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Viral pathogens comprise approximately half of the emerging diseases in plants, and plant introductions (including the international movement of seed) are considered to be one of the most important contributing factors to the emergence of these pathogens. For the most part plant viruses are incapable of surviving outside of host tissue making their long-term propagation dependent on their hosts. Thus infected seeds are an effective strategy that not only allows for pathogen survival from one season to the next, but also for their dispersal. The Potyviridae, as the largest plant virus family, is often considered to be the most economically important and its members rank among the most successful plant pathogens. Seed transmission within the Potyviridae family is not uncommon, however the exact mechanism of viral entry into the germ line is currently unknown, and the genetic basis of seed transmission has yet to be completely elucidated. Seed transmission rates are influenced by complex interactions among a variety of factors including the host cultivar, the virus isolate, environmental conditions, the timing of infection, vector characteristics, and viral synergism. Seed transmission can have an enormous effect on the epidemiology of crop pathogens due in part to the ecology of plant viruses which are often secondarily disseminated via insect vectors with the effect that extremely low frequencies of seed transmission can result in devastating epidemics. This is compounded by the fact that vertically infected seedlings often do not exhibit symptoms of viral infection. Given the potential for seed transmitted viral pathogens to initiate epidemics, it is vital to understand how seed transmission rates translate into epidemics. In addition, as seed transmission is a means of dispersal for these viral pathogens, effective phytosanitary measures to control the spread of these pathogens are crucial.
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Chapter 1
Seed Transmission in the Potyviridae
Heather E. Simmons and Gary P. Munkvold
Abstract Viral pathogens comprise approximately half of the emerging diseases in
plants, and plant introductions (including the international movement of seed) are
considered to be one of the most important contributing factors to the emergence of
these pathogens. For the most part plant viruses are incapable of surviving outside
of host tissue making their long-term propagation dependent on their hosts. Thus
infected seeds are an effective strategy that not only allows for pathogen survival
from one season to the next, but also for their dispersal. The Potyviridae, as the
largest plant virus family, is often considered to be the most economically impor-
tant and its members rank among the most successful plant pathogens. Seed
transmission within the Potyviridae family is not uncommon, however the exact
mechanism of viral entry into the germ line is currently unknown, and the genetic
basis of seed transmission has yet to be completely elucidated. Seed transmission
rates are influenced by complex interactions among a variety of factors including
the host cultivar, the virus isolate, environmental conditions, the timing of infec-
tion, vector characteristics, and viral synergism. Seed transmission can have an
enormous effect on the epidemiology of crop pathogens due in part to the ecology
of plant viruses which are often secondarily disseminated via insect vectors with the
effect that extremely low frequencies of seed transmission can result in devastating
epidemics. This is compounded by the fact that vertically infected seedlings often
do not exhibit symptoms of viral infection. Given the potential for seed transmitted
viral pathogens to initiate epidemics, it is vital to understand how seed transmission
rates translate into epidemics. In addition, as seed transmission is a means of
dispersal for these viral pathogens, effective phytosanitary measures to control
the spread of these pathogens are crucial.
Keywords Epidemiology • Seed infection • Seed-to-seedling transmission
Potyviridae • Virus
Given that approximately 90 % of the food crops grown worldwide are propagated
from seed (Maude 1996) it is hardly surprising that seed transmitted pathogens
H.E. Simmons • G.P. Munkvold (*)
Seed Science Center, Iowa State University, Ames, IA 50010, USA
e-mail: munkvold@iastate.edu
©Springer Science+Business Media Dordrecht 2014
M.L. Gullino, G. Munkvold (eds.), Global Perspectives on the Health of Seeds and
Plant Propagation Material, Plant Pathology in the 21st Century 6,
DOI 10.1007/978-94-017-9389-6_1
3
would be a significant concern for both growers and industry alike. Seed transmis-
sion is an effective strategy for pathogens, especially viruses, to maintain their
populations in host plants. In 1972, K.F. Baker wrote, “Seed transmission is now
recognized as the method par excellence by which plant pathogens (a) are intro-
duced into new areas, (b) survive periods when the host is lacking, (c) are selected
and disseminated as host-specific strains, and (d) are distributed through the plant
population as foci of infection” (Baker 1972). Most viruses are unable to survive for
any length of time outside host issue, making long-term perpetuation of viruses
particularly difficult, especially for those that infect annual plants. Seed infection is
an effective mechanism to overcome this, so that the long-term survival of the
pathogen is linked to the host (Stacie-Smith and Hamilton 1988). This mechanism
allows not only for the survival of the pathogen from one season to the next, but also
for the long distance dissemination of the pathogen via infected seed (Albrechtsen
2006). One such example is Wheat streak mosaic virus (WSMV) for which phylo-
genetic studies suggest that the introduction of this virus and its subsequent
distribution within Australia was likely via imported seed (Dwyer et al. 2007).
Approximately 20 % of all plant viruses are seed transmitted (Mink 1993), and it
is believed that approximately one third of plant viruses will eventually be shown to
be seed transmitted (Stacie-Smith and Hamilton 1988). Currently 231 viruses are
believed to be seed transmitted (Sastry 2013), with 13 % of these being members of
the Potyviridae (See Table 1.1 for a list of seed transmitted Potyviridae). Among
the viruses that infect plants the Potyviridae is the largest family, and as a result are
often considered to be the most economically important (Berger 2001). This family,
and in particular the aphid-transmitted members, are among the most successful
plant pathogens (Rybicki and Pietersen 1999). Some of the most important crop
pathogens are members of the Potyviridae, including Bean common mosaic virus
(BCMV), Maize dwarf mosaic virus,Lettuce mosaic virus (LMV), Plum pox virus
(PPV), Potato virus Y (PVY), WSMV, and Zucchini yellow mosaic virus (ZYMV)
(Berger 2001).
The Potyviridae is composed of eight genera: Brambyvirus,Bymovirus,
Ipomovirus,Macluravirus,Poacevirus,Potyvirus,Rymovirus, and Tritimovirus.
In addition, there is one as yet unassigned group, which consists of two viruses
(Spartina mottle virus and Tomato mild mottle virus). These genera have a com-
bined total of 203 species with the Potyvirus group being the largest, comprising
146 members (International Committee on Taxonomy of Viruses, 2012). The
classification is based on shared characteristics; all have positive sense RNA
genomes, all save one (Bymovirus) are monopartite, and they share a gene order
as well as sequence homology. The genomes of all members have a VPg (viral
protein genome-linked) covalently linked to the 50end and a polyadenylated 30end.
They also all share the presence of the distinctive pinwheel inclusion bodies of the
Cylindrical Inclusion (CI) protein. Genera and species are differentiated based on
sequence identity, host range, transmission mode, cytopathology, vector transmis-
sion and antigenic properties (King et al. 2012;Lo
´pez-Moya et al. 2001).
Averaged estimates in the late 1990s of worldwide crop losses due to viruses
were between 1 and 7 % depending on the crop species (Oerke and Dehne 2004).
4 H.E. Simmons and G.P. Munkvold
However the economic impact of individual viral epidemics can be enormous. For
example, yield losses of up to 98.7 % have been reported for WSMV (Edwards and
Mcmullen 1988), and annual losses in Kansas alone due to WSMV have exceeded
$30 million (Jons et al. 1981). PVY yield losses range from 10 % and 80 %
(Valkonen 2007), and the global economic impact of PPV over a 20 year period
is estimated to be 576 million Euros (Cambra et al. 2006). Given the current
increase in emerging pathogens that is occurring these figures are likely to increase.
Emerging viral pathogens are significant and constitute 47 % of emerging diseases
in plants, with plant introductions (including the international movement of seed)
being thought to be one of the most important contributing factors to their
Table 1.1 Seed transmitted Potyviridae, their acronyms, and their important hosts
a
Virus Acronym Important Host (Genus)
Artichoke latent virus ArLV Cynara
Bean common mosaic BCMV Phaseolus,Vigna
Bean yellow mosaic BYMV Lupinus,Vicia,Pisum,Melilotus
Blackeye cowpea mosaic BICM Vigna
Cassia yellow spot CasYSV Cassia
Cowpea aphid-borne Mosaic CABMV Glycine,Phaseolus
Cowpea green vein banding virus CGVBV Phaseolus,Vigna
Desmodium mosaic DesMV Desmodium
Guar symptomless GSLV Cyamopsis
Hippeastrum mosaic HiMV Hippeastrum
Leek yellow stripe LYSV Allium
Lettuce mosaic LMV Lactuca,Senecio
Maize dwarf mosaic MDMV Zea
Mungbean mosaic MbMV Vigna
Onion yellow dwarf OYDV Allium
Papaya ringspot PRSV Carica
Pea seedborne mosaic PSbMV Pisum
Peanut mottle PeMoV Arachis,Glycine,Vigna,Voandzeia
Peanut stripe PStV Arachis,Glycine,Vigna
Plum pox PPV Prunus
Potato Y PVY Solanum
Soybean mosaic SMV Glycine,Lupinus,Phaseolus
Sugarcane mosaic SCMV Zea
Sunflower mosaic SuMV Helianthus
Telfairia mosaic TeMV Telfairia
Tobacco etch TEV Nicotiana,Solanum,Capsicum
Turnip mosaic TuMV Raphanus
Watermelon mosaic WMV Cucumis,Echinocystis
Wheat streak mosaic WSMV Triticum
Zucchini yellow mosaic ZYMV Cucurbita,Ranunculus
Adapted from Singh and Mathur (2004). Data from Mink (1993), Sastry (2013) and Albrechtsen
(2006)
1 Seed Transmission in the Potyviridae 5
emergence (Anderson et al. 2004). Other reasons for this increase include conver-
sion of natural vegetation to agriculture, climate change as well as an expansion in
trade and globalization (Jones 2009). Global warming is likely to affect the rate at
which plant RNA viruses evolve as RNA replication is affected by temperature as
are plant defenses (Elena 2011). In addition, climate change will undoubtedly
influence the geographical distribution of crops and plants in natural ecosystems,
and by extension their pathogens and vectors. Warming trends are expected to
change the distribution, winter survival and spring arrival of insect vectors (Ander-
son et al. 2004), potentially affecting viral epidemics, and this has already been
observed, for example, with Barley yellow mosaic virus (Coakley et al. 1999). The
human population is estimated to reach nine billion by 2050 (Cohen 2003), and the
Food and Agriculture Organization estimates that global food production will need
to increase by 60 % by 2050 (Alexandratos and Bruinsma 2012). As agricultural
intensification is thought to expedite the establishment and spread of emerging
viruses (Elena 2011) it is extremely likely that we will continue to see an increase in
emerging viral pathogens. Given that seed transmission is instrumental in the
epidemiology of viral diseases, as it serves as a means of dispersal, both as seeds
and as an initial source of infection for vector dispersal (Mink 1993), the need to
establish rigorous phytosanitary measures for these viral pathogens will become
increasing important.
1 Mechanisms of Seed Transmission
Although seed transmission within the Potyviridae family is not unusual, the
mechanism by which the virus enters the germ line is currently unknown. However,
two possible routes of embryonic infection have been postulated: direct invasion of
the embryonic tissue after fertilization, or infection of the gametes prior to fertil-
ization, either through the ovules or via pollen. In addition, it has been suggested
that the seed transmission rate may be a sum of both indirect and direct embryotic
invasion (Wang and Maule 1994). Plant viruses differ from animal viruses in the
sense that movement of animal viruses into the cell is via receptor-mediated
mechanisms, with the effect that these viruses can exploit the extracellular envi-
ronment. Plant viruses, in contrast, are restricted to the intracellular compartments
of the host and cell-to-cell movement is regulated by the plasmodesmata (Maule
and Wang 1996). Several viral proteins are involved in cell-to-cell movement and it
is thought that the Coat Protein (CP) binds to the viral RNA and alters the exclusion
size limit of the plasmodesmata. This phenomenon is thought to follow the infec-
tion front and is transient (Heinlein et al. 1995; Oparka et al. 1997). The helper
component protein (HC-Pro) is thought to increase plasmodesmal permeability
(Rojas et al. 1997), and the CI is believed to guide the CP-RNA complex to the
plasmodesmata (Rodriguez-Cerezo et al. 1997). In order for systemic infection to
occur, the virus must enter the vascular tissue. The virus moves from the mesophyll
cells and through a series of cells, which are the perivascular parenchyma, the
6 H.E. Simmons and G.P. Munkvold
phloem parenchyma, the companion cells, and finally into the sieve tube elements
(Astier et al. 2001). In the Potyviridae the CP is necessary for viral movement
within host plant tissues, and it is thought that the HC-Pro functions in aiding the
entry and exit of the virus into and out of the host vascular system (Urcuqui-
Inchima et al. 2001). Viral movement through the plant is directed in the sense
that it moves with the carbon metabolites that are transported from the source leaves
to the sink immature leaves; in other words, viral movement follows the same path
as the photoassimilates (Maule and Wang 1996).
The viral genetic basis of seed transmission has yet to be completely determined;
however it appears that a number of viral genes are involved in seed transmission.
Chimeras of transmissible and nontransmissible strains of Pea seedborne mosaic
virus (PSbMV) revealed that the 50untranslated region (UTR), the HC-Pro and the
CP region of the potyvirus genome may be involved in the seed transmission of this
virus (Johansen et al. 1996). The CI may also be involved in seed transmission and
in PSbMV infections; cylindrical inclusions were observed over plasmodesmatal
openings at the testa-endosperm boundary wall (Roberts et al. 2003). Notably all of
the proteins thought to be involved in seed transmission are also involved in viral
movement save one (the 50UTR). When considering seed transmission, the mode of
virus movement within the plant will have an enormous effect on the potential for
vertical transmission, and phloem limited viruses are generally not seed transmis-
sible (Mink 1993).
Evidence for the direct invasion of the embryo is derived from work with
PSbMV. There is some evidence in PSbMV that the virus uses the suspensor as a
mode of entry into the embryonic tissues. After fertilization, the zygote undergoes
an asymmetrical cell division, resulting in a small apical cell, which will become
the embryo and a larger basal cell (the suspensor). In pea the suspensor provides
nutrients for the growing embryo from the endosperm and appears to be anchored
close to the micropyle (a tiny opening in the ovule through which the pollen tube
enters) during the early stages of seed development (Wang and Maule 1994). It is
believed that embryonic invasion occurs as a result of viral movement from the
maternal cells in the micropyle to the endospermic cytoplasm and embryonic
suspensor from where it invades the embryo (Roberts et al. 2003). Given that the
embryonic suspensor undergoes a programmed cell death, the ability of the virus to
gain entry into the embryo in this manner is transient (Wang and Maule 1994), and
thus it appears that seed transmission of viral pathogens in this manner is dependent
at least partially on timing and/or chance (Roberts et al. 2003).
Seed infection can occur via pollen although the frequency of transmission to
seedlings through pollen is generally thought to be less than through the ovules
(Mink 1993). Evidence for the indirect invasion of the embryo via the ovules is
fairly extensive and has been demonstrated for viruses in families other than the
Potyviridae (e.g., Tobacco ringspot virus (Secoviridae) (Yang and Hamilton 1974),
Barley stripe mosaic virus (Vigraviridae) (Carroll and Mayhew 1976), Cucumber
Mosaic virus (Bromoviridae) (Yang et al. 1997), and Turnip yellow mosaic
(Tymoviridae) (de Assis Filho and Sherwood 2000). With respect to the Potyviridae
the evidence for seed transmission via the ovules is substantially less than for other
1 Seed Transmission in the Potyviridae 7
viral families and in some instances is contradictory, for example, in LMV, there
are studies indicating that the seed transmission of this virus does occur through the
ovules (Ryder 1964), and others reporting that it does not (Hunter and Bowyer
1994). However there is some evidence of indirect invasion via pollen in a number
of Potyviridae members, for example, in LMV (Hunter and Bowyer 1997; Ryder
1964) using electron microscopy and immunogold labeling LMV was found to
infect the pollen mother cells (Hunter and Bowyer 1997). Serological work with
PSbMV revealed that the virus was present in pollen in seed transmissible variants
but was absent from these tissues in non seed transmissible isolates (Kohnen
et al. 1995). For some viruses, such as BCMV, there is evidence that direct invasion
of the embryo may occur through both the pollen and the ovules (Schippers 1963;
Medina and Grogan 1961). The seed to seedling transmission rate of Sugarcane
mosaic virus (SCMV) is postulated to be a sum of the direct invasion of the embryo
and indirect invasion of infected pollen. The overall seed to seedling transmission
rate of SCMV in maize was determined to be 4.81 % and the rate of transmission as
a result of infected pollen grains was 0.04–0.10 % (Li et al. 2007).
There is a distinction between viruses that infect the embryo versus those that are
found in other seed tissues or remain as contaminants on the seed surface. This is
significant because embryo infection can readily result in seedling infection while
viral infection of other seed parts will only result in seedling infection if the virus is
easily transmitted mechanically and is resistant to inactivation. Viruses present on
or near the seed surface are often eliminated by heat or chemical treatments and this
is in direct contrast to embryonic infection where the treatments to inactivate the
virus would potentially also kill the embryo (Stacie-Smith and Hamilton 1988).
Seed transmission as a result of the virus being carried on the seed surface is fairly
uncommon (Johansen et al. 1994) and has not been demonstrated in the
Potyviridae. Examples of this mode of transmission include members of the
tabomoviruses, with the only outside member being Southern bean mosaic virus
(Sobemovirus). It would thus appear that the bulk of viruses that are seed-
transmitted are carried within the embryo (Albrechtsen 2006).
2 Factors That Influence Seed Transmission
There are a number of factors that influence seed transmission rates and these
include the host cultivar, the virus isolate, interactions with the environment, the
timing of infection and viral synergism. It has been postulated that whether or not
seed transmission occurs is primarily affected by host-virus interactions and the
timing of infection with environment playing a lesser role (Mink 1993). In addition,
the relation of the virus to its vector may have an effect on seed transmission and
viruses that are horizontally transmitted in a persistent manner are typically not
seed transmitted whereas those transmitted nonpersistently tend to be seed trans-
mitted (Bennett 1969).
8 H.E. Simmons and G.P. Munkvold
Different cultivars within a species can vary in their seed transmission rates. For
instance, using LMV the incidence of seed transmission ranged from 1 % to 8 %
depending on the variety of lettuce (Grogan and Bardin 1950). Similarly an
investigation of seed transmission of PSbMV in 38 pea cultivars revealed that
five of these exhibited no seed transmission whatsoever (Stevenson and Hagedorn
1973). This varietal variation in seed transmission may have a genetic basis and in
soybean seed transmission of Soybean mosaic virus (SMV) appears to be a poly-
genic trait and a number of genes are necessary for high rates of transmission
(Domier et al. 2011). Transmission of different isolates of the same virus can also
vary within a single host. For instance work with Peanut mottle mosaic virus
(PeMoV) revealed differences in the frequency of seed transmission as a function
of virus isolate (Adams and Kuhn 1977). Similarly within PSbMV there are both
transmissible and nontransmissible isolates (Roberts et al. 2003). An investigation
of 14 bean cultivars and four virus isolates showed that seed transmission of BCMV
was influenced by both isolate strain as well as the host cultivar (Morales and
Castano 1987). Seed transmission rates may also be influenced by the interaction of
host cultivar and virus isolate. An investigation of eight soybean cultivars and seven
SMV isolates (Tu 1989) found that the interaction between host cultivar and virus
isolate resulted in the seed transmission rate varying from zero to 70 %; a resistant
cultivar had overall lower seed transmission than the susceptible cultivar, but at
least one SMV strain was seed-transmitted at a higher rate in the resistant cultivar.
The environment can affect seed transmission rates and studies using SMV
elucidated that temperature had an effect on seed transmission in soybean.
Although virus symptoms on the mother plants were most severe when plants
were grown at 25 C, seed transmission was optimal when the plants were grown
at 20 C (average 48 %) and seed transmission decreased at 15 C (average 7 %)
and 25 C (average 9.7 %) (Tu 1992). Work with PSbMV determined that reduced
rainfall decreased the incidence of virus in the field because it resulted in a delay of
the vector (Coutts et al. 2009). Thus the risk associated with a given level of seed
infection was dependent on conditions before and after planting. It is apparent that
the factors influencing seed transmission rates are complex, as suggested by Maule
and Wang (1996), and are the result of multifaceted interactions between the host,
virus, vector and environment.
The seed transmission rate can be greatly influenced by the age of the host
(flowering) at the time of inoculation. Seed transmission rates appear to be
inversely related to the age of the plant (and/or developmental stage) upon infection
(Wang and Maule 1992). In SMV a reduction in seed transmission of 13 % (16–
3 %) was seen after the onset of flowering (Bowers and Goodman 1979). Likewise
the date of inoculation was seen to influence the incidence of seed transmission in
BCMV with the effect that seed transmission increased significantly if inoculation
occurred within the first 20 days of the vegetative period of the host. In the same
study, only 2 of 14 bean cultivars exhibited seed transmission if inoculation
occurred more than 30 days after sowing (Morales and Castano 1987). Other
Potyviridae for which the age of the host appears to affect seed transmission rates
1 Seed Transmission in the Potyviridae 9
include PSbMV (Wang and Maule 1992), BCMV (Kaiser and Mossaheb 1974) and
PeMoV (Paguio and Kuhn 1974).
Synergism can affect seed transmission rates although the direction of influence
appears to vary, for instance, co-infections of PSbMV with Pea early browning
virus (PEBV) (Virgaviridae) resulted in seed transmission being blocked in PSbMV
although it was unaffected in PEBV (Wang and Maule 1997). For viruses in other
families a synergistic effect that increases the rate of seed transmission has been
reported e.g. Turnip yellow mosaic virus (Tymoviridae) (de Assis Filho and
Sherwood 2000), and Southern bean mosaic virus (Sobemovirus) (Kuhn and
Dawson 1973).
3 Seed to Seedling Transmission
Although the majority of seed transmission events require embryonic infection,
embryo infection itself does not necessarily result in seedling infection. In fact the
discrepancy between seed infection rates and seed to seedling transmission rates
can vary greatly. For instance in ZYMV the seed infection rate was significantly
higher (21.9 %) than the seed to seedling transmission rate (1.8 %) (Simmons
et al. 2013). Similar results were found with LMV (Hunter and Bowyer 1993).
However, there are instances where the whole seed-assay matches up with the seed
transmission rate, for example in SMV (Bowers and Goodman 1979) and Peanut
stripe virus (Xu et al. 1991), but this does not appear to be the norm (Albrechtsen
2006). One possible explanation for this is that inactivated viruses can occur in parts
of the seed other than the embryo, with the effect that the virus is still detectable via
serological or molecular methods. In these instances testing the whole seed for the
virus will lead to an overestimation of the actual seed transmission rate. For viruses
that infect the embryo, the seed to seedling infection rate is going to be the result of
two factors: the first is the ability of the virus to survive in the embryo, and the
second is its ability to be reactivated (Albrechtsen 2006). It is believed that a virus
that has infected the embryo will remain viable for as long as the seed is viable
(Bennett 1969) and there are examples of extreme longevity of seeds and their
pathogens; BCMV has been shown to be able to survive and remain infectious for
30 years in seed (Pierce and Hungerford 1929).
Symptoms in seedlings are variable and appear to be dependent on the virus
strain, host genotype and environment (Albrechtsen 2006). For example, with
BCMV in some seedlings, viral symptoms did not appear until the second or
third trifoliate leaf (Kaiser and Mossaheb 1974). Vertically infected seedlings
often exhibit little to no symptoms of viral infection (Stacie-Smith and Hamilton
1988), and as a result visual inspection is frequently not the optimal method for
determining the incidence of seed transmission for these pathogens. Cucurbit
seedlings vertically infected with ZYMV demonstrated little to no visual symptoms
(Simmons et al. 2013; Muller et al. 2006; Gleason and Provvidenti 1990), while
slight symptoms have been observed in PSbMV (Hampton 1972). There may be a
10 H.E. Simmons and G.P. Munkvold
genetic basis for this and Illumina sequencing of ZYMV populations revealed that
the 50UTR is highly variable in the seed transmitted populations compared to those
transmitted horizontally. In this example the vertically transmitted populations
were symptomless in comparison to the horizontally transmitted populations
(Simmons et al. 2013). Likewise, studies with PPV determined that a deletion in
this region resulted in reduced symptom development (Simon-Buela et al. 1997)
and in BCMV an insertion in this region resulted in an increase in symptom severity
(Zheng et al. 2002).
For some members of the Potyviridae the presence of the virus in the seed does
not appear to affect germination rates, for instance in PSbMV (Hampton 1972), and
in BCMV (Raizada et al. 1990; Hao et al. 2003). For others, however, there does
appear to be an interaction between seed infection and low germination rate. This
could potentially lessen the effect of epidemics, as only a subset of virally infected
seeds will successfully initiate infections in subsequent generations. For instance in
ZYMV the germination rate of seeds extracted from fruits from infected parents
was 22.5 % versus 87.5 % for those harvested from non-infected parents (Simmons
et al. 2013). This could be due to a number of reasons. It is possible that the lower
germination rate could be the result of the effects of the pathogen on the mother
plant, or the virus could be reducing the viability of the seed. This was found with
SMV where infection severely reduced the seed yield. Viral infection reduced seed
yield on average 58.5 % among eight soybean cultivars inoculated with seven virus
isolates (Tu 1989). Similarly low numbers of viable seed were reported from
ZYMV infected plants (Desbiez and Lecoq 1997). It is also possible that the viral
titers in the seeds are simply too low to consistently initiate effective infections in
the subsequent generation. A determination of viral titers via qPCR revealed that
the titers of ZYMV were several orders of magnitude lower in the seed (11.3–
60 ng/μl) than in the leaf (2,000–3,400 ng/μl) (Simmons et al. 2013). Alternatively,
the viral population may be severely constrained by the host plant such that only a
subset of the viral population is transmitted from the seed to the seedling, or host
defense mechanisms, such as RNA silencing, may be eliminating the viral popula-
tion, or preventing it from being transmitted to the seedling. An investigation of the
numbers of infectious PSbMV particles that were subsequently transmitted to a
vertically infected seedling from the mother plant was on average only one,
suggesting that the bottleneck for this mode of transmission is very severe indeed
(Fabre et al. 2014).
The ecology of plant viruses is such that seed transmission can have an enor-
mous effect on the epidemiology of crop pathogens. This is due to the fact that the
majority of plant viruses are secondarily disseminated via insect vectors; therefore
small initial numbers of infected plants can lead to damaging epidemics (Maule and
Wang 1996). This is particularly important as many of the plant viral vectors
transmit nonpersistently, which means that insecticides are not effective at
suppressing secondary spread. This is due to the fact that both acquisition and
inoculation occur rapidly (within a few seconds), and thus the vector is not exposed
for a sufficiently long enough period of time for the pesticide to be effective in
reducing viral spread. As a result, the vector can often spread the virus to a
1 Seed Transmission in the Potyviridae 11
neighboring plant before it is negatively affected by an insecticide (Perring
et al. 1999). In addition the frequency at which seed transmission occurs may not
be a good predictor of the epidemiological significance of a virus, and even
extremely low transmission rates can initiate severe epidemics. For example
LMV at an incidence of 0.001 resulted in an epidemic as a result of secondary
spread via the insect vector (Ryder 1973). Similarly PeMoV at a seed transmission
of 0.1 % is sufficient in the epidemiology of this pathogen (Adams and Kuhn 1977).
Given the potential for seed transmitted viral pathogens to initiate epidemics and
the fact that viral pathogens are the most abundant group of emerging pathogens in
plants, it is vital to understand how seed transmission rates translate into epidemics.
There has been a lack of research examining the relationship between seed infection
levels on the development of viral epidemics and the resulting risk to crop yields.
This is vitally important for informing both seed industry as well as farmers (Jones
2000). Except for a few notable Potyviridae examples such as PSbMV, where
research resulted in a threshold value of >0.5 % seed infection (Coutts
et al. 2009), and LMV, for which a threshold of 0.1 % was established (Tomlinson
1962; Zink et al. 1956) very little quantitative work has been performed in this area.
Although not Potyviridae members an excellent example of determining threshold
levels was undertaken with two Bromoviridae (Cucumber mosaic virus and Alfalfa
mosaic virus). This study underscores the necessity of determining threshold levels
that are based on an examination of particular host-virus interactions, specific
geographic sites as well as year-to-year variations (Jones 2000). Given that differ-
ent viral pathogens will have different thresholds it is critical that this type of
research be conducted on individual virus-host pathosystems, as generalities cannot
be applied to specific cases.
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... a. Circulation of virus: seed transmission can be an important source of early and randomized primary infection foci within a crop field from which the virus spreads subsequently to other plants through vector transmission. These plants will subsequently act as secondary source of infection depending on their susceptibility (Maule and Wang, 1996;Simmons and Munkvold, 2014). Hence, sowing of the begomovirus-infected viable seed can introduce potent primary infection within the growing stand from where the whitefly can acquire and spread the disease rapidly to healthy plants, as shown in the case of TYLCV and ToLCNDV (Kil et al., 2016;Gomathi Devi et al., 2023). ...
... In such cases, seed-transmitted novel begomovirus variants and species may spread across the globe through seed trade and insect vectors and responsible for epidemics in host and non-host species under changing global climate scenario. Furthermore, seed infection provides the begomovirus with the means to persist for long periods of time when hosts and vectors are not available, as shown in other seedtransmitted viruses (Bos, 1977;Simmons and Munkvold, 2014). This facilitates virus emergence and re-emergence in plant populations (Hamelin et al., 2016;Pagan, 2019). ...
Article
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Begomoviruses (family Geminiviridae) are known for causing devastating diseases in fruit, fibre, pulse, and vegetable crops throughout the world. Begomoviruses are transmitted in the field exclusively through insect vector whitefly (Bemisia tabaci), and the frequent outbreaks of begomoviruses are attributed largely due to the abundance of whitefly in the agri-ecosystem. Begomoviruses being phloem-borne were known not be transmitted through seeds of the infected plants. The recent findings of seed transmission of begomoviruses brought out a new dimension of begomovirus perpetuation and dissemination. The first convincing evidence of seed transmission of begomoviruses was known in 2015 for sweet potato leaf curl virus followed by several begomoviruses, like bhendi yellow vein mosaic virus, bitter gourd yellow mosaic virus, dolichos yellow mosaic virus, mungbean yellow mosaic virus, mungbean yellow mosaic India virus, pepper yellow leaf curl Indonesia virus, tomato leaf curl New Delhi virus, tomato yellow leaf curl virus, tomato yellow leaf curl Sardinia virus, and okra yellow mosaic Mexico virus. These studies brought out two perspectives of seed-borne nature of begomoviruses: (i) the presence of begomovirus in the seed tissues derived from the infected plants but no expression of disease symptoms in the progeny seedlings and (ii) the seed infection successfully transmitted the virus to cause disease to the progeny seedlings. It seems that the seed transmission of begomovirus is a feature of a specific combination of host-genotype and virus strain, rather than a universal phenomenon. This review comprehensively describes the seed transmitted begomoviruses reported in the last 9 years and the possible mechanism of seed transmission. An emphasis is placed on the experimental results that proved the seed transmission of various begomoviruses, factors affecting seed transmission and impact of begomovirus seed transmission on virus circulation, outbreak of the disease, and management strategies.
... Viruses have detrimental effects on cowpea, especially those that are seed-borne and seed-transmitted. This is because seed transmission is responsible for most plant virus epidemics [42,49]. Seed-transmitted viruses have the ability to persist in the seed for a long period, once the seed is still viable [40,42]. ...
... This is because seed transmission is responsible for most plant virus epidemics [42,49]. Seed-transmitted viruses have the ability to persist in the seed for a long period, once the seed is still viable [40,42]. Seed transmission is the primary source of virus dissemination into new areas, eventually resulting in secondary spread by other means of transmission, such as insect vectors or mechanical contact [9]. ...
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Unlabelled: The study was conducted to characterise bean common mosaic virus strain Blackeye (BCMV-BICM) and determine the likelihood of seed transmission in cowpea breeding lines. F6 cowpea lines obtained from crosses between 'Ife-Brown' and 'IT-95 K-193-12' were planted at five locations in Southwest Nigeria for multilocational evaluation. Virus symptoms were observed on leaves of the breeding lines planted in Ibadan at eight weeks after planting. Enzyme-linked immunosorbent assay (ELISA) was used to determine the presence of six viruses: BCMV-BICM, cowpea aphid-borne mosaic virus, cucumber mosaic virus, cowpea mottle virus, southern bean mosaic virus and cowpea mild mottle virus. Seed transmission tests were carried out to determine virus transmission by seeds while growth and yield components of the cowpea lines were obtained. Reverse transcription polymerase chain reaction, sequencing and phylogenetic analyses were also used to characterise the BCMV-BICM isolates. The observed symptoms, leaf curling and mosaics, were typical of BCMV-BICM infection and ELISA results confirmed the presence of only BCMV-BICM. Line 'L-22-B' had the highest yield of 1653.9 kgha-1 followed by 'L-43-A' (1072 kgha-1). A non-significant relationship existed between the virus and germination parameters and similarly, the relationship between virus titres and yield parameters was not significant. Sequence analysis of the virus coat protein (CP) gene revealed the presence of three isolates with 96.87-97.47% nucleotide and 98.2-98.65% amino acid similarities and a 99.10-99.55% match with BCMV-BICM CP genes in GenBank. The deduced CP gene sequences showed unique changes at specific sites, while phylogenetic inferences revealed at least two separate origins for the isolates. Seed transmission is evident in all the cowpea breeding lines and 'L-22-B' and 'L-43-A' showed significant tolerance to BCMV-BICM. Thus, it is recommended that seeds from infected fields should not be used for further planting to prevent the introduction of viruses into new areas where their effect could be devastating in susceptible lines. Supplementary information: The online version contains supplementary material available at 10.1007/s13337-023-00812-3.
... Transmission of viruses through seed is affected by other factors (Sastry 2013c;Simmons and Munkvold 2014). The effect of strain in the transmission of the virus (Simmons and Munkvold 2014) is a key factor. ...
... Viruses, one of the most well-known plant pathogens, are passive invaders that spread from plant to plant mechanically, via invertebrates, fungal vectors, seeds, pollens, and soil [6,28]. In the epidemiology of diseases, transmission is a crucial factor [3,24]. ...
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Unlabelled: Pepper mild mottle virus (PMMoV), a Tobamovirus from Virgaviridae family, is highly contagious and transmitted by seeds as well as soil in nature. PMMoV has become a greater threat to capsicum cultivation worldwide. To develop an indigenous, rapid, and sensitive protocol for routine detection of PMMoV from seeds, the sensitivity of DAS-ELISA and RT-PCR was compared in the present study. The infected seeds of California Wonder were included in the study. Through DAS-ELISA the virus was successfully detected from 20 mg of seeds. However, using RT-PCR, we were able to detect the virus even from one infected seed with reproducibility. In the present study, vertical seed transmission of the test virus was investigated by employing a grow-out test under greenhouse conditions as well as directly through RT-PCR omitting the grow-out test in three capsicum cultivars. Based on symptoms observations in grow out test, seed transmission was observed in the 3 capsicum cultivars viz., California Wonder (63.04%), Yolo Wonder (33.80%) and Doux des LAndes (33.30%). Through RT-PCR it was estimated to be 55.56% (California Wonder), 28.96% (Yolo Wonder), and 40.64% (Doux des Landes), respectively. Thus, indicating 100% seed-to-seedling PMMoV transmission and reliability of RT-PCR in direct PMMoV detection from seeds. Even a small percentage of infected seed has the potential to greatly increase the PMMoV inoculum in the field and result in 100% plant infection. Therefore, we suggest using the established procedure for PMMoV detection right from the seed. Supplementary information: The online version contains supplementary material available at 10.1007/s13337-023-00807-0.
... Horizontal transmission is not the only way for virus dispersal. About 25% of all known plant viruses are vertically transmitted from parents to offspring through the seeds, seed transmission being a major component for the fitness of these viruses (Pagán, 2019;Simmons and Munkvold, 2014). Virus seed transmission may have a high impact in plant virus epidemiology (Pagán, 2022;Sastry, 2013) as it: (i) provides the virus with a means to persist for long periods of time when hosts or vectors are not available, as many seed-transmitted viruses can survive within the seed as long as it remains viable (Sastry, 2013). ...
Chapter
There is an increasing societal awareness on the enormous threat that climate change may pose for human, animal and plant welfare. Although direct effects due to exposure to heat, drought or elevated greenhouse gasses seem to be progressively more obvious, indirect effects remain debatable. A relevant aspect to be clarified relates to the relationship between altered environmental conditions and pathogen-induced diseases. In the particular case of plant viruses, it is still unclear whether climate change will primarily represent an opportunity for the emergence of new infections in previously uncolonized areas and hosts, or if it will mostly be a strong constrain reducing the impact of plant virus diseases and challenging the pathogen's adaptive capacity. This review focuses on current knowledge on the relationship between climate change and the outcome plant-virus interactions. We summarize work done on how this relationship modulates plant virus pathogenicity, between-host transmission (which include the triple interaction plant-virus-vector), ecology, evolution and management of the epidemics they cause. Considering these studies, we propose avenues for future research on this subject.
... Considering that all the plants used in this study for the vertical transmission assay were coinfected by YMMV and YaV1, we cannot exclude an antagonistic interaction between these two viruses that would limit the accumulation of YaV1 in infected plantlets and reduce its ability to be transmitted through tubers, nor can we rule out the possibility that the titer of YaV1 was too low within infected plants for this virus to be effectively transmitted through tubers. Nevertheless, host genetic factors have been shown to influence the vertical transmission of viruses in other vegetatively propagated crops, such as cassava and potato [50][51][52], and could play a similar role in yam. Despite YaV1 not being tubertransmitted, this virus was found at a very high prevalence in Guadeloupe, suggesting that it is vector-transmitted. ...
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Full-text available
The epidemiology of yam viruses remains largely unexplored. We present a large-scale epidemiological study of yam viruses in Guadeloupe based on the analysis of 1124 leaf samples collected from yams and weeds. We addressed the prevalence of cucumber mosaic virus (CMV), Cordyline virus 1 (CoV1), Dioscorea mosaic associated virus (DMaV), yam asymptomatic virus 1 (YaV1), yam mosaic virus (YMV), yam mild mosaic virus (YMMV), badnaviruses, macluraviruses and potexviruses, and the key epidemiological drivers of these viruses. We provide evidence that several weeds are reservoirs of YMMV and that YMMV isolates infecting weeds cluster together with those infecting yams, pointing to the role of weeds in the epidemiology of YMMV. We report the occurrence of yam chlorotic necrosis virus (YCNV) in Guadeloupe, the introduction of YMMV isolates through the importation of yam tubers, and the absence of vertical transmission of YaV1. We identified specific effects on some cropping practices, such as weed management and the use of chemical pesticides, on the occurrence of a few viruses, but no crop-related factor had a strong or general effect on the overall epidemiology of the targeted viruses. Overall, our work provides insights into the epidemiology of yam viruses that will help design more efficient control strategies.
... The apparent lack of seed transmission suggests that the emergence of ClYVV in soybean may be due to the virus being transmitted from host plants in the landscape to soybean genotypes that also happen to be susceptible. Seed transmission within the Potyviridae is not uncommon [74], however, we are not aware of reports that ClYVV is seed transmitted in other legumes. ...
Article
Full-text available
Background Viruses negatively impact soybean production by causing diseases that affect yield and seed quality. Newly emerging or re-emerging viruses can also threaten soybean production because current control measures may not be effective against them. Furthermore, detection and characterization of new plant viruses requires major efforts when no sequence or antibody-based resources are available. Methods In this study, soybean fields were scouted for virus-like disease symptoms during the 2016–2019 growing seasons. Total RNA was extracted from symptomatic soybean parts, cDNA libraries were prepared, and RNA sequencing was performed using high-throughput sequencing (HTS). A custom bioinformatic workflow was used to identify and assemble known and unknown virus genomes. Results Several viruses were identified in single or mixed infections. Full- or nearly full-length genomes were generated for tobacco streak virus (TSV), alfalfa mosaic virus (AMV), tobacco ringspot virus (TRSV), soybean dwarf virus (SbDV), bean pod mottle virus (BPMV), soybean vein necrosis virus (SVNV), clover yellow vein virus (ClYVV), and a novel virus named soybean ilarvirus 1 (SIlV1). Two distinct ClYVV isolates were recovered, and their biological properties were investigated in Nicotiana benthamiana , broad bean, and soybean. In addition to infections by individual viruses, we also found that mixed viral infections in various combinations were quite common. Conclusions Taken together, the results of this study showed that HTS-based technology is a valuable diagnostic tool for the identification of several viruses in field-grown soybean and can provide rapid information about expected viruses as well as viruses that were previously not detected in soybean.
Article
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Turkey is among the top 10 producers of cucumber, melon, watermelon, and squash in the world. Lately, seed-borne viruses have become a major issue in greenhouse and field-grown cucurbits. In this study, the incidence of kyuri green mottle mosaic virus (KGMMV) was determined in seeds from various species (cucumber, melon, watermelon, summer squash, bottle gourd, winter squash) of Cucurbitaceae. KGMMV detection in a total of 20 seed lots of each cucurbit species was done by enzyme-linked immunosorbent assay (ELISA) and RT-PCR. The highest virus incidence was 45% in melon followed by 25% in cucumber and 10% in squash. To the best of our knowledge, this is the first report of KGMMV in cucurbit crops in Turkey and this highlights the potential risk of KGMMV to commercial cucurbit seed lots.
Article
Seed transmission is a major mode for plant virus persistence and dispersal, as it allows for virus survival within the seed in unfavorable conditions and facilitates spread when they become more favorable. To access these benefits, viruses require infected seeds to remain viable and germinate in altered environmental conditions, which may also be advantageous for the plant. However, how environmental conditions and virus infection affect seed viability, and whether these effects modulate seed transmission rate and plant fitness, is unknown. To address these questions, we utilized turnip mosaic virus, cucumber mosaic virus, and Arabidopsis thaliana as model systems. Using seeds from plants infected by these viruses, we analyzed seed germination rates, as a proxy of seed viability, and virus seed transmission rate under standard and altered temperature, CO 2 , and light intensity. With these data, we developed and parameterized a mathematical epidemiological model to explore the consequences of the observed alterations on virus prevalence and persistence. Altered conditions generally reduced overall seed viability and increased virus transmission rate compared with standard conditions, which indicated that under environmental stress, infected seeds are more viable. Hence, virus presence may be beneficial for the host. Subsequent simulations predicted that enhanced viability of infected seeds and higher virus transmission rate may increase virus prevalence and persistence in the host population under altered conditions. This work provides novel information on the influence of the environment in plant virus epidemics. [Formula: see text] Copyright © 2023 The Author(s). This is an open access article distributed under the CC BY-NC-ND 4.0 International license .
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Mosaic-susceptible and -resistant lettuce cultivars and breeding lines were evaluated for seed transmission of the virus. Two methods of indexing were used: the seedling method, in which seedlings from infected plants were observed; and the Chenopodium method, in which a local lesion host, C. quinoa, was inoculated with seed samples ground in buffer solution. Susceptible lines transmitted at a rate averaging about 2% per plant. Over 90% of resistant lines failed to transmit the virus; the rest transmitted at extremely low rates, averaging 0.49% in one experiment. The parent plant’s environment appears to affect the transmission rate. Low day temperature results in a higher rate than high.
Book
Traduction anglaise de "Principes de virologie végétale; génome, pouvoir pathogène, écologie des virus" (Edition INRA, 2001)