Box plot of the concentration, expressed in log CFU per milliliter, of all STEC strains after 7 h of enrichment in the five enrichment media, subdivided by type of stress applied. The line within the box marks the median. The boundaries of the box represent the 25th and 75th percentiles. The upper and lower adjacent values are calculated as defined by Tukey (29). Significant differences ( P , 0.05) are indicated with a different letter. BPW, buffered peptone water; BPWp, buffered peptone water plus sodium pyruvate; mTSB, modified tryptic soy broth; SEB, Shiga toxin–producing E. coli enrichment broth . 

Box plot of the concentration, expressed in log CFU per milliliter, of all STEC strains after 7 h of enrichment in the five enrichment media, subdivided by type of stress applied. The line within the box marks the median. The boundaries of the box represent the 25th and 75th percentiles. The upper and lower adjacent values are calculated as defined by Tukey (29). Significant differences ( P , 0.05) are indicated with a different letter. BPW, buffered peptone water; BPWp, buffered peptone water plus sodium pyruvate; mTSB, modified tryptic soy broth; SEB, Shiga toxin–producing E. coli enrichment broth . 

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The purpose of this study was to evaluate (i) the behavior of several strains of non-O157 Shiga toxin-producing Escherichia coli (STEC) serogroups (O26, O103, O111, and O145) exposed to different stress conditions and (ii) the growth dynamics of stressed and nonstressed non-O157 STEC cells in five enrichment media. STEC strains were exposed to acid...

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Context 1
... coli is present in the natural intestinal microbiota of mammals and in a variety of habitats, including soil, water, sediment, and food. Within the species, some strains of E. coli can cause human diseases. The most severe of these E. coli are linked to strains belonging to the pathogenic group of the Shiga toxin– producing E. coli (STEC) (5, 27) . This group was first recognized in 1982 in patients with hemorrhagic colitis and was consequently named enterohemorrhagic E. coli (36) . The causative agent responsible was STEC serogroup O157:H7. This serogroup is characterized by several virulence genes, such as Shiga toxin genes stx 1 and stx 2 and the eae gene encoding an intimin. The symptoms range from nonbloody diarrhea, hemorrhagic colitis, and hemo- lytic uremic syndrome to thrombotic thrombocytopenic purpura. STEC O157:H7 remains the most common serogroup within the STEC group. The development of a detection and isolation method has therefore been targeted to this serogroup, resulting in the widely accepted standard ISO 16654:2001, which is based on the inability of most O157:H7 strains to ferment sorbitol (15) . However, non- O157 STEC strains are being increasingly recognized and reported as important foodborne pathogens worldwide. In Europe, the most frequently isolated non-O157 serotypes belong to the serogroups O26, O91, O103, O111, and O145 (9, 19, 22, 34) . Because the above-mentioned method for the detection and isolation of O157:H7 fails to detect these serogroups, a new method should be formulated to detect and isolate non-O157 STEC serogroups in a broad variety of matrices. In matrices such as foodstuffs, low numbers of STEC cells may have a large impact on public health and are often found in the presence of high numbers of closely related competitor organisms. Therefore, before any isolation step can be performed, a suitable initial enrichment step is required. This step should ensure the growth of STEC cells while inhibiting that of the competitor organisms. In addition, it should be taken into account that STEC cells are often impaired by sublethal injuries sustained during food processing and storage (e.g., exposure to salt, acid, cold, heat, and freeze stresses). Despite the common occurrence of these stresses, little information is available concerning the growth of non-O157 STEC after exposure to the various physical and chemical stresses present in foods (25) . A better understanding of the influence of stress types such as acid, cold, and freeze on the growth of non-O157 STEC strains compared with nonstressed cells is needed. Furthermore, injured cells may become susceptible to selective agents included in enrichment media. Consequently, these media might be insufficient to resuscitate injured or stressed cells during the enrichment phase, possibly resulting in false-negative results. The selection of a suitable enrichment medium that facilitates the isolation and confirmation of STEC in foods is of great importance (2, 5, 18) . Several enrichment media are now commonly in use. The International Organization for Standardization recommends the use of modified tryptic soy broth with the addition of novobiocin (16 mg/liter) or acriflavin (12 mg/liter) for the enrichment of food samples and dairy products, respectively (in TS 13136:2012). For the enrichment of stressed bacteria, buffered peptone water (BPW) is recommended (5, 16) . Although the International Organization for Standardization/ Technical Specification specifies an enrichment period of 18 to 24 h, multiple studies have proven the advantageous effect of a shorter enrichment period. This may be owing to overgrowth of competing organisms and the release of PCR- inhibiting organic components during overnight incubation (14, 17, 31) . The purpose of this study was to compare the growth dynamics of several pure cultures of non-O157 STEC strains in five enrichment media developed for the enrichment of members of the Enterobacteriaceae, including E. coli and coliforms, STEC, and other gram-negative pathogens from food samples. The following enrichment media were evaluated: modified tryptic soy broth (mTSB) as described by Doyle and Schoeni ( 6 ), which differs from TSB by the addition of bile salts and phosphate buffer; BPW with and without the addition of sodium pyruvate (35) ; and two selective enrichment media, i.e., Brila and STEC enrichment broth (SEB). In summary, the aims of the present study were to (i) determine the effect of acid, cold, and freeze stresses on strains belonging to non-O157 STEC serogroups and (ii) compare the capabilities of five enrichment media to resuscitate these stressed bacteria. conditions. The effect of plating nonstressed STEC cells on a selective isolation medium was investigated. No significant difference was observed between the counts of all strains on nonselective TSA and selective TBX media ( P . 0.05) (data not shown). The selective components in TBX did not inhibit the growth of nonstressed STEC cells. Table 2 shows that cold and freeze stresses caused lethal injuries in all strains tested, although strain variations were observed. Furthermore, the percentage of lethally injured cells was, on average, higher after freeze stress compared with cold stress. In contrast to cold and freezing, acid stress did not cause lethal injury for the majority of strains. Considering the percentage of sublethally (stressed) cells, acid stress generally had the least influence. Freeze stress caused, on average, the most sublethally injured cells (89.1% 6 8.8%) (Table 2). Growth in different enrichment media. After an enrichment period of 7 h, the highest counts were observed in BPW, regardless of the type of stress applied ( P , 0.05) (Fig. 1). All stressed strains grew in this 7-h period above 3 log CFU/ml, except for a few freeze-stressed STEC strains grown on mTSB, Brila, and SEB. After 24 h of enrichment, regardless of the enrichment medium, strain, or type of stress, all counts varied between 8.26 and 9.11 log CFU/ml. Enrichment in BPW and BPWp showed no significant differences in duration of the lag phase for nonstressed, acid- stressed, and freeze-stressed cells ( P . 0.05) (Fig. 2). However, resuscitation of cold-stressed cells in BPWp significantly prolonged the lag phase ( P , 0.01) compared with the lag phase in BPW. A significantly shorter lag phase was demonstrated after freeze stress in BPW and BPWp compared to that in the enrichment media mTSB, Brila, and SEB ( P , 0.001). A significantly lower maximum growth rate was observed during enrichment on BPWp after cold ( P , 0.05) and freeze ( P , 0.05) stresses than on BPW (Fig. 3). After acid stress, the SEB enrichment showed a significant longer lag phase than all other media ( P , 0.05) and a significantly lower maximum growth rate compared with BPW and BPWp ( P , 0.05). Moreover, the maximum growth rate was significantly lower on SEB during enrichment of nonstressed cells compared with rates on BPW and Brila ( P , 0.05). The effect of stress on the growth of E. coli O157:H7 is well documented; however, it cannot be assumed that non- O157 STEC strains will behave similarly to O157:H7 strains when exposed to the same stress conditions. The acid tolerance observed in the present study has already been described in multiple studies on O157:H7 and non-O157 serogroups (25, 32) . To take advantage of this feature, an acid treatment procedure to inhibit the growth of competitor organisms can be used as a preliminary selective step before the isolation. Multiple studies have shown the usefulness of this procedure (10, 11, 28) . The observed acid tolerance in the present study was comparable to that in the study of Jasson et al. (18) using the same stress conditions, but their work focused on O157:H7 strains. In our study, some strain variations were observed within the STEC serogroups. These findings support the statement of Benjamin and Datta (3) that the ability of STEC to survive in an acidic environment depends on the strain and not on a ...
Context 2
... in different enrichment media. After an enrichment period of 7 h, the highest counts were observed in BPW, regardless of the type of stress applied (P , 0.05) (Fig. 1). All stressed strains grew in this 7-h period above 3 log CFU/ml, except for a few freeze-stressed STEC strains grown on mTSB, Brila, and SEB. After 24 h of enrichment, regardless of the enrichment medium, strain, or type of stress, all counts varied between 8.26 and 9.11 log ...
Context 3
... might imply that these pathogens do not all succumb to the freeze stress to which they were exposed. A sufficient number of cells remain viable enough to pose a health threat (1, 8). Therefore, resuscitation in a suitable enrichment medium before isolation is essential to avoid false-negative test results (18). ...

Citations

... The enrichment is usually done in a static way, the addition of a stirring step followed by a reduction of the enrichment time could be an improvement. Indeed, it would reduce the development of Clostridium and promote the growth of STEC (Hallewell et al. 2017;Kang et al. 2021;Verhaegen et al. 2015;Zhou et al. 2011). ...
... Nevertheless, the results obtained with the IMS as well as with a direct spread of the enrichment on agar medium showed that the choice of agars is a real challenge. Although our study showed equivalent performance between TBX and CHRO-MAgar STEC and CHROMAgar O157, we consider the use in parallel, of one selective agar and one non-selective agar can bring benefits to the cultural isolation step (Hirvonen, Siitonen, et Kaukoranta 2012;Jenkins et al. 2020;Verhaegen et al. 2015). Indeed, it has been demonstrated that Chro-mAgar agars were selective and allowed to reduce considerably the annexed flora especially for plants, which allows to save time on latex test (Delbeke et al. 2015;Gouali et al. 2013;Kalule, Keddy, et Nicol 2018;Kanki, Seto, et Kumeda 2014;Lewis, Cernicchiaro, et Moxley 2020;Tzschoppe, Martin, et Beutin 2012). ...
Article
Full-text available
The aims of this study were (i) to evaluate the performance of the Assurance® GDS method combining immunomagnetic separation and real-time PCR for STEC detection in pooled samples (up to 375g) of vegetables and meat, and (ii) to compare its performances to that of the reference method ISO/TS-13136:2012 (25 g sample size) in artificially contaminated samples. The alternative Assurance® GDS method includes enrichment in proprietary broth at 41.5°C for 10 h followed by primary screening of TOP 7 STEC containing eae, stx genes and O157:H7 markers using MPX-Top 7 (IMS+PCR), secondary screening for serogroup identification using MPX-ID/EHEC-ID (IMS+PCR). And finally, cultural confirmation from same IMS beads on two selective agars is set up. For reference method, the enrichment was performed in BPW at 41.5°C for 18 h. A total of 120 samples of meat and vegetables, including 20 uninoculated and 100 samples spiked with stressed cells (<12 CFU/25 or 375g) of STEC, were analyzed using both methods. Our results showed that the Assurance® GDS method LOD50 ranged from 0.12 CFU/375 to 0.522 CFU/375 g and the LOD95 from 0.518 CFU/375 to 2.257 CFU/375 g. These data are similar to the LOD50 data of the reference method.
... The diverse sublethal injury on different strains have also been reported in HHP-stressed L. innocua CIP80.11 T and23/2013 (Nasiłowska, et al. 2019), lactic acid-stressed L. monocytogenes ScottA and EGDe (Siderakou, et al. 2021) and freeze-stressed E. coli O26, O103, O111 and O145 (Verhaegen, et al. 2015). ...
... Shi et al. (2017) employed TSB, LB and minimal A medium (minA) to repair lactic acidinjured E. coli O157:H7 and K-12, and the highest recovery ratio was obtained in TSB, the nutritionally richest medium. Similar results were also observed in SAEW-injured L. monocytogenes or E. coli (Lan, et al. 2019), HPCD-injured E. coli O157:H7 (Bi, et al. 2015), freezing-injured E. coli (Verhaegen, et al. 2015;Zhang, et al. 2021) and ohmic heatinginjured S. aureus (Shao, et al. 2022). Lan et al. (2019) reported that SAEW-injured L. monocytogenes completely repaired in TSB-yeast extract within 60 min at 37 ℃, while 100 % of recovery ratio was not achieved in minA or TSB for 60 min under the same temperature. ...
Article
Sublethally injured state has been recognized as a survival strategy for microorganisms suffering from stressful environments. Injured cells fail to grow on selective media but can normally grow on nonselective media. Numerous microorganism species can form sublethal injury in various food matrices during processing and preservation with different techniques. Injury rate was commonly used to evaluate sublethal injury, but mathematical models for the quantification and interpretation of sublethally injured microbial cells still require further study. Injured cells can repair themselves and regain viability on selective media under favorable conditions when stress is removed. Conventional culture methods might underestimate microbial counts or present a false negative result due to the presence of injured cells. Although the structural and functional components may be affected, the injured cells pose a great threat to food safety. This work comprehensively reviewed the quantification, formation, detection, resuscitation and adaption of sublethally injured microbial cells. Food processing techniques, microbial species, strains and food matrix all significantly affect the formation of sublethally injured cells. Culture-based methods, molecular biological methods, fluorescent staining and infrared spectroscopy have been developed to detect the injured cells. Cell membrane is often repaired first during resuscitation of injured cells, meanwhile, temperature, pH, media and additives remarkably influence the resuscitation. The adaption of injured cells negatively affects the microbial inactivation during food processing.
... Enrichment has been extensively used in multiple microbiological protocols as an amplification step to increase the chances of foodborne pathogen detection in food samples. Verhaegen et al. (29) reported that BPW worked better to enrich stressed Shiga toxin-producing E. coli (STEC) than other broth media they tested, including TSB. This is in contrast with our results of better performance in reaching larger numbers with TSB for flour. ...
Article
Full-text available
Enterohemorrhagic Escherichia coli (EHEC) and Salmonella are of serious concern in low-moisture foods, including wheat flour and its related products, causing illnesses, outbreaks, and recalls. The development of advanced detection methods based on molecular principles of analysis is essential to incorporate into interventions intended to reduce the risk from these pathogens. In this work, a quasimetagenomic method based on real-time sequencing analysis and assisted by magnetic capture and DNA amplification was developed. This protocol is capable of detecting multiple Salmonella and/or E. coli organisms in the sample within less than a day, and it can also generate sufficient whole-genome sequences of the target organisms suitable for subsequent bioinformatics analysis. Multiplex detection and identification were accomplished in less than 20 h and additional whole-genome analyses of different nature were attained within 36 h, in contrast to the several days required in previous sequencing pipelines.
... In this study, we evaluated different detection and isolation procedures for STEC from food, using qPCR detection in combination with isolation using different enrichment and selective media. The selected enrichment and isolation media have been previously evaluated using pure cultures (Verhaegen et al., 2015a(Verhaegen et al., , 2015b. Furthermore, the use of an acid treatment procedure prior to streaking onto the selective isolation media was compared to direct streaking for isolation of STEC from artificially and naturally contaminated food samples. ...
... Currently, the International Organization for Standardization (ISO) recommends the use of buffered peptone water (BPW) as enrichment medium when the bacteria may have undergone stress conditions (International Organization for Standardization (ISO), 2012). Verhaegen et al. (2015b) evaluated several enrichment media using pure STEC cultures and confirmed better growth dynamics in BPW compared to more selective enrichment media, such as Brila broth. However, in the present study the qPCR Ct values of artificially inoculated food samples enriched in Brila broth were significantly lower compared to BPW for all four matrices, indicating a better growth of the STEC cells during enrichment in Brila broth. ...
Article
Full-text available
Shiga toxin-producing Escherichia coli (STEC) remains a major foodborne pathogen of concern across the globe. Rapid detection and isolation of this pathogen is of great importance for public health reasons. In this study the detection and isolation of four non-O157 STEC strains (O26, O103, O111, O145) from different artificially contaminated matrices, namely ground (minced) beef, cattle carcass swab, lettuce mix and sprouted soy beans, were evaluated. Low amounts of STEC were used (0.25-1.40cfu/g) to spike the samples. All samples were enriched in parallel in Buffered Peptone Water (BPW) and Brila broth. After enrichment, detection was performed using real-time PCR (qPCR), and isolation using two chromogenic agar media, CHROMagar™ STEC and ChromID™ EHEC. Inoculation on the agar media was performed either directly after enrichment or after the use of an acid treatment procedure. Furthermore, the use of this procedure was also tested on naturally contaminated food products, using 150 stx-positive samples. Although the qPCR Cycle Threshold (Ct) values were lower after enrichment in Brila broth, no significant differences in recovery were observed between both enrichment broths. Both agar media were equally suitable for the isolation of STEC, although a significantly higher recovery was obtained when using both agar media in parallel. For samples with a Ct value above 25, an acid treatment step prior to isolation ensured a significant improvement in the recovery of STEC due to the reduction in background microbiota. This acid treatment procedure proved especially useful for the isolation of STEC from sprouted soy bean samples.
Preprint
Full-text available
The aims of this study were (i) to evaluate the performance of the Assurance® GDS method combining immunomagnetic separation and Real Time PCR for STEC detection in pooled samples (up to 375g) of vegetables and meat and (ii) to compare its performances to that of the reference method ISO/TS-13136:2012 (25 g sample size) in artificially contaminated samples. The alternative Assurance® GDS method includes enrichment in proprietary broth at 41.5ºC for 10 h followed by primary screening of TOP 7 STEC containing eae, stx genes and O157:H7 markers using MPX-Top 7 (IMS+PCR), secondary screening for serogroup identification using MPX-ID/EHEC-ID (IMS+PCR). And finally, cultural confirmation from same IMS beads on two selective agars is set up. For reference method, the enrichment was performed in BPW at 41.5ºC for 18 h. A total of 120 samples of meat and vegetables, including 20 uninoculated and 100 samples spiked with stressed cells (<12 CFU/25 or 375g) of STEC, were analyzed using both methods. Our results showed that the Assurance® GDS method LOD50 ranged from 0.12 CFU/375 g to 0.522 CFU/375 g and the LOD95 from 0.518 CFU/375 g to 2.257 CFU/375 g. These data are similar to the LOD50 data of the reference method.
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Bacillus cereus, Listeria monocytogenes, and Staphylococcus aureus caused problems in public health and food safety. A multiplex real‐time PCR (qPCR) for simultaneous detection of these three pathogens in different kinds of food was developed. A high specificity (100%) was obtained using 21 target strains and 19 nontarget strains. Standard curves for pure cultures covered seven orders of magnitude (from 10⁸ to 10² cfu/ml) with high amplification efficiencies ranging from 94.2 to 105.4% with R‐squares over 0.999. When multiplex qPCR was applied for artificially contaminated cherry tomato, milk, and spam samples, a detection limit of 10³ cfu/g or ml was obtained for these three bacteria. When low levels (0.4–5.5 cfu/25 g or ml) of bacteria were inoculated in three kinds of food samples and cultured in tryptic soy broth for 24 hr, results obtained from multiplex real‐time and conventional culture methods were not significantly different for all three food matrices based on Mantel–Haenszel chi‐square test. Only for B. cereus in milk, positive portions detected by qPCR were significantly higher than those detected by culture method. Hence, the multiplex qPCR developed in this study is highly specific and effective for simultaneous detection B. cereus, L. monocytogenes, and S. aureus in food samples. Practical applications Bacillus cereus, Listeria monocytogenes, and Staphylococcus aureus are three major foodborne pathogens and have been found in a wide range of foods. We developed a multiplex qPCR specific targeting groEL, iap, and nuc genes with a high amplification efficiency. Different food samples (cherry tomato, milk, and spam) were tested for evaluating the performance of the multiplex qPCR. The detection results by qPCR were compared with the conventional culture methods and no significant differences were found using Mantel–Haenszel chi‐square test. This study provides the information of the developed multiplex qPCR for detecting three specific foodborne pathogens and applications in food samples, which will be helpful for further studies about simultaneous detection of several targets in food samples using multiplex PCR.