Question
Asked 7th Feb, 2023

What is the equation to calculate the voltage and time for transferring proteins from a gel to the membrane in the western blot technique?

I try to find an equation for optimizing voltage and time in transferring proteins.

All Answers (3)

Malcolm Nobre
Advanced Centre for Treatment, Research and Education in Cancer
During blotting, the distance that must be travelled (gel thickness) between electrodes is much less than during separation, so lower voltage and lower field strength (volts/distance) are needed. On the other hand, the cross sectional area of current flow is much greater, so higher current is required.
Blotting power requirements depend on field strength (electrode size) and conductivity of transfer buffer. The higher these are, the higher the current requirement will be, although throughout the run, current drops as the ions in the buffer polarize. Therefore it is important to ensure that the power supply being used can accommodate the initial high current requirements. It is also important to have a well rectified power supply which ensures power will flow unidirectionally.
If the voltage is too low and transfer time too short, some protein will be left in the gel. If the voltage is too high, smaller proteins may pass through the membrane before they bind. If proteins are left in the gel after blotting under recommended conditions, then increasing the voltage by no more than 5 volts may be helpful. However, note that once SDS has been stripped from protein, longer transfer times or higher voltages will not help. Once bound, most proteins will remain on the membrane even during extended transfers.
The use of 25 V for 1-2 hours will transfer small proteins fairly effectively (up to about 50 kDa), and transferring at 30 V overnight (16 h), or even using a lower voltage such as 15 V will effectively transfer all proteins, regardless of the size. The main risk involved with the long transfer is transferring the small proteins through the membrane rather than on to it.
You could also refer to the paper attached below which may help in answering your question.
Best.
Phuttiphat Manarangtaweekul
Chulabhorn Graduate Institute
Dear Antonis Tsintarakis and Malcolm Nobre,
Thank you very much for your contribution
Sincerely,
Phuttiphat

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How to determine the optimal parameters for a semi-dry transfer ?
Question
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  • Petar D. PetrovPetar D. Petrov
I am working with 100-120kDa proteins that are expected not to transfer well from SDS-PAGE to a nitrocellulose during semi-dry transfer. However, since our lab doesn't have the wet-transfer cell, I have to get the most of what we have (Bio-Rad Semi-Dry blotter).
After reading various advice on constant amperage vs. constant volts, taking an account for the membrane surface, etc. , I reached to some combination of amperage/time, that gives me "good" transfer. I put the "", because I still have proteins left inside the gel (visualized by commmasie after the transfer), but at the same time I have some molecular weight marker (the one for 150kDa!) that gets onto the filter paper below the membrane.
So has anyone solved the "black box" equation of the semi-dry transfer, using a methodological optimization procedure to determine which are the best settings so that most of the protein of interest is out of the gel, but is on the membrane and is not below the membrane ? Please share.
For me using the molecular weight standard as an indicator of transfer is not relevant, because the total protein amount in 10 microliters of standard is usually about 3-5 micrograms. I was thinking about staining covalently somehow some cheap protein (like BSA) and simply tracking how much die I have left on the gel, on the membrane, and possibly - on a second, back-up membrane. What do you recommend?

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