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Surface temperature image over olive trees with different irrigation treatments. 

Surface temperature image over olive trees with different irrigation treatments. 

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Current high spatial resolution satellite sensors lack the spectral resolution required for many quantitative remote sensing applications and, given the limited spectral resolution, they only allow the calculation of a limited number of vegetation indices and remote sensing products. Additionally if short revisit time is required for management app...

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... INS/GPS data from the autopilot at the exact time of image acquisition is used to filter out the images acquired during turns and outside the region of interest, as well as images with excessive roll. The exterior orientation (EO) is used also as an initial approximation for the aerotriangulation (AT). In order to provide a good synchronization of the autopilot data (UTC time) and the image acquisition, a second GPS (model Copernicus, Trimble, USA) was used as time source. The image trigger was captured together to the UTC time from the auxiliary GPS receiver using a dedicated microcontroller. The pulse per second (PPS) signal from the GPS was used to ensure time accuracies better than 10ms. Automatic tie points are extracted using the SIFT algorithm (Lowe, 2004) and self made software. This algorithm has shown very robust results as compared with automatic tie point extraction with other photogrammetric software. The images are loaded together with the auxiliary data into the Leica Photogrammetric Suite (LPS, Leica Geosystems, Switzerland), where uniformly-distributed ground control points (GCP) were measured throughout the block. Once the model definition is complete it is possible to run the triangulation adjusting the weight assigned to EO, GCP and image measurements. When the AT is accepted it is possible to create the orthomosaic from the images using ready available high spatial resolution DEM. At present, orthomosaics of 600 images have been successfully generated following this methodology ( figure 7). Several airborne and field campaigns were performed with the multispectral camera using the six 10nm FWHM bands. The average flight height was 150 m yielding 20 cm ground resolution imagery. The Normalized Difference Vegetation Index (NDVI) (Rouse et al., 1974) was calculated to assess the estimation of crown leaf area index (cLAI) over a variety field of olive trees (figure 8a). Using an empirical relationship obtained by field measurements of cLAI showed good agreement ( r 2 =0.88, RMSE =0.13), allowing to map the field variability of cLAI for the different olive varieties (figure 8b). The Transformed Chlorophyll Absorption in Reflectance Index (TCARI) (Haboudane, 2002) normalized by the Optimized Soil-Adjusted Vegetation Index (OSAVI) (Rondeaux et al., 1996) to obtain TCARI/OSAVI is demonstrated to successfully minimize soil background and leaf area index variation in crops, providing predictive relationships for chlorophyll concentration estimation with narrow-band imagery in open tree canopy orchards (Zarco-Tejada et al., 2004). The leaf-level radiative transfer model PROSPECT (Jacquemoud & Baret, 1990) was linked with the canopy-level Forest LIGHT Interaction Model (FLIGHT) (North, 1996) and SAILH (Verhoef, 1984) to obtain predicting algorithms for chlorophyll concentration (Cab) from the airborne TCARI/OSAVI index. The comparison between field measured Cab in olive trees at the same variety field and airborne-estimated Cab yielded a RMSE of 4.2 μ g/cm2 and r 2 =0.89 (Berni et al., 2009) showing the capabilities of this system for estimating chlorophyll content at the crown level. The Photochemical Reflectance Index (PRI) (Gamon et al., 1992) was calculated to assess its potential capability for water stress detection from the UAV platform. The PRI index was calculated with the MCA-6 camera using additional 10 nm FWHM filters centered at 530 and 570 nm wavelengths. A flight was conducted over an experimental field of olive trees with deficit irrigation treatments (see Suárez et al., 2009). Water stress levels were quantified by comparing the image- derived PRI and the simulated non-stress PRI (sPRI) obtained through radiative transfer. PRI simulation was conducted using PROSPECT-FLIGHT and PROSPECT-SAILH radiate transfer models. The PRI values of the deficit irrigation treatments (figure 10) were consistently higher than the modelled PRI for the study sites, correlating well with tree xylem water potential ( r 2 =0.84), thus enabling the identification of individual water- stressed trees. Finally, thermal imagery of 40 cm spatial resolution was acquired over the same experimental field used for PRI validation (figure 11). The high spatial resolution allows isolating the tree crowns temperature from the soil and shadows enabling the retrieval of vegetation temperature. Canopy temperature yielded a relationship with water potential of r 2 =0.82 which suggest that this can be a valuable tool to track water stress on heterogeneous crops. This work demonstrated that it is possible to generate quantitative remote sensing products by means of a UAV equipped with commercial off-the-shelf (COTS) thermal and multispectral imaging sensors. Laboratory and field calibration methods provided 6-band 10 nm FWHM multispectral imagery with RMSE of 1.17% in ground reflectance and less that 0.2m spatial resolution. For the thermal camera, atmospheric correction methods based on MODTRAN radiative transfer model showed the successful estimation of surface temperature images of 40 cm spatial resolution, yielding RMSE < 1 K. Photogrammetric techniques were required to register the frame-based imagery to map coordinates. Cameras were geometrically characterized with their intrinsic parameters. These techniques along with position and attitude data gathered from the autopilot enabled the generation of large mosaics semi-automatically with minimum use of ground control points. Appropriate bandset configurations selected for the multispectral camera enabled the calculation of several traditional narrowband vegetation indices (NDVI, TCARI/OSAVI and PRI), which were linked to biophysical parameters using quantitative methods based on physical approaches such as PROSPECT, SAILH, and FLIGHT models. The high spatial, spectral and temporal resolution provided at high turnaround times, make this platform particularly suitable for a number of applications, including precision farming or irrigation scheduling, where time-critical management is required. Financial support from the Spanish Ministry of Science and Innovation (MCI) for the projects AGL2005-04049, EXPLORA INGENIO AGL2006-26038-E/AGR, CONSOLIDER CSD2006-67, and AGL2003-01468 is gratefully acknowledged and in-kind support provided by Bioiberica through the project PETRI PET2005-0616. Technical support from UAV Navigation and Tetracam Inc. is also acknowledged. A. Vera, D. Notario, G. Sepulcre-Cantó, M. Guillén, C. Trapero, I. Calatrava, and M. Ruiz Bernier are acknowledged for measurements and technical support in field and airborne campaigns. Berk, A.; Anderson, G.; Acharya, P.; Chetwynd, J.; Bernstein, L.; Shettle, E.; Matthew, M.; Adler-Golden, S. (1999) Modtran4 user's manual. Berni, J.; Zarco-Tejada, P.; Suarez, L.; Fererez, E. (2009) Thermal and narrow-band multispectral remote sensing for vegetation monitoring from an unmanned aerial vehicle. IEEE Transactions On Geoscience And Remote Sensing , 47, 722-738. Bouguet, J. (2001) Camera calibration toolbox for matlab. (accessed 15 Apr. 2009) Gamon, J.; Penuelas, J.; Field, C. (1992) A narrow-waveband spectral index that tracks diurnal changes in potosynthetic efficiency. Remote Sensing of Environment , 41, 35-44. Haboudane, D. and Miller, J. R. and Tremblay, N. and Zarco- Tejada, P. J. and Dextraze, L. (2002) Integrated narrow-band vegetation indices for prediction of crop chlorophyll content for application to precision agriculture. Remote Sensing Of Environment , 81, 416-426. Jacquemoud, S.; Baret, F. (1990) Prospect: a model of leaf optical properties spectra. Remote Sensing of Environment , 34, 75-91. Lowe, D. (2004) Distinctive image features from scale-invariant keypoints. Int. J. Comput. Vis. , 60, 91-110. North, P.R.J. (1996) Three-dimensional forest light interaction model using a montecarlo method. IEEE Transactions on Geosciences and Remote Sensing , 34, 946-956. Rondeaux, G.; Steven, M.; Baret, F. (1996) Optimization of soil-adjusted vegetation indices. Remote Sensing of Environment , 55(2), 95 − 107. Rouse JW, Haas RH, Schell JA, Deering DW, Harlan JC (1974) Monitoring the vernal advancements and retrogradation of natural vegetation. In: MD UG, editor. NASA/GSFS final report. . p. 371. Suárez, L.; Zarco-Tejada, P.; Berni, J.; González-Dugo, V.; Fereres, E. (2009) Modelling PRI for water stress detection using radiative transfer models. Remote Sensing of Environment , 113, 730-744. Verhoef, W. (1984) Light scattering by leaf layers with application to canopy reflectance modeling: the sail model. Remote Sensing of Environment , 16, 125-141. Zarco-Tejada, P.; Miller, J.; Morales, A.; Berjon, A.; Aguera, J. (2004) Hyperspectral indices and model simulation for chlorophyll estimation in open-canopy tree crops. Remote Sensing Of Environment , 90, ...

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