Primer sequences used for gene expression analysis

Primer sequences used for gene expression analysis

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A breakdown in vascular integrity and excessive inflammation are hallmarks of serious pathological conditions including sepsis, acute respiratory distress syndrome (ARDs) and most recently, severe COVID-19. FK506 binding protein like (FKBPL) is a member of the immunophilin protein superfamily with potent anti tumor activity through inhibition of an...

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... expression was determined by quantitative reverse transcription PCR (qPCR). Gene specific primers (Table 1; IDT, USA) were diluted 1/10 from stock 100 μM concentrations and PCR reaction was completed using a 7500 real time PCR system (ThermoFisher, USA) and Sybr Green (Invitrogen, Ireland). Changes in expression of genes of interest from untreated cells, or treatments were quantified by fold change-ΔΔCT from housekeeping genes β-Actin and GADPH (2-∆∆Ct). . ...
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... copyright holder for this preprint this version posted February 25, 2021. ;https://doi.org/10.1101https://doi.org/10. /2021 Mouse GCGACATACTCAAGCAGGA GCA AGTGGTAACCGCTCAGGTGTT G IL-6 Mouse TACCACTTCACAAGTCGGAG GC CTGCAAGTGCATCATCGTTGTT C IL-1β Mouse TGGACCTTCCAGGATGAGGA CA GTTCATCTCGGAGCCTGTAGT G IL-1β Human CCACAGACCTTCCAGGAGA ATG GTGCAGTTCAGTGATCGTACA GG IL-6 Mouse TACCACTTCACAAGTCGGAG GC CTGCAAGTGCATCATCGTTGTT C . CC-BY-NC-ND 4.0 International license available under a (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is ...
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... list of phenotypes which met the traditional genome-wide association study (GWAS) significance threshold of p<= 5x10 -8 was compiled. The information obtained included the log fold change, average expression, P value and adjusted P value for each series (Supplementary Table 1). ...
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... p=0.0314; n=6), IL-18 expression (rFKBPL p=0.0292; n=6); NFKB1 (AD-01, p=0.0239 rFKBPL, p=0.0185; n=5), COX2 (AD-01, p=0.0064 rFKBPL, p=0.0185; n=5) and IL-6 (rFKBPL, p=0.0439; n=5) ( Fig. 4E.). Similarly, in THP-1 human monocyte cell line, AD-01 (1 nM) significantly reduced mRNA expression of tnf, Il-β, Il-18, nlrp3, nfkb1 and casp1 following 6 h stimulation with LPS (1000 ng/ml) ( Supplementary Fig. 4). ...
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... https://doi.org/10. 1101/2021 (Supplementary Table 1). We used molecular modelling to predict any potential changes in structure from the missense SNPs, rs28732176 and rs35580488 using the Robetta server (45). ...

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