The phylogenetic position for P. tabuliformis var. henryi according to the ML (maximum-likelihood) phylogenetic tree was constructed based on 33 chloroplast genomes. Ultrafast bootstrap values are shown below the nodes, with 1000 bootstrap replicates. All the complete chloroplast genome sequences are available in GenBank. The following sequences were used: Pinus tabuliformis isolate 55 MW551857, Pinus tabuliformis isolate 65 MW551867, Pinus tabuliformis var. henryi voucher Ph 22 MW537645, Pinus tabuliformis isolate 73 MW551875, Pinus tabuliformis var. henryi voucher Ph 70 MW537693, Pinus thunbergii MW599991 (Wakasugi et al. 1994), Pinus densata MT732337 (Li et al. 2021), Pinus yunnanensis MK007968, Pinus mugo KX833097 (Celiński et al. 2017), Pinus densiflora MF990371 (Xia et al. 2021), Pinus sylvestris KR476379, Pinus massoniana KC427272, Pinus taeda KY964286 (Asaf et al. 2018), Pinus rigida MZ424450 (Gernandt et al. 2018), Pinus echinata MZ424449, Pinus elliottii MK135066, Pinus caribaea OL679534, Pinus nelsonii EU998746 (Cronn et al. 2008), Pinus bungeana MW579775, Pinus gerardiana EU998741 (Cronn et al. 2008), Pinus cembra MN536531 (Schott et al. 2019), Pinus koraiensis AY228468, Pinus dabeshanensis KX255674 (Duan et al. 2016), Pinus fenzeliana OP747470, Pinus wangii MG897302, Pinus sibirica KT723438 (Baturina et al. 2019), Pinus morrisonicola MG897305, Pinus pumila MH046871 (Zeb et al. 2019), Pinus armandii MT644191 (Li et al. 2016), Pinus parviflora MG897304, Larix sibirica MF795085 (Bondar et al. 2019), and Larix kaempferi MF990369 (Kim et al. 2017).