga UV-
VIS, λ=254 nm, 8 W) at a distance of 20 cm and were
irradiated for 2 h (Mucha et al., 2015). Camalexin extraction and
HPLC-analysis was performed essentially as previously described
(Schuhegger et al., 2006). Leaves were extracted twice in 200 μl
MeOH/H2O (4:1; v/v) at 65C for 30 min. Combined extracts
were centrifuged at 17,000 gfor 15 min and analyzed by
reverse phase HPLC (LiChroCART 250-4, RP-18, 5 μm, Merck;
1mL·min1; MeOH/H2O (1:1; v/v) for 2 min, followed by a
10 min linear gradient to 100% MeOH, followed by 3 min 100%
MeOH). Camalexin was quantified using a Shimadzu F-10AXL
fluorescence detector (318 nm excitation, 370 nm emission)
and by UV absorption at 318 nm applying a calibration curve
with authentic standard. For intermediate feeding leaves were
detached at the petiole after 2 h UV treatment and incubated in
400 μl 0.25 mM precursor solution or water for an additional
16 h.
RNA Extraction and qRT-PCR
Total RNA extraction and qRT-PCR analysis were as described by
Frerigmann and Gigolashvili (2014).Therelativequantication
of expression levels was performed using the comparative delta
Ct method, and the calculated relative expression values were
normalized to that of ACTIN2 and compared with the expression
level in untreated WT plants (Col-0 =1). When not specified in
the figure legend, three technical replicates and three biological
replicates from independently grown plants were analyzed (for
primer sequences see Supplementary Table S3).
Plant Growth Conditions
Seeds of A. thaliana ecotype Col-0 and mutant lines were
stratified for 2–7 days in the dark at 4C to break seed dormancy.
Plants were grown in growth cabinets with a light/dark cycle
of 8 h/16 h and a day/night temperature of 21C/18C, 40%
humidity and a mean photon flux density of 150 μmol m2s1.
A minimum of 100 mg rosette material was harvested from
6-week-old plants, immediately frozen in liquid nitrogen and
kept at –80C until RNA extraction or metabolite analysis.
Reporter Construction for Transient
Co-transformation Experiments
The promoter regions of CYP71B15 (At3g26830; from –1,593
to +58 bp) and CYP71A13 (At1g73500; from –2,124 to
+42 bp) were amplified from genomic DNA of Arabidopsis
plants and cloned into the pEntry TOPO vector (Invitrogen).
The construction of the CYP79B2 promoter was performed
as described (Gigolashvili et al., 2007). The corresponding
primer sequences are listed in Supplementary Table S4. The
binary plant transformation vector pGWB3i containing an
intron within the uidA gene was used to drive Agrobacterium-
mediated expression of uidA from these promoters and pGWB3i
was recombined with the pEntry Topo vectors containing
the promoter of interest using LR reactions (Invitrogen). The
final pCYP71B15::uidA,pCYP71A13::uidA and pCYP79B2::uidA
clones in pGWB3i,aswellasp35S::MYB34,p35S::MYB51,
p35S::MYB122,andp35S:WRKY33 in pGWB2 were used to
transform the supervirulent Agrobacterium tumefaciens strain
LBA4404.pBBR1MCS.virGN54D as described by Berger et al.
(2007).
Acknowledgments
We thank Alexandra Chapman and Ulrike Hebbeker for practical
assistance and Dr. John Chandler for critically reading the
manuscript. We also cordially thank Prof. Dr. Ulf-Ingo Flügge
for his continuous support over many years. This work was
financially supported by the Deutsche Forschungsgemeinschaft
(Project Reference Numbers: GI 824/1-1, EXC 1028, and
GL346/5-1, Heisenberg fellowship to EG).
Supplementary Material
The Supplementary Material for this article can be found online
at: http://journal.frontiersin.org/article/10.3389/fpls.2015.00654
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Conflict of Interest Statement: The authors declare that the research was
conducted in the absence of any commercial or financial relationships that could
be construed as a potential conflict of interest.
Copyright © 2015 Frerigmann, Glawischnig and Gigolashvili. This is an open-access
article distributed under the terms of the Creative Commons Attribution License
(CC BY). The use, distribution or reproduction in other forums is permitted, provided
the original author(s) or licensor are credited and that the original publication in this
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Frontiers in Plant Science | www.frontiersin.org 11 August 2015 | Volume 6 | Article 654

Supplementary resource (1)

... In the current study, we identified 39 transcription factors that were predicted to regulate GSL biosynthesis, including 15 AP2/ERF transcription factors (ERFs, ARF3, DREBs and ANT), seven zinc finger proteins (CZF1, STZ, ZHDs, DOF1, OBP2 and ZFP4), two WRKY transcription factors (WRKY33), one growth regulator (GRF1), one NAC family protein (NAC102), one E2F transcription factor (E2FC), one nu- clear transcription factor Y subunit B (NF-YB10) and 11 MYB transcription factors (MYBs). Among these, homologous genes of MYB34, MYB51, MYB122 and WRKY33, which are involved in GSL biosynthesis [42,70], were identified on the interval regions of chromosomes A03, A04, A07, A09, C02, C06, C08 and C09, respectively (Table S4). We also identified some novel transcription factor genes (e.g., MYB44, ERF025, NF-YB10 and E2FC) associated with the significant SNPs, with obvious differences in expression in developing seeds of BnHG and BnLG ( Figure 5, Table S4). ...
... In the current study, we identified 39 transcription factors that were predicted to regulate GSL biosynthesis, including 15 AP2/ERF transcription factors (ERFs, ARF3, DREBs and ANT), seven zinc finger proteins (CZF1, STZ, ZHDs, DOF1, OBP2 and ZFP4), two WRKY transcription factors (WRKY33), one growth regulator (GRF1), one NAC family protein (NAC102), one E2F transcription factor (E2FC), one nuclear transcription factor Y subunit B (NF-YB10) and 11 MYB transcription factors (MYBs). Among these, homologous genes of MYB34, MYB51, MYB122 and WRKY33, which are involved in GSL biosynthesis [42,70], were identified on the interval regions of chromosomes A03, A04, A07, A09, C02, C06, C08 and C09, respectively (Table S4). We also identified some novel transcription factor genes (e.g., MYB44, ERF025, NF-YB10 and E2FC) associated with the significant SNPs, with obvious differences in expression in developing seeds of BnHG and BnLG ( Figure 5, Table S4). ...
... GSLs play diverse roles in plant defense, and several transcription factors have been identified as important regulators of GSL biosynthesis. For example, WRKY33 directly regulates indolic glucosinolate (IGS) biosynthesis, specifically the production of 4-methoxyindole-3-ylmethyl glucosinolate (4MI3G), by directly activating the expression of CYP81F2, IGMT1 and IGMT2 [42], while the R2R3-MYB transcription factors, MYB51, MYB34, MYB122 and MYB115, regulate aliphatic and indole GSL biosynthesis [35,50,69,70,105]. In addition, the zinc finger protein OBP2 has been implicated in indole GSL biosynthesis in A. thaliana [106]. ...
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Glucosinolates (GSLs) are secondary plant metabolites that are enriched in rapeseed and related Brassica species, and they play important roles in defense due to their anti-nutritive and toxic properties. Here, we conducted a genome-wide association study of six glucosinolate metabolites (mGWAS) in rapeseed, including three aliphatic glucosinolates (m145 gluconapin, m150 glucobrassicanapin and m151 progoitrin), one aromatic glucosinolate (m157 gluconasturtiin) and two indole glucosinolates (m165 indolylmethyl glucosinolate and m172 4-hydroxyglucobrassicin), respectively. We identified 113 candidate intervals significantly associated with these six glucosinolate metabolites. In the genomic regions linked to the mGWAS peaks, 187 candidate genes involved in glucosinolate biosynthesis (e.g., BnaMAM1, BnaGGP1, BnaSUR1 and BnaMYB51) and novel genes (e.g., BnaMYB44, BnaERF025, BnaE2FC, BnaNAC102 and BnaDREB1D) were predicted based on the mGWAS, combined with analysis of differentially expressed genes. Our results provide insight into the genetic basis of glucosinolate biosynthesis in rapeseed and should facilitate marker-based breeding for improved seed quality in Brassica species.
... Other transcription factors, including three members of the R2R3-MYB family, MYB34, MYB51 and MYB122 were also shown to regulate the biosynthesis of both glucosinolates and camalexin after pathogen challenge or treatment with elicitors (Frerigmann and Gigolashvili 2014). Expression of MYB51 and MYB122, but not MYB34 is induced after treatment with AgNO 3 and Flg22 (Fig. 3C) and infection with the necrotrophic fungus Plectosphaerella cucumerina (Frerigmann et al. 2015 and. The myb34/51 and myb51/112 mutants as well as the triple myb34/51/122 mutants showed similar reduction in camalexin amounts compared to the wild type after AgNO 3 and Flg22 treatment (Frerigmann et al. 2015 and. ...
... Expression of MYB51 and MYB122, but not MYB34 is induced after treatment with AgNO 3 and Flg22 (Fig. 3C) and infection with the necrotrophic fungus Plectosphaerella cucumerina (Frerigmann et al. 2015 and. The myb34/51 and myb51/112 mutants as well as the triple myb34/51/122 mutants showed similar reduction in camalexin amounts compared to the wild type after AgNO 3 and Flg22 treatment (Frerigmann et al. 2015 and. The concert action of MYB51 and MYB122 can play a critical role in inducing camalexin production through activation of CYP73B2/3, but not of CYP71A13 and PAD3 expression. ...
... The concert action of MYB51 and MYB122 can play a critical role in inducing camalexin production through activation of CYP73B2/3, but not of CYP71A13 and PAD3 expression. In the same line, exogenous application of camalexin precursors such as IAOx largely restored camalexin levels in myb34/51/122 plants, whereas Trp had no effect, indicating that MYBs may act at the level of the biosynthesis of the camalexin precursor IAOx (Frerigmann et al. 2015). Conversely, in comparison with Col-0 plants, triple myb34/51/122 mutants accumulated higher amounts of camalexin at 48 h infection with the necrotrophic fungus, P. cucumerina (Frerigmann et al. 2016), demonstrating that MYB34, MYB51 and MYB122 negatively regulate camalexin biosynthesis in response to this pathogen. ...
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Plants harbor various beneficial microbes that modulate their innate immunity, resulting in an induced systemic resistance (ISR) against a broad range of pathogens. Camalexin is an integral part of Arabidopsis innate immunity, but the contribution of camalexin biosynthesis in ISR is poorly investigated. In this study, we focused on the primed camalexin accumulation by two beneficial bacteria, Pseudomonas fluorescens and Bacillus subtilis and its role in the ISR against Botrytis cinerea and Pseudomonas syringae Pst DC3000. Our data provide evidence that colonization of A. thaliana roots by beneficial bacteria triggers ISR against both pathogens and primes plants for enhanced accumulation of camalexin and CYP71A12 transcript in leaf tissues. The highest responses were observed in P. fluorescens-ISR against B. cinerea, while B. subtilis was more efficient against Pst DC3000. Analysis of cyp71a12 and pad3 mutants revealed that the loss of camalexin synthesis affected ISR mediated by both bacteria against B. cinerea. Data revealed a significant contribution of CYP71A12 and PAD3 to the pathogen-triggered accumulation of camalexin, while PAD3 does not seem to contribute to ISR against Pst DC3000. This pointed out a significant contribution of camalexin in ISR against B. cinerea, but not always against the Pst DC3000. Experiments with Arabidopsis mutants compromised in different hormonal signaling pathways highlighted that B. subtilis stimulates similar signaling pathways upon infection with both pathogens, since SA but no JA and ET are required for ISR-camalexin accumulation. However, P. fluorescens-induced ISR differs depending on the pathogen. In this case, both SA and JA are required for camalexin accumulation upon B. cinerea infection, while camalexin is not necessary for priming against Pst DC3000.
... One early response to pyrimidine starvation was the strongly increased expression of genes encoding enzymes that synthesize the indole glucosinolate camalexin, the major phytoalexin in Arabidopsis which plays an important role in defense against pathogens and herbivores (Supplemental Figure 2; Lemariéet al., 2015). Several genes in this pathway are regulated by MYB51/HIGH INDOLIC GLUCOSINOLATE 1 (Frerigmann et al., 2015), which was shown to be strongly induced at day 5 (Supplemental Figure 2). In contrast, expression of myrosinase 1 and 2, which activate glucosinolates, producing toxic isothiocynante and thiocyanate defense compounds (Shroff et al., 2008), was repressed (Supplemental Figure 2). ...
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In Arabidopsis seedlings, inhibition of aspartate transcarbamoylase (ATC) and de novo pyrimidine synthesis resulted in pyrimidine starvation and developmental arrest a few days after germination. Synthesis of pyrimidine nucleotides by salvaging of exogenous uridine (Urd) restored normal seedling growth and development. We used this experimental system and transcriptional profiling to investigate genome-wide responses to changes in pyrimidine availability. Gene expression changes at different times after Urd supplementation of pyrimidine-starved seedlings were mapped to major pathways of nucleotide metabolism, in order to better understand potential coordination of pathway activities, at the level of transcription. Repression of de novo synthesis genes and induction of intracellular and extracellular salvaging genes were early and sustained responses to pyrimidine limitation. Since de novo synthesis is energetically more costly than salvaging, this may reflect a reduced energy status of the seedlings, as has been shown in recent studies for seedlings growing under pyrimidine limitation. The unexpected induction of pyrimidine catabolism genes under pyrimidine starvation may result from induction of nucleoside hydrolase NSH1 and repression of genes in the plastid salvaging pathway, diverting uracil (Ura) to catabolism. Identification of pyrimidine-responsive transcription factors with enriched binding sites in highly coexpressed genes of nucleotide metabolism and modeling of potential transcription regulatory networks provided new insights into possible transcriptional control of key enzymes and transporters that regulate nucleotide homeostasis in plants.
... Therefore, this gene may cause changes in transcriptional regulatory activity and DNA-binding transcription factor activity in Arabidopsis, and it is speculated that HvWRKY1 may play a similar role in resistance to leaf stripe disease in Qingke. Frerigmann et al. (2015) showed that the transcription factors MYB34, MYB51, and MYB122 are precursors of plants protectin that protect against infection by specific pathogens and regulate indole-3-acetaldoxime (IAOx). In Botrytis cinerea, Wang et al. (2022) found that BcWRKY33A directly activated the expression of BcMYB51-3 and downstream IGS biosynthetic genes, thereby improving plant tolerance to Botrytis cinerea infection. ...
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To explore the role of WRKY transcription factors (TFs) in the resistance process of Qingke (Hordeum vulgare L. var. nudum Hook. f.), leaves of the leaf stripe disease-resistant variety Kunlun 14 and the susceptible variety Z1141 were sequenced by transcriptome sequencing (RNA-seq). A differentially expressed gene HvnWKRY1 was identified, and its disease-resistance function was preliminarily analysed. The result showed that the open reading frame (ORF) of the gene was 1 062 bp and encoded 354 amino acids. It contained the conserved WRKY domain (273-351) and belonged to the WRKY protein family. The phylogenetic tree results showed that HvWRKY1 was most closely related to Hordeum vulgare L. The WRKY family of Qingke, barley, maize and rice were divided into categories I, II, and III, among which HvWRKY1 was located in group III. Results of the quantitative real-time fluorescence PCR (qRT-PCR) showed that the expression of HvWRKY1 was significantly (P < 0.01) higher in leaf stripe infected leaves of Kunlun 14 than that of Z1141. In Arabidopsis thaliana transformed with HvWRKY1, resistance to Botrytis cinerea was enhanced. The RNA-seq analysis showed there were 824 differentially expressed genes (DEGs). Data of the Kyoto Encyclopedia of Genes and Genomes (KEGG) enrichment indicated, that a plant-pathogen interaction pathway was enriched. This study is expected to provide a theoretical basis for further studies of functioning of the Qingke gene HvWRKY1 in resistance to the leaf stripe disease.
... MYB34 is an important transcription factor of indole glucosinolate biosynthesis. In A. thaliana, MYB34 positively regulates the transcription of CYP79B2/B3 genes for the biosynthesis of indole glucosinolates [56,57]. Additionally, in Arabidopsis, the expression of AtMYB34 is inhibited through ABA and MejA signaling pathways, thereby negatively regulating the synthesis of glucoside. ...
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Cabbage (Brassica oleracea var. capitata) is a vegetable rich in glucosinolates (GSLs) that have proven health benefits. To gain insights into the synthesis of GSLs in cabbage, we systematically analyzed GSLs biosynthetic genes (GBGs) in the entire cabbage genome. In total, 193 cabbage GBGs were identified, which were homologous to 106 GBGs in Arabidopsis thaliana. Most GBGs in cabbage have undergone negative selection. Many homologous GBGs in cabbage and Chinese cabbage differed in expression patterns indicating the unique functions of these homologous GBGs. Spraying five exogenous hormones significantly altered expression levels of GBGs in cabbage. For example, MeJA significantly upregulated side chain extension genes BoIPMILSU1-1 and BoBCAT-3-1, and the expression of core structure construction genes BoCYP83A1 and BoST5C-1, while ETH significantly repressed the expression of side chain extension genes such as BoIPMILSU1-1, BoCYP79B2-1, and BoMAMI-1, and some transcription factors, namely BoMYB28-1, BoMYB34-1, BoMYB76-1, BoCYP79B2-1, and BoMAMI-1. Phylogenetically, the CYP83 family and CYP79B and CYP79F subfamilies may only be involved in GSL synthesis in cruciferous plants. Our unprecedented identification and analysis of GBGs in cabbage at the genome-wide level lays a foundation for the regulation of GSLs synthesis through gene editing and overexpression.
... Their Gene Ontology (GO) enrichment analysis revealed that the most significantly enriched GO term was "response to stimulus" as the most significantly enriched process, followed by "defense response" and "cell wall modification". Additionally, they confirmed the importance of MYB51 in regulating the synthesis of camalexin in Pst-infected Arabidopsis [12,15]. ...
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Accessions of one plant species may show significantly different levels of susceptibility to stresses. The Arabidopsis thaliana accessions Col-0 and C24 differ significantly in their resistance to the pathogen Pseudomonas syringae pv. tomato (Pst). To help unravel the underlying mechanisms contributing to this naturally occurring variance in resistance to Pst, we analyzed changes in transcripts and compounds from primary and secondary metabolism of Col-0 and C24 at different time points after infection with Pst. Our results show that the differences in the resistance of Col-0 and C24 mainly involve mechanisms of salicylic-acid-dependent systemic acquired resistance, while responses of jasmonic-acid-dependent mechanisms are shared between the two accessions. In addition, arginine metabolism and differential activity of the biosynthesis pathways of aliphatic glucosinolates and indole glucosinolates may also contribute to the resistance. Thus, this study highlights the difference in the defense response strategies utilized by different genotypes.
... However, AtMYB11, AtMYB111 and AtMYB12 of subgroup 7 play crucial roles in the aspect of flavonoid biosynthesis [16]. Similarly, AtMYB34, AtMYB51 and AtMYB122 of subgroup 12 play crucial roles in the aspect of glucosinolate biosynthesis in roots [17]. Furthermore, some R2R3-MYB members are involved in cell identity and fate, such as AtMYB0, AtMYB23 and AtMYB66 in subgroup 15 [18]. ...
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The MYB gene family is involved in the regulation of plant growth, development and stress responses. In this paper, to identify Theobroma cacao R2R3-MYB (TcMYB) genes involved in environmental stress and phytohormones, we conducted a genome-wide analysis of the R2R3-MYB gene family in Theobroma cacao (cacao). A total of 116 TcMYB genes were identified, and they were divided into 23 subgroups according to the phylogenetic analysis. Meanwhile, the conserved motifs, gene structures and cis-acting elements of promoters were analyzed. Moreover, these TcMYB genes were distributed on 10 chromosomes. We conducted a synteny analysis to understand the evolution of the cacao R2R3-MYB gene family. A total of 37 gene pairs of TcMYB genes were identified through tandem or segmental duplication events. Additionally, we also predicted the subcellular localization and physicochemical properties. All the studies showed that TcMYB genes have multiple functions, including responding to environmental stresses. The results provide an understanding of R2R3-MYB in Theobroma cacao and lay the foundation for a further functional analysis of TcMYB genes in the growth of cacao.
... Besides ERF1 and WRKY33, several other transcription factors including MYB51, MYB122, ERF72, and NAC042 are also involved in the induction of camalexin biosynthesis in response to pathogen attack (Saga et al., 2012;Frerigmann et al., 2015;Yang et al., 2020;Li et al., 2022). Additionally, a recent study reports that the histone modificationmediated epigenetic activation of camalexin biosynthetic genes is implicated in the induction of pathogenresponsive camalexin biosynthesis (Zhao et al., 2021). ...
Article
Camalexin, an indolic antimicrobial metabolite, is the major phytoalexin in Arabidopsis thaliana, and plays a crucial role in pathogen resistance. Our previous studies revealed that the Arabidopsis mitogen-activated protein kinases MPK3 and MPK6 positively regulate pathogen-induced camalexin biosynthesis via phosphoactivating the transcription factor WRKY33. Here, we report that the ethylene and jasmonate (JA) pathways act synergistically with the MPK3/MPK6-WRKY33 module at multiple levels to induce camalexin biosynthesis in Arabidopsis upon pathogen infection. The ETHYLENE RESPONSE FACTOR1 (ERF1) transcription factor integrates the ethylene and JA pathways to induce camalexin biosynthesis via directly upregulating camalexin biosynthetic genes. ERF1 also interacts with and depends on WRKY33 to upregulate camalexin biosynthetic genes, indicating that ERF1 and WRKY33 form transcriptional complexes to cooperatively activate camalexin biosynthetic genes, thereby mediating the synergy of ethylene/JA and MPK3/MPK6 signaling pathways to induce camalexin biosynthesis. Moreover, as an integrator of the ethylene and JA pathways, ERF1 also acts as a substrate of MPK3/MPK6, which phosphorylate ERF1 to increase its transactivation activity and therefore further cooperate with the ethylene/JA pathways to induce camalexin biosynthesis. Taken together, our data reveal the multilayered synergistic regulation of camalexin biosynthesis by ethylene, JA, and MPK3/MPK6 signaling pathways via ERF1 and WRKY33 transcription factors in Arabidopsis.
Chapter
Plants are known to synthesize a plethora of secondary metabolites viz., terpenoids, terpenes, flavonoids and alkaloids. Of these, alkaloids belong to a major class of phytoconstituents, which are responsible for many properties of therapeutic interest such as analgesic, antimicrobial, antimalarial, antipyretic, antihypertensive, cardioprotective, anticancer and antiarrhythmic. Consequently, plants possess several biosynthetic pathways which are critical for alkaloid biosynthesis. The recent involvement of commercial interest has triggered the exploration of techniques for altering the production of alkaloids. Moreover, the amount of natural production of alkaloids is low and vulnerable due to the dependency on climatic conditions. Considering the above facts, different techniques such as transcription factors plant tissue culture, miRNA-mediated manipulation of these secondary metabolites, gene editing by CRISPR/Cas9, and nanoparticles (NPs)-based enhancement are being extensively used to stabilize and enhance alkaloid production for the large-scale use at the industrial level. Additionally, a detailed understanding of alkaloid biosynthetic pathway genes, transcription factors and their mode of action is essential for the improved production of important alkaloids. This chapter is focussed on reviewing a set of biotechnological tools that are the potential candidates for improved biosynthesis of different alkaloids, which can further revolutionize the pharmaceutical industry.
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Main Conclusion This review provides an overview on the role of camalexin in plant immunity taking into account various plant-pathogen and beneficial microbe interactions, regulation mechanisms and the contribution in basal and induced plant resistance. Abstract In a hostile environment, plants evolve complex and sophisticated defense mechanisms to counteract invading pathogens and herbivores. Several lines of evidence support the assumption that secondary metabolites like phytoalexins which are synthesized de novo, play an important role in plant defenses and contribute to pathogens’ resistance in a wide variety of plant species. Phytoalexins are synthesized and accumulated in plants upon pathogen challenge, root colonization by beneficial microbes, following treatment with chemical elicitors or in response to abiotic stresses. Their protective properties against pathogens have been reported in various plant species as well as their contribution to human health. Phytoalexins are synthesized through activation of particular sets of genes encoding specific pathways. Camalexin (3’-thiazol-2’-yl-indole) is the primary phytoalexin produced by Arabidopsis thaliana after microbial infection or abiotic elicitation and an iconic representative of the indole phytoalexin family. The synthesis of camalexin is an integral part of cruciferous plant defense mechanisms. Although the pathway leading to camalexin has been largely elucidated, the regulatory networks that control the induction of its biosynthetic steps by pathogens with different lifestyles or by beneficial microbes remain mostly unknown. This review thus presents current knowledge regarding camalexin biosynthesis induction during plant-pathogen and beneficial microbe interactions as well as in response to microbial compounds and provides an overview on its regulation and interplay with signaling pathways. The contribution of camalexin to basal and induced plant resistance and its detoxification by some pathogens to overcome host resistance are also discussed.
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By means of yeast two-hybrid screening we identified bHLH05 as an interacting partner of MYB51 - the key regulator of indolic glucosinolates (IGs) in Arabidopsis. Furthermore we show that bHLH04, bHLH05 and bHLH06/MYC2 also interact with other R2R3-MYBs regulating glucosinolate (GSL) biosynthesis. Analysis of bhlh loss-of-function mutants revealed that the single bhlh mutants retained GSL levels that were similar to those in wild-type plants, whereas the triple bhlh04/05/06 mutant was depleted in the production of GSL. Unlike bhlh04/06 and bhlh05/06 mutants, the double bhlh04/05 mutant was strongly affected in the production of GSL, pointing to a special role of bHLH04 and bHLH05 in the control of GSL levels in the absence of JA. The combination of two specific gain-of-function alleles of MYB and bHLH proteins had an additive effect on GSL levels, as demonstrated by the analysis of the double MYB34-1D bHLH05D94N mutant, which produces 20-fold more IGs than bHLH05D94N and Col-0. The amino acid substitution D94N in bHLH05D94N negatively affects the interaction with JASMONATE-ZIM DOMAIN (JAZ) protein, resulting thereby in constitutive activation of bHLH05 and mimicking JA treatment. Our study revealed the bHLH04, bHLH05 and bHLH06/MYC2 factors as novel regulators of GSL biosynthesis in Arabidopsis
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Wounding in multicellular eukaryotes results in marked changes in gene expression that contribute to tissue defense and repair. Using a cDNA microarray technique, we analyzed the timing, dynamics, and regulation of the expression of 150 genes in mechanically wounded leaves of Arabidopsis. Temporal accumulation of a group of transcripts was correlated with the appearance of oxylipin signals of the jasmonate family. Analysis of the coronatine-insensitive coi1-1 Arabidopsis mutant that is also insensitive to jasmonate allowed us to identify a large number of COI1-dependent and COI1-independent wound-inducible genes. Water stress was found to contribute to the regulation of an unexpectedly large fraction of these genes. Comparing the results of mechanical wounding with damage by feeding larvae of the cabbage butterfly (Pieris rapae) resulted in very different transcript profiles. One gene was specifically induced by insect feeding but not by wounding; moreover, there was a relative lack of water stress–induced gene expression during insect feeding. These results help reveal a feeding strategy of P. rapae that may minimize the activation of a subset of water stress–inducible, defense-related genes.
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In Arabidopsis thaliana a number of defense-related metabolites are synthesized via indole-3-acetonitrile (IAN), including camalexin and indole-3-carboxylic acid (ICOOH) derivatives. CYP71A13 is a key enzyme for camalexin biosynthesis and catalyzes the conversion of indole-3-acetaldoxime (IAOx) to IAN. The CYP71A13 gene is located in tandem with its close homolog CYP71A12, also encoding an IAOx dehydratase. However, for CYP71A12 indole-3-carbaldehyde (ICHO) and cyanide were identified as major reaction products. To clarify CYP71A12 function in vivo and to better understand the IAN metabolism, we generated two cyp71a12 cyp71a13 double knockout mutant lines. CYP71A12-specific Transcription Activator-Like Effector nucleases (TALENs) were introduced into the cyp71a13 background and very efficient somatic mutagenesis was achieved. We observed stable transmission of the cyp71a12 mutation to the following generations, which is a major challenge for targeted mutagenesis in Arabidopsis. In contrast to cyp71a13 plants, in which camalexin accumulation is partially reduced, double mutants synthesized only traces of camalexin, demonstrating that CYP71A12 contributes to camalexin biosynthesis in leaf tissue. A major role of CYP71A12 was identified for inducible biosynthesis of ICOOH. Specifically, the ICOOH methyl ester was reduced to 12% of wild type level in AgNO3 challenged cyp71a12 leaves. In contrast, ICHO derivatives apparently are synthesized via alternative pathways, such as degradation of indole glucosinolates. Based on these results we present a model for this surprisingly complex metabolic network with multiple IAN sources and channeling of IAOx-derived IAN into camalexin biosynthesis. In conclusion, TALEN-mediated mutation is a powerful tool for functional analysis of tandem genes in secondary metabolism. Copyright © 2015, Plant Physiology.