Figure 3 - uploaded by Ayaz Ahmad
Content may be subject to copyright.
(A) Homology model for kappa casein (B) Superposition of target (magenta) and template (cyan).  

(A) Homology model for kappa casein (B) Superposition of target (magenta) and template (cyan).  

Source publication
Article
Full-text available
Kappa casein protein belong to phosphoprotein’s casein family which contribute 80% of milk protein comprise of αS1, αS2, β-casein and κ-casein. Kappa casein gene (CNS3) is highly conserved in mammalian species and show variation containing 1997 base pairs. Kappa-casein involved in vital physiological processes. Along with the stabilizing coagulum b...

Contexts in source publication

Context 1
... modeling, energy of structure was minimized to 0.05 Gradient by using Force field AMBER99 which is parameterized for proteins and nucleic acids and is not suitable for small molecules. The generated structure ( Figure 3A) was saved in PDB format with suitable name. The generated model was superimposed on template structure with root mean square deviation (RMSD) of 1.242 angstroms showing a close homology ( Figure 3B) using chimera version 1.7. ...
Context 2
... generated structure ( Figure 3A) was saved in PDB format with suitable name. The generated model was superimposed on template structure with root mean square deviation (RMSD) of 1.242 angstroms showing a close homology ( Figure 3B) using chimera version 1.7. ...

Similar publications

Article
Full-text available
Kappa casein protein belong to phosphoprotein's casein family which contribute 80% of milk protein comprise of αS1, αS2, β-casein and κ-casein. Kappa casein gene (CNS3) is highly conserved in mammalian species and show variation containing 1997 base pairs. Kappa-casein involved in vital physiological processes. Along with the stabilizing coagulum b...